RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C HPC2Q01448 625 aa4.06□□□□□ -1.76
SOK2YMR016C BRL1P38770 471 aa4.06□□□□□ -1.76
SOK2YMR016C ALA1P40825 983 aaKnown RBP4.06□□□□□ -1.76
SOK2YMR016C SUM1P46676 1062 aa4.06□□□□□ -1.76
SOK2YMR016C TY1A-DR3Q12441 440 aa4.06□□□□□ -1.76
SOK2YMR016C GUA1P38625 525 aaKnown RBP4.05□□□□□ -1.76
SOK2YMR016C RPN1P38764 993 aaKnown RBP4.05□□□□□ -1.76
SOK2YMR016C ISF1P32488 338 aa4.05□□□□□ -1.76
SOK2YMR016C NRD1P53617 575 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SOK2YMR016C YMR187CQ03236 431 aa4.05□□□□□ -1.76
SOK2YMR016C SBP1P10080 294 aaKnown RBP4.04□□□□□ -1.76
SOK2YMR016C FPS1P23900 669 aa4.04□□□□□ -1.76
SOK2YMR016C SKN7P38889 622 aa4.04□□□□□ -1.76
SOK2YMR016C JJJ2P46997 583 aa4.04□□□□□ -1.76
SOK2YMR016C DMA2P53924 522 aa4.04□□□□□ -1.76
SOK2YMR016C UTP7P40055 554 aaKnown RBP4.04□□□□□ -1.76
SOK2YMR016C YNR014WP53719 212 aa4.04□□□□□ -1.76
SOK2YMR016C TDA6Q06466 467 aa4.04□□□□□ -1.76
SOK2YMR016C IRE1P32361 1115 aa4.03□□□□□ -1.76
SOK2YMR016C MCX1P38323 520 aaPredicted RBP4.03□□□□□ -1.76
SOK2YMR016C HAL5P38970 855 aaKnown RBP4.03□□□□□ -1.76
SOK2YMR016C SLX8P40072 274 aa4.03□□□□□ -1.76
SOK2YMR016C GPM1P00950 247 aaKnown RBP4.02□□□□□ -1.77
SOK2YMR016C MET1P36150 593 aa4.02□□□□□ -1.77
SOK2YMR016C SBE2P42223 864 aaKnown RBP4.02□□□□□ -1.77
SOK2YMR016C RPP1AP05318 106 aaPredicted RBP4.02□□□□□ -1.77
SOK2YMR016C SOH1P38633 127 aa4.02□□□□□ -1.77
SOK2YMR016C YDJ1P25491 409 aaKnown RBP4.01□□□□□ -1.77
SOK2YMR016C HDA3Q06623 655 aa4.01□□□□□ -1.77
SOK2YMR016C MON2P48563 1636 aaPredicted RBP4□□□□□ -1.77
SOK2YMR016C MRPL16P38064 232 aa3.99□□□□□ -1.77
SOK2YMR016C BOI2P39969 1040 aa3.99□□□□□ -1.77
SOK2YMR016C TFB3Q03290 321 aa3.99□□□□□ -1.77
SOK2YMR016C PDC6P26263 563 aaKnown RBP3.98□□□□□ -1.77
SOK2YMR016C KNS1P32350 737 aaPredicted RBP3.98□□□□□ -1.77
SOK2YMR016C SHM1P37292 490 aaPredicted RBP3.98□□□□□ -1.77
SOK2YMR016C PSH1Q12161 406 aa3.98□□□□□ -1.77
SOK2YMR016C STB3Q12427 513 aa3.98□□□□□ -1.77
SOK2YMR016C YFL034WP43564 1073 aa3.97□□□□□ -1.77
SOK2YMR016C SUP45P12385 437 aaKnown RBP3.97□□□□□ -1.77
SOK2YMR016C PDC5P16467 563 aaKnown RBP3.96□□□□□ -1.78
SOK2YMR016C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SOK2YMR016C BIO2P32451 375 aa3.96□□□□□ -1.78
SOK2YMR016C YTA6P40328 754 aa3.96□□□□□ -1.78
SOK2YMR016C YPQ2Q06328 317 aa3.96□□□□□ -1.78
SOK2YMR016C YDR215CQ12240 137 aa3.96□□□□□ -1.78
SOK2YMR016C YCK2P23292 546 aaKnown RBP3.95□□□□□ -1.78
SOK2YMR016C SPR3P41901 512 aa3.95□□□□□ -1.78
SOK2YMR016C LEU1P07264 779 aaKnown RBP3.95□□□□□ -1.78
SOK2YMR016C SWI5P08153 709 aa3.95□□□□□ -1.78
SOK2YMR016C MCM1P11746 286 aa3.95□□□□□ -1.78
SOK2YMR016C AIM9P40053 627 aaKnown RBP3.95□□□□□ -1.78
SOK2YMR016C ENO2P00925 437 aaKnown RBP3.94□□□□□ -1.78
SOK2YMR016C TAT1P38085 619 aa3.94□□□□□ -1.78
SOK2YMR016C YNL108CP53929 270 aa3.94□□□□□ -1.78
SOK2YMR016C TY1A-DR2Q03964 440 aaKnown RBP3.94□□□□□ -1.78
SOK2YMR016C RPS31P05759 152 aaKnown RBP3.93□□□□□ -1.78
SOK2YMR016C PKC1P24583 1151 aa3.93□□□□□ -1.78
SOK2YMR016C RIM21P48565 533 aa3.93□□□□□ -1.78
SOK2YMR016C RPS6AP0CX37 236 aaKnown RBP3.92□□□□□ -1.78
SOK2YMR016C RPS6BP0CX38 236 aaPredicted RBP3.92□□□□□ -1.78
SOK2YMR016C AMN1P38285 549 aaPredicted RBP3.92□□□□□ -1.78
SOK2YMR016C RGP1P16664 663 aa3.92□□□□□ -1.78
SOK2YMR016C LSB6P42951 607 aa3.92□□□□□ -1.78
SOK2YMR016C SLN1P39928 1220 aaPredicted RBP3.91□□□□□ -1.78
SOK2YMR016C HEH2Q03281 663 aa3.91□□□□□ -1.78
SOK2YMR016C NTH2P35172 780 aa3.9□□□□□ -1.79
SOK2YMR016C ALD2P47771 506 aa3.9□□□□□ -1.79
SOK2YMR016C GLT1Q12680 2145 aaKnown RBP3.89□□□□□ -1.79
SOK2YMR016C TPS3P38426 1054 aaKnown RBP3.89□□□□□ -1.79
SOK2YMR016C MSC7P38694 644 aa3.89□□□□□ -1.79
SOK2YMR016C HGH1P48362 394 aaKnown RBP3.89□□□□□ -1.79
SOK2YMR016C MCA1Q08601 432 aa3.89□□□□□ -1.79
SOK2YMR016C RDS2P19541 446 aaKnown RBP3.88□□□□□ -1.79
SOK2YMR016C TSC13Q99190 310 aa3.88□□□□□ -1.79
SOK2YMR016C NHA1Q99271 985 aa3.88□□□□□ -1.79
SOK2YMR016C MAC1P35192 417 aa3.88□□□□□ -1.79
SOK2YMR016C YPL034WQ03083 165 aa3.88□□□□□ -1.79
SOK2YMR016C MLF3P32047 452 aa3.87□□□□□ -1.79
SOK2YMR016C PRY1P47032 299 aa3.87□□□□□ -1.79
SOK2YMR016C YJL007CP47080 104 aa3.87□□□□□ -1.79
SOK2YMR016C YNL165WP53891 406 aa3.87□□□□□ -1.79
SOK2YMR016C CYT1P07143 309 aa3.87□□□□□ -1.79
SOK2YMR016C NAB2P32505 525 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SOK2YMR016C UTP4Q06679 776 aaKnown RBP3.87□□□□□ -1.79
SOK2YMR016C Q0182Q9ZZW1 134 aa3.87□□□□□ -1.79
SOK2YMR016C NCL1P38205 684 aaKnown RBP3.86□□□□□ -1.79
SOK2YMR016C ALG14P38242 237 aa3.86□□□□□ -1.79
SOK2YMR016C MRX10Q05648 414 aa3.86□□□□□ -1.79
SOK2YMR016C PDI1P17967 522 aaKnown RBP3.85□□□□□ -1.79
SOK2YMR016C RPL34BP40525 121 aaKnown RBP3.85□□□□□ -1.79
SOK2YMR016C PGM2P37012 569 aaKnown RBP3.84□□□□□ -1.79
SOK2YMR016C SKP1P52286 194 aa3.84□□□□□ -1.79
SOK2YMR016C MTO1P53070 669 aa3.84□□□□□ -1.79
SOK2YMR016C ENO1P00924 437 aaKnown RBP3.84□□□□□ -1.79
SOK2YMR016C SCD5P34758 872 aa3.84□□□□□ -1.79
SOK2YMR016C BUD9P53226 547 aa3.84□□□□□ -1.79
SOK2YMR016C PRK1P40494 810 aa3.83□□□□□ -1.8
SOK2YMR016C UBP1P25037 809 aa3.82□□□□□ -1.8
SOK2YMR016C RTG2P32608 588 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms