RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W UTP7P40055 554 aaKnown RBP3.55□□□□□ -1.84
CFT2YLR115W YPQ2Q06328 317 aa3.55□□□□□ -1.84
CFT2YLR115W YPR204WQ08995 1032 aa3.55□□□□□ -1.84
CFT2YLR115W MON2P48563 1636 aaPredicted RBP3.55□□□□□ -1.84
CFT2YLR115W SWI5P08153 709 aa3.54□□□□□ -1.84
CFT2YLR115W AIM9P40053 627 aaKnown RBP3.54□□□□□ -1.84
CFT2YLR115W RPL34BP40525 121 aaKnown RBP3.54□□□□□ -1.84
CFT2YLR115W HPF1Q05164 967 aa3.54□□□□□ -1.84
CFT2YLR115W SHM1P37292 490 aaPredicted RBP3.54□□□□□ -1.84
CFT2YLR115W TBS1P38114 1094 aa3.53□□□□□ -1.84
CFT2YLR115W TSC13Q99190 310 aa3.53□□□□□ -1.84
CFT2YLR115W JJJ2P46997 583 aa3.53□□□□□ -1.85
CFT2YLR115W RPS31P05759 152 aaKnown RBP3.52□□□□□ -1.85
CFT2YLR115W UBP15P50101 1230 aa3.52□□□□□ -1.85
CFT2YLR115W PDI1P17967 522 aaKnown RBP3.52□□□□□ -1.85
CFT2YLR115W ACS2P52910 683 aaKnown RBP3.52□□□□□ -1.85
CFT2YLR115W CUZ1P53899 274 aa3.52□□□□□ -1.85
CFT2YLR115W RPS6AP0CX37 236 aaKnown RBP3.51□□□□□ -1.85
CFT2YLR115W RPS6BP0CX38 236 aaPredicted RBP3.51□□□□□ -1.85
CFT2YLR115W NTH2P35172 780 aa3.51□□□□□ -1.85
CFT2YLR115W TTI1P36097 1038 aa3.51□□□□□ -1.85
CFT2YLR115W TRK2P28584 889 aa3.5□□□□□ -1.85
CFT2YLR115W IRE1P32361 1115 aa3.5□□□□□ -1.85
CFT2YLR115W SIS2P36024 562 aa3.5□□□□□ -1.85
CFT2YLR115W YGR035CP53222 116 aa3.5□□□□□ -1.85
CFT2YLR115W YNL165WP53891 406 aa3.5□□□□□ -1.85
CFT2YLR115W PHO87P25360 923 aa3.5□□□□□ -1.85
CFT2YLR115W KTR7P40504 517 aa3.5□□□□□ -1.85
CFT2YLR115W YFL034WP43564 1073 aa3.5□□□□□ -1.85
CFT2YLR115W TGL4P36165 910 aa3.49□□□□□ -1.85
CFT2YLR115W ROM1P53046 1155 aa3.49□□□□□ -1.85
CFT2YLR115W PSH1Q12161 406 aa3.49□□□□□ -1.85
CFT2YLR115W MCM1P11746 286 aa3.49□□□□□ -1.85
CFT2YLR115W GAL2P13181 574 aa3.49□□□□□ -1.85
CFT2YLR115W AHP1P38013 176 aaKnown RBP3.49□□□□□ -1.85
CFT2YLR115W ALA1P40825 983 aaKnown RBP3.49□□□□□ -1.85
CFT2YLR115W JJJ3P47138 172 aa3.49□□□□□ -1.85
CFT2YLR115W DIT1P21623 536 aa3.48□□□□□ -1.85
CFT2YLR115W PDC6P26263 563 aaKnown RBP3.48□□□□□ -1.85
CFT2YLR115W UBP1P25037 809 aa3.48□□□□□ -1.85
CFT2YLR115W DPH6Q12429 685 aa3.48□□□□□ -1.85
CFT2YLR115W CYT1P07143 309 aa3.47□□□□□ -1.85
CFT2YLR115W HAP4P14064 554 aa3.47□□□□□ -1.85
CFT2YLR115W CPS1P27614 576 aa3.47□□□□□ -1.85
CFT2YLR115W ALD2P47771 506 aa3.47□□□□□ -1.85
CFT2YLR115W LYS5P50113 272 aa3.47□□□□□ -1.85
CFT2YLR115W SYT1Q06836 1226 aa3.47□□□□□ -1.85
CFT2YLR115W PUP1P25043 261 aa3.47□□□□□ -1.85
CFT2YLR115W GAS4Q08271 471 aa3.47□□□□□ -1.85
CFT2YLR115W YDR461C-AQ2V2P7 80 aa3.46□□□□□ -1.86
CFT2YLR115W NGR1P32831 672 aaKnown RBP3.46□□□□□ -1.86
CFT2YLR115W ECM23Q02710 187 aa3.46□□□□□ -1.86
CFT2YLR115W LEU1P07264 779 aaKnown RBP3.45□□□□□ -1.86
CFT2YLR115W MLF3P32047 452 aa3.45□□□□□ -1.86
CFT2YLR115W SUV3P32580 737 aa3.45□□□□□ -1.86
CFT2YLR115W HXT5P38695 592 aa3.45□□□□□ -1.86
CFT2YLR115W SPR3P41901 512 aa3.45□□□□□ -1.86
CFT2YLR115W KRE33P53914 1056 aaKnown RBP3.45□□□□□ -1.86
CFT2YLR115W YMR265CQ03508 461 aaKnown RBP3.45□□□□□ -1.86
CFT2YLR115W MRPL16P38064 232 aa3.44□□□□□ -1.86
CFT2YLR115W CEM1P39525 442 aa3.44□□□□□ -1.86
CFT2YLR115W ADE12P80210 433 aaKnown RBP3.44□□□□□ -1.86
CFT2YLR115W Q0182Q9ZZW1 134 aa3.44□□□□□ -1.86
CFT2YLR115W NOB1Q08444 459 aaKnown RBP3.44□□□□□ -1.86
CFT2YLR115W INO80P53115 1489 aa3.43□□□□□ -1.86
CFT2YLR115W SPA2P23201 1466 aaKnown RBP3.43□□□□□ -1.86
CFT2YLR115W YML083CQ04526 418 aa3.43□□□□□ -1.86
CFT2YLR115W UTP4Q06679 776 aaKnown RBP3.43□□□□□ -1.86
CFT2YLR115W UBX7P38349 436 aa3.42□□□□□ -1.86
CFT2YLR115W MSC7P38694 644 aa3.42□□□□□ -1.86
CFT2YLR115W YFL066CP43538 392 aa3.42□□□□□ -1.86
CFT2YLR115W CAB1Q04430 367 aa3.42□□□□□ -1.86
CFT2YLR115W STB3Q12427 513 aa3.42□□□□□ -1.86
CFT2YLR115W MDJ1P35191 511 aa3.42□□□□□ -1.86
CFT2YLR115W TAF7Q05021 590 aa3.42□□□□□ -1.86
CFT2YLR115W RGP1P16664 663 aa3.41□□□□□ -1.86
CFT2YLR115W SCD5P34758 872 aa3.41□□□□□ -1.86
CFT2YLR115W SKP1P52286 194 aa3.41□□□□□ -1.86
CFT2YLR115W RPC31P17890 251 aa3.4□□□□□ -1.86
CFT2YLR115W VAN1P23642 535 aa3.4□□□□□ -1.86
CFT2YLR115W FPS1P23900 669 aa3.4□□□□□ -1.86
CFT2YLR115W GPM1P00950 247 aaKnown RBP3.4□□□□□ -1.87
CFT2YLR115W SSA4P22202 642 aaKnown RBP3.4□□□□□ -1.87
CFT2YLR115W RLF2Q12495 606 aa3.4□□□□□ -1.87
CFT2YLR115W CWC15Q03772 175 aaKnown RBP3.39□□□□□ -1.87
CFT2YLR115W TY1A-DR2Q03964 440 aaKnown RBP3.39□□□□□ -1.87
CFT2YLR115W YBR197CP38306 217 aa3.39□□□□□ -1.87
CFT2YLR115W ICP55P40051 511 aa3.39□□□□□ -1.87
CFT2YLR115W MTO1P53070 669 aa3.39□□□□□ -1.87
CFT2YLR115W SUB2Q07478 446 aaKnown RBP3.39□□□□□ -1.87
CFT2YLR115W TRS33Q99394 268 aa3.39□□□□□ -1.87
CFT2YLR115W NAB2P32505 525 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87 RIP-Chip
CFT2YLR115W TPS3P38426 1054 aaKnown RBP3.38□□□□□ -1.87
CFT2YLR115W YTA6P40328 754 aa3.38□□□□□ -1.87
CFT2YLR115W ALD4P46367 519 aaKnown RBP3.38□□□□□ -1.87
CFT2YLR115W CUS1Q02554 436 aaPredicted RBP3.38□□□□□ -1.87
CFT2YLR115W PUF6Q04373 656 aaKnown RBP3.38□□□□□ -1.87
CFT2YLR115W KAP122P32767 1081 aa3.38□□□□□ -1.87
CFT2YLR115W SBE2P42223 864 aaKnown RBP3.38□□□□□ -1.87
CFT2YLR115W AI1P03875 834 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms