RNA–Protein interactions for RNA: YLR103C

CDC45, Transcript of DNA replication initiation factor, yeast

Gene CDC45, Length 1,953 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC45	YLR103C	RRP46	P53256	223 aa	Predicted RBP	4.68	□□□□□ -1.66
CDC45	YLR103C	IOC4	Q04213	475 aa		4.68	□□□□□ -1.66
CDC45	YLR103C	ISU2	Q12056	156 aa		4.68	□□□□□ -1.66
CDC45	YLR103C	RRP5	Q05022	1729 aa	Known RBP	4.68	□□□□□ -1.66
CDC45	YLR103C	RPP0	P05317	312 aa	Known RBP	4.67	□□□□□ -1.66
CDC45	YLR103C	VPS27	P40343	622 aa	Known RBP	4.67	□□□□□ -1.66
CDC45	YLR103C	MPP10	P47083	593 aa	Known RBP	4.67	□□□□□ -1.66
CDC45	YLR103C	PRP5	P21372	849 aa	Predicted RBP	4.67	□□□□□ -1.66
CDC45	YLR103C	KIC1	P38692	1080 aa		4.67	□□□□□ -1.66
CDC45	YLR103C	PTC2	P39966	464 aa	Known RBP	4.67	□□□□□ -1.66
CDC45	YLR103C	CDC45	Q08032	650 aa		4.67	□□□□□ -1.66
CDC45	YLR103C	FKS3	Q04952	1785 aa		4.67	□□□□□ -1.66
CDC45	YLR103C	PSE1	P32337	1089 aa	Known RBP	4.66	□□□□□ -1.66
CDC45	YLR103C	AIM7	Q12156	149 aa		4.66	□□□□□ -1.66
CDC45	YLR103C	YRF1-2	P40105	1681 aa		4.66	□□□□□ -1.66
CDC45	YLR103C	RPO41	P13433	1351 aa	Known RBP	4.66	□□□□□ -1.66
CDC45	YLR103C	URB1	P34241	1764 aa	Known RBP	4.66	□□□□□ -1.66
CDC45	YLR103C	PDR1	P12383	1068 aa		4.65	□□□□□ -1.66
CDC45	YLR103C	GLC3	P32775	704 aa		4.65	□□□□□ -1.66
CDC45	YLR103C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
CDC45	YLR103C	PRD1	P25375	712 aa		4.65	□□□□□ -1.67
CDC45	YLR103C	MSB3	P48566	633 aa	Predicted RBP	4.65	□□□□□ -1.67
CDC45	YLR103C	RGR1	P19263	1082 aa		4.64	□□□□□ -1.67
CDC45	YLR103C	SUI2	P20459	304 aa	Known RBP	4.64	□□□□□ -1.67
CDC45	YLR103C	FUN12	P39730	1002 aa	Known RBP	4.64	□□□□□ -1.67
CDC45	YLR103C	SLM3	Q12093	417 aa		4.64	□□□□□ -1.67
CDC45	YLR103C	RVB2	Q12464	471 aa	Known RBP	4.64	□□□□□ -1.67
CDC45	YLR103C	MVP1	P40959	511 aa	Known RBP	4.64	□□□□□ -1.67
CDC45	YLR103C	NOP2	P40991	618 aa	Known RBP	4.64	□□□□□ -1.67
CDC45	YLR103C	APC1	P53886	1748 aa		4.63	□□□□□ -1.67
CDC45	YLR103C	TPD3	P31383	635 aa		4.63	□□□□□ -1.67
CDC45	YLR103C	AKL1	P38080	1108 aa	Known RBP	4.63	□□□□□ -1.67
CDC45	YLR103C	SAP155	P43612	1002 aa		4.63	□□□□□ -1.67
CDC45	YLR103C	THI22	Q06490	572 aa		4.63	□□□□□ -1.67
CDC45	YLR103C	TCB1	Q12466	1186 aa		4.63	□□□□□ -1.67
CDC45	YLR103C	ENT1	Q12518	454 aa		4.62	□□□□□ -1.67
CDC45	YLR103C	DSD1	P53095	428 aa		4.62	□□□□□ -1.67
CDC45	YLR103C	CSC1	Q06538	782 aa		4.62	□□□□□ -1.67
CDC45	YLR103C	KIN1	P13185	1064 aa		4.61	□□□□□ -1.67
CDC45	YLR103C	HSP104	P31539	908 aa	Known RBP	4.61	□□□□□ -1.67
CDC45	YLR103C	XKS1	P42826	600 aa		4.61	□□□□□ -1.67
CDC45	YLR103C	YRB30	P53107	440 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC45	YLR103C	APP1	P53933	587 aa		4.61	□□□□□ -1.67
CDC45	YLR103C	RTT109	Q07794	436 aa		4.61	□□□□□ -1.67
CDC45	YLR103C	YRF1-4	O13559	1382 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	TFB4	Q12004	338 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	YRF1-3	P0CX14	1859 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	YRF1-7	P0CX15	1859 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	YRF1-6	P53819	1859 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	HEF3	P53978	1044 aa	Known RBP	4.6	□□□□□ -1.67
CDC45	YLR103C	ENV9	Q08651	330 aa		4.6	□□□□□ -1.67
CDC45	YLR103C	RSF2	P46974	1380 aa		4.59	□□□□□ -1.67
CDC45	YLR103C	YNL050C	P53952	270 aa		4.59	□□□□□ -1.67
CDC45	YLR103C	NTH2	P35172	780 aa		4.58	□□□□□ -1.68
CDC45	YLR103C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CDC45	YLR103C	AOS1	Q06624	347 aa		4.58	□□□□□ -1.68
CDC45	YLR103C	YRR1	Q12172	810 aa		4.58	□□□□□ -1.68
CDC45	YLR103C	SDH2	P21801	266 aa		4.58	□□□□□ -1.68
CDC45	YLR103C	ZDS1	P50111	915 aa	Known RBP	4.58	□□□□□ -1.68
CDC45	YLR103C	SIR4	P11978	1358 aa		4.57	□□□□□ -1.68
CDC45	YLR103C	RAD2	P07276	1031 aa		4.57	□□□□□ -1.68
CDC45	YLR103C	RRT14	P40470	206 aa		4.57	□□□□□ -1.68
CDC45	YLR103C	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
CDC45	YLR103C	RPP1B	P10622	106 aa	Known RBP	4.56	□□□□□ -1.68
CDC45	YLR103C	DAL5	P15365	543 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	YBR287W	P38355	427 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	FPR3	P38911	411 aa	Known RBP	4.56	□□□□□ -1.68
CDC45	YLR103C	GYP7	P48365	746 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	ATF2	P53296	535 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	YPR109W	Q06104	294 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	IMH1	Q06704	911 aa	Known RBP	4.56	□□□□□ -1.68
CDC45	YLR103C	BUD20	Q08004	166 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC45	YLR103C	CLB5	P30283	435 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	MAM1	P40065	302 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	STR2	P47164	639 aa		4.56	□□□□□ -1.68
CDC45	YLR103C	KCC4	P25389	1037 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	YKL133C	P36066	463 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	YIL092W	P40497	633 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	TEA1	P47988	759 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	ISM1	P48526	1002 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	MEC3	Q02574	474 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	SRC1	Q03707	834 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	INP54	Q08227	384 aa	Known RBP	4.55	□□□□□ -1.68
CDC45	YLR103C	TUM1	Q08686	304 aa	Known RBP	4.55	□□□□□ -1.68
CDC45	YLR103C	BMS1	Q08965	1183 aa	Known RBP	4.55	□□□□□ -1.68
CDC45	YLR103C	NUP145	P49687	1317 aa		4.55	□□□□□ -1.68
CDC45	YLR103C	RAS1	P01119	309 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	SIT4	P20604	311 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
CDC45	YLR103C	NIS1	P53939	407 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	ADE16	P54113	591 aa	Known RBP	4.54	□□□□□ -1.68
CDC45	YLR103C	NSE3	Q05541	303 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	UGA3	P26370	528 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	GUA1	P38625	525 aa	Known RBP	4.54	□□□□□ -1.68
CDC45	YLR103C	PEX21	P50091	288 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	FRK1	Q03002	865 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC45	YLR103C	SRT1	Q03175	343 aa		4.54	□□□□□ -1.68
CDC45	YLR103C	COQ4	O13525	335 aa		4.53	□□□□□ -1.68
CDC45	YLR103C	OSM1	P21375	501 aa	Known RBP	4.53	□□□□□ -1.68
CDC45	YLR103C	KTR1	P27810	393 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms