RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	RPS6A	P0CX37	236 aa	Known RBP	6.55	□□□□□ -1.36
SNL1	YIL016W	RPS6B	P0CX38	236 aa	Predicted RBP	6.55	□□□□□ -1.36
SNL1	YIL016W	YML082W	Q04533	649 aa	Known RBP	6.55	□□□□□ -1.36
SNL1	YIL016W	SWI5	P08153	709 aa		6.54	□□□□□ -1.36
SNL1	YIL016W	MET1	P36150	593 aa		6.54	□□□□□ -1.36
SNL1	YIL016W	STB3	Q12427	513 aa		6.54	□□□□□ -1.36
SNL1	YIL016W	DAT1	P13483	248 aa	Known RBP	6.53	□□□□□ -1.36
SNL1	YIL016W	BUD31	P25337	157 aa	Predicted RBP	6.53	□□□□□ -1.36
SNL1	YIL016W	NGR1	P32831	672 aa	Known RBP	6.53	□□□□□ -1.36
SNL1	YIL016W	YBR197C	P38306	217 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	FKH1	P40466	484 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	YJR107W	P47145	328 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	SVF1	Q05515	481 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	PUS5	Q06244	254 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	GYP1	Q08484	637 aa		6.53	□□□□□ -1.36
SNL1	YIL016W	UBP1	P25037	809 aa		6.52	□□□□□ -1.37
SNL1	YIL016W	NAP1	P25293	417 aa	Known RBP	6.52	□□□□□ -1.37
SNL1	YIL016W	ISC10	P32645	267 aa		6.52	□□□□□ -1.37
SNL1	YIL016W	OCA5	P38738	679 aa		6.52	□□□□□ -1.37
SNL1	YIL016W	TRS120	Q04183	1289 aa		6.52	□□□□□ -1.37
SNL1	YIL016W	UTR2	P32623	467 aa		6.51	□□□□□ -1.37
SNL1	YIL016W	FOX2	Q02207	900 aa	Known RBP	6.51	□□□□□ -1.37
SNL1	YIL016W	GPI13	Q07830	1017 aa		6.51	□□□□□ -1.37
SNL1	YIL016W	YTA7	P40340	1379 aa		6.51	□□□□□ -1.37
SNL1	YIL016W	EMW1	P42842	904 aa	Known RBP	6.5	□□□□□ -1.37
SNL1	YIL016W	NNF1	P47149	201 aa		6.5	□□□□□ -1.37
SNL1	YIL016W	ISU1	Q03020	165 aa		6.5	□□□□□ -1.37
SNL1	YIL016W	MCM2	P29469	868 aa		6.49	□□□□□ -1.37
SNL1	YIL016W	TBS1	P38114	1094 aa		6.49	□□□□□ -1.37
SNL1	YIL016W	SPR3	P41901	512 aa		6.49	□□□□□ -1.37
SNL1	YIL016W	IOC4	Q04213	475 aa		6.49	□□□□□ -1.37
SNL1	YIL016W	MNL2	Q12205	849 aa		6.49	□□□□□ -1.37
SNL1	YIL016W	SPT2	P06843	333 aa	Predicted RBP	6.48	□□□□□ -1.37
SNL1	YIL016W	RPT1	P33299	467 aa	Known RBP	6.48	□□□□□ -1.37
SNL1	YIL016W	PRE3	P38624	215 aa		6.48	□□□□□ -1.37
SNL1	YIL016W	FYV10	P40492	516 aa		6.48	□□□□□ -1.37
SNL1	YIL016W	SAS4	Q04003	481 aa		6.48	□□□□□ -1.37
SNL1	YIL016W	MAG2	Q06436	670 aa	Known RBP	6.48	□□□□□ -1.37
SNL1	YIL016W	AIR2	Q12476	344 aa	Known RBP	6.48	□□□□□ -1.37
SNL1	YIL016W	RPB10	P22139	70 aa		6.47	□□□□□ -1.37
SNL1	YIL016W	MKS1	P34072	584 aa		6.47	□□□□□ -1.37
SNL1	YIL016W	SYH1	Q02875	849 aa	Known RBP	6.47	□□□□□ -1.37
SNL1	YIL016W	CAB1	Q04430	367 aa		6.47	□□□□□ -1.37
SNL1	YIL016W	PHO4	P07270	312 aa	Known RBP	6.46	□□□□□ -1.38
SNL1	YIL016W	FBP26	P32604	452 aa		6.46	□□□□□ -1.38
SNL1	YIL016W	SUT1	P53032	299 aa	Known RBP	6.46	□□□□□ -1.38
SNL1	YIL016W	SPR28	Q04921	423 aa		6.46	□□□□□ -1.38
SNL1	YIL016W	PEP7	P32609	515 aa		6.45	□□□□□ -1.38
SNL1	YIL016W	DAK2	P43550	591 aa		6.45	□□□□□ -1.38
SNL1	YIL016W	BDP1	P46678	594 aa		6.45	□□□□□ -1.38
SNL1	YIL016W	BDS1	Q08347	646 aa		6.45	□□□□□ -1.38
SNL1	YIL016W	VAC8	P39968	578 aa		6.44	□□□□□ -1.38
SNL1	YIL016W	UTP7	P40055	554 aa	Known RBP	6.44	□□□□□ -1.38
SNL1	YIL016W	FRK1	Q03002	865 aa	Predicted RBP	6.44	□□□□□ -1.38
SNL1	YIL016W	APC11	Q12157	165 aa		6.44	□□□□□ -1.38
SNL1	YIL016W	WTM2	Q12206	467 aa		6.44	□□□□□ -1.38
SNL1	YIL016W	MRF1	P30775	413 aa	Predicted RBP	6.43	□□□□□ -1.38
SNL1	YIL016W	UFD2	P54860	961 aa		6.43	□□□□□ -1.38
SNL1	YIL016W	DFG5	Q05031	458 aa		6.43	□□□□□ -1.38
SNL1	YIL016W	CHL1	P22516	861 aa	Predicted RBP	6.42	□□□□□ -1.38
SNL1	YIL016W	BRN1	P38170	754 aa		6.42	□□□□□ -1.38
SNL1	YIL016W	RPS26A	P39938	119 aa	Known RBP	6.42	□□□□□ -1.38
SNL1	YIL016W	RPS26B	P39939	119 aa	Known RBP	6.42	□□□□□ -1.38
SNL1	YIL016W	CST6	P40535	587 aa		6.42	□□□□□ -1.38
SNL1	YIL016W	MAD1	P40957	749 aa		6.42	□□□□□ -1.38
SNL1	YIL016W	YNL011C	P53980	444 aa		6.42	□□□□□ -1.38
SNL1	YIL016W	BMT6	Q12291	365 aa		6.42	□□□□□ -1.38
SNL1	YIL016W	HXT5	P38695	592 aa		6.41	□□□□□ -1.38
SNL1	YIL016W	ALD3	P54114	506 aa		6.41	□□□□□ -1.38
SNL1	YIL016W	ALD6	P54115	500 aa	Known RBP	6.41	□□□□□ -1.38
SNL1	YIL016W	STE6	P12866	1290 aa		6.4	□□□□□ -1.38
SNL1	YIL016W	MRPL33	P20084	86 aa		6.4	□□□□□ -1.38
SNL1	YIL016W	GCD6	P32501	712 aa	Known RBP	6.39	□□□□□ -1.39
SNL1	YIL016W	KTR2	P33550	425 aa		6.39	□□□□□ -1.39
SNL1	YIL016W	VPS35	P34110	944 aa		6.39	□□□□□ -1.39
SNL1	YIL016W	YJL171C	P46992	396 aa		6.39	□□□□□ -1.39
SNL1	YIL016W	YOL098C	Q12496	1037 aa		6.39	□□□□□ -1.39
SNL1	YIL016W	RPP2B	P02400	110 aa	Known RBP	6.38	□□□□□ -1.39
SNL1	YIL016W	VMA3	P25515	160 aa		6.38	□□□□□ -1.39
SNL1	YIL016W	SAM37	P50110	327 aa		6.38	□□□□□ -1.39
SNL1	YIL016W	SDH2	P21801	266 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	MRT4	P33201	236 aa	Known RBP	6.37	□□□□□ -1.39
SNL1	YIL016W	YBL086C	P38177	466 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	HXT8	P40886	569 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	CDC55	Q00362	526 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	FPR4	Q06205	392 aa	Predicted RBP	6.37	□□□□□ -1.39
SNL1	YIL016W	YPQ2	Q06328	317 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	OXR1	Q08952	273 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	Q0182	Q9ZZW1	134 aa		6.37	□□□□□ -1.39
SNL1	YIL016W	SRP40	P32583	406 aa	Predicted RBP	6.36	□□□□□ -1.39
SNL1	YIL016W	SMC1	P32908	1225 aa		6.36	□□□□□ -1.39
SNL1	YIL016W	DLD3	P39976	496 aa	Known RBP	6.36	□□□□□ -1.39
SNL1	YIL016W	SUM1	P46676	1062 aa		6.36	□□□□□ -1.39
SNL1	YIL016W	VPS16	Q03308	798 aa		6.36	□□□□□ -1.39
SNL1	YIL016W	MCM1	P11746	286 aa		6.35	□□□□□ -1.39
SNL1	YIL016W	SCD5	P34758	872 aa		6.35	□□□□□ -1.39
SNL1	YIL016W	ALA1	P40825	983 aa	Known RBP	6.35	□□□□□ -1.39
SNL1	YIL016W	CWC24	P53769	259 aa		6.35	□□□□□ -1.39
SNL1	YIL016W	TOS4	Q06266	489 aa		6.35	□□□□□ -1.39
SNL1	YIL016W	NOC3	Q07896	663 aa	Predicted RBP	6.35	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms