RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W YNL108CP53929 270 aa6.43□□□□□ -1.38
RPF1YHR088W DIT1P21623 536 aa6.42□□□□□ -1.38
RPF1YHR088W HDA3Q06623 655 aa6.42□□□□□ -1.38
RPF1YHR088W YFL034WP43564 1073 aa6.41□□□□□ -1.38
RPF1YHR088W PUS1Q12211 544 aaKnown RBP6.41□□□□□ -1.38
RPF1YHR088W YDR461C-AQ2V2P7 80 aa6.41□□□□□ -1.38
RPF1YHR088W ALA1P40825 983 aaKnown RBP6.4□□□□□ -1.38
RPF1YHR088W YJL007CP47080 104 aa6.4□□□□□ -1.38
RPF1YHR088W YMR265CQ03508 461 aaKnown RBP6.4□□□□□ -1.38
RPF1YHR088W AI1P03875 834 aa6.38□□□□□ -1.39
RPF1YHR088W UTP7P40055 554 aaKnown RBP6.38□□□□□ -1.39
RPF1YHR088W JJJ2P46997 583 aa6.38□□□□□ -1.39
RPF1YHR088W SYT1Q06836 1226 aa6.38□□□□□ -1.39
RPF1YHR088W TY1A-DR3Q12441 440 aa6.38□□□□□ -1.39
RPF1YHR088W ADE12P80210 433 aaKnown RBP6.37□□□□□ -1.39
RPF1YHR088W IRE1P32361 1115 aa6.36□□□□□ -1.39
RPF1YHR088W LEO1P38439 464 aa6.36□□□□□ -1.39
RPF1YHR088W RPL34BP40525 121 aaKnown RBP6.36□□□□□ -1.39
RPF1YHR088W KRE33P53914 1056 aaKnown RBP6.36□□□□□ -1.39
RPF1YHR088W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
RPF1YHR088W RPP1AP05318 106 aaPredicted RBP6.35□□□□□ -1.39
RPF1YHR088W AIM9P40053 627 aaKnown RBP6.35□□□□□ -1.39
RPF1YHR088W MRX10Q05648 414 aa6.35□□□□□ -1.39
RPF1YHR088W MCM1P11746 286 aa6.34□□□□□ -1.39
RPF1YHR088W RDS2P19541 446 aaKnown RBP6.34□□□□□ -1.39
RPF1YHR088W BIM1P40013 344 aa6.34□□□□□ -1.39
RPF1YHR088W YPQ2Q06328 317 aa6.34□□□□□ -1.39
RPF1YHR088W SWI5P08153 709 aa6.33□□□□□ -1.4
RPF1YHR088W NSG2P53898 299 aa6.33□□□□□ -1.4
RPF1YHR088W TIF1P10081 395 aaKnown RBP6.32□□□□□ -1.4
RPF1YHR088W SIS2P36024 562 aa6.32□□□□□ -1.4
RPF1YHR088W RPS6AP0CX37 236 aaKnown RBP6.31□□□□□ -1.4
RPF1YHR088W RPS6BP0CX38 236 aaPredicted RBP6.31□□□□□ -1.4
RPF1YHR088W RTG2P32608 588 aaKnown RBP6.31□□□□□ -1.4
RPF1YHR088W TSC13Q99190 310 aa6.31□□□□□ -1.4
RPF1YHR088W ENO1P00924 437 aaKnown RBP6.3□□□□□ -1.4
RPF1YHR088W FPS1P23900 669 aa6.3□□□□□ -1.4
RPF1YHR088W PDC6P26263 563 aaKnown RBP6.3□□□□□ -1.4
RPF1YHR088W ATG32P40458 529 aa6.3□□□□□ -1.4
RPF1YHR088W THI72Q08579 599 aa6.3□□□□□ -1.4
RPF1YHR088W SHM1P37292 490 aaPredicted RBP6.29□□□□□ -1.4
RPF1YHR088W YFL066CP43538 392 aa6.29□□□□□ -1.4
RPF1YHR088W PEP12P32854 288 aa6.28□□□□□ -1.4
RPF1YHR088W NTH2P35172 780 aa6.28□□□□□ -1.4
RPF1YHR088W MDJ1P35191 511 aa6.28□□□□□ -1.4
RPF1YHR088W YTA6P40328 754 aa6.28□□□□□ -1.4
RPF1YHR088W PSH1Q12161 406 aa6.28□□□□□ -1.4
RPF1YHR088W LEU1P07264 779 aaKnown RBP6.27□□□□□ -1.41
RPF1YHR088W MRPL16P38064 232 aa6.27□□□□□ -1.41
RPF1YHR088W LSB3P43603 459 aaKnown RBP6.27□□□□□ -1.41
RPF1YHR088W RPS31P05759 152 aaKnown RBP6.26□□□□□ -1.41
RPF1YHR088W GPM1P00950 247 aaKnown RBP6.25□□□□□ -1.41
RPF1YHR088W YPR053CQ6Q5F3 151 aa6.25□□□□□ -1.41
RPF1YHR088W HAP4P14064 554 aa6.24□□□□□ -1.41
RPF1YHR088W PDI1P17967 522 aaKnown RBP6.24□□□□□ -1.41
RPF1YHR088W PHO87P25360 923 aa6.24□□□□□ -1.41
RPF1YHR088W MET1P36150 593 aa6.24□□□□□ -1.41
RPF1YHR088W SPR3P41901 512 aa6.24□□□□□ -1.41
RPF1YHR088W STB3Q12427 513 aa6.24□□□□□ -1.41
RPF1YHR088W CYT1P07143 309 aa6.23□□□□□ -1.41
RPF1YHR088W UBP1P25037 809 aa6.23□□□□□ -1.41
RPF1YHR088W KNS1P32350 737 aaPredicted RBP6.23□□□□□ -1.41
RPF1YHR088W UTP4Q06679 776 aaKnown RBP6.23□□□□□ -1.41
RPF1YHR088W GAS4Q08271 471 aa6.23□□□□□ -1.41
RPF1YHR088W RGP1P16664 663 aa6.21□□□□□ -1.42
RPF1YHR088W MCX1P38323 520 aaPredicted RBP6.21□□□□□ -1.42
RPF1YHR088W SKN7P38889 622 aa6.2□□□□□ -1.42
RPF1YHR088W CCT8P47079 568 aaKnown RBP6.2□□□□□ -1.42
RPF1YHR088W YNR014WP53719 212 aa6.2□□□□□ -1.42
RPF1YHR088W YMR187CQ03236 431 aa6.2□□□□□ -1.42
RPF1YHR088W HEH2Q03281 663 aa6.2□□□□□ -1.42
RPF1YHR088W PDC5P16467 563 aaKnown RBP6.19□□□□□ -1.42
RPF1YHR088W SCD5P34758 872 aa6.19□□□□□ -1.42
RPF1YHR088W ALD2P47771 506 aa6.19□□□□□ -1.42
RPF1YHR088W ACS2P52910 683 aaKnown RBP6.19□□□□□ -1.42
RPF1YHR088W TDA6Q06466 467 aa6.19□□□□□ -1.42
RPF1YHR088W MLF3P32047 452 aa6.18□□□□□ -1.42
RPF1YHR088W YNL165WP53891 406 aa6.18□□□□□ -1.42
RPF1YHR088W TY1A-DR2Q03964 440 aaKnown RBP6.18□□□□□ -1.42
RPF1YHR088W Q0182Q9ZZW1 134 aa6.18□□□□□ -1.42
RPF1YHR088W BOI2P39969 1040 aa6.17□□□□□ -1.42
RPF1YHR088W SBE2P42223 864 aaKnown RBP6.17□□□□□ -1.42
RPF1YHR088W GAL2P13181 574 aa6.16□□□□□ -1.42
RPF1YHR088W NGR1P32831 672 aaKnown RBP6.16□□□□□ -1.42
RPF1YHR088W SKP1P52286 194 aa6.15□□□□□ -1.42
RPF1YHR088W MSC7P38694 644 aa6.14□□□□□ -1.43
RPF1YHR088W VAN1P23642 535 aa6.13□□□□□ -1.43
RPF1YHR088W NCL1P38205 684 aaKnown RBP6.13□□□□□ -1.43
RPF1YHR088W KTR7P40504 517 aa6.13□□□□□ -1.43
RPF1YHR088W CWH41P53008 833 aa6.13□□□□□ -1.43
RPF1YHR088W KAP122P32767 1081 aa6.12□□□□□ -1.43
RPF1YHR088W HXT5P38695 592 aa6.12□□□□□ -1.43
RPF1YHR088W MTO1P53070 669 aa6.12□□□□□ -1.43
RPF1YHR088W TRS33Q99394 268 aa6.12□□□□□ -1.43
RPF1YHR088W ROM1P53046 1155 aa6.11□□□□□ -1.43
RPF1YHR088W TGL4P36165 910 aa6.1□□□□□ -1.43
RPF1YHR088W TTI1P36097 1038 aa6.09□□□□□ -1.43
RPF1YHR088W APM2P38700 605 aa6.09□□□□□ -1.43
RPF1YHR088W YDR215CQ12240 137 aa6.09□□□□□ -1.43
RPF1YHR088W SBP1P10080 294 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms