RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W YNL108CP53929 270 aa5.58□□□□□ -1.52
LIF1YGL090W SLA1P32790 1244 aa5.57□□□□□ -1.52
LIF1YGL090W HAL5P38970 855 aaKnown RBP5.57□□□□□ -1.52
LIF1YGL090W YNR014WP53719 212 aa5.57□□□□□ -1.52
LIF1YGL090W SSN3P39073 555 aa5.56□□□□□ -1.52
LIF1YGL090W WTM2Q12206 467 aa5.56□□□□□ -1.52
LIF1YGL090W DAT1P13483 248 aaKnown RBP5.55□□□□□ -1.52
LIF1YGL090W AHP1P38013 176 aaKnown RBP5.55□□□□□ -1.52
LIF1YGL090W APL6P46682 809 aa5.55□□□□□ -1.52
LIF1YGL090W SPT5P27692 1063 aaKnown RBP5.54□□□□□ -1.52
LIF1YGL090W MCX1P38323 520 aaPredicted RBP5.54□□□□□ -1.52
LIF1YGL090W UTP7P40055 554 aaKnown RBP5.54□□□□□ -1.52
LIF1YGL090W ENO2P00925 437 aaKnown RBP5.53□□□□□ -1.52
LIF1YGL090W UTR2P32623 467 aa5.53□□□□□ -1.52
LIF1YGL090W SOH1P38633 127 aa5.53□□□□□ -1.52
LIF1YGL090W YJL007CP47080 104 aa5.53□□□□□ -1.52
LIF1YGL090W TY1A-DR3Q12441 440 aa5.53□□□□□ -1.52
LIF1YGL090W SUP45P12385 437 aaKnown RBP5.51□□□□□ -1.53
LIF1YGL090W GPM1P00950 247 aaKnown RBP5.5□□□□□ -1.53
LIF1YGL090W SPT2P06843 333 aaPredicted RBP5.5□□□□□ -1.53
LIF1YGL090W FPS1P23900 669 aa5.5□□□□□ -1.53
LIF1YGL090W TBS1P38114 1094 aa5.5□□□□□ -1.53
LIF1YGL090W BOI2P39969 1040 aa5.5□□□□□ -1.53
LIF1YGL090W MRX12P47084 519 aa5.5□□□□□ -1.53
LIF1YGL090W YCK2P23292 546 aaKnown RBP5.49□□□□□ -1.53
LIF1YGL090W ALA1P40825 983 aaKnown RBP5.49□□□□□ -1.53
LIF1YGL090W HDA3Q06623 655 aa5.49□□□□□ -1.53
LIF1YGL090W MET1P36150 593 aa5.47□□□□□ -1.53
LIF1YGL090W YDR215CQ12240 137 aa5.47□□□□□ -1.53
LIF1YGL090W RDS2P19541 446 aaKnown RBP5.46□□□□□ -1.54
LIF1YGL090W SLX8P40072 274 aa5.46□□□□□ -1.54
LIF1YGL090W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
LIF1YGL090W IRE1P32361 1115 aa5.45□□□□□ -1.54
LIF1YGL090W AMN1P38285 549 aaPredicted RBP5.45□□□□□ -1.54
LIF1YGL090W BIM1P40013 344 aa5.45□□□□□ -1.54
LIF1YGL090W ATG32P40458 529 aa5.45□□□□□ -1.54
LIF1YGL090W SUM1P46676 1062 aa5.45□□□□□ -1.54
LIF1YGL090W YPP1P46951 817 aa5.45□□□□□ -1.54
LIF1YGL090W RIM21P48565 533 aa5.45□□□□□ -1.54
LIF1YGL090W SLN1P39928 1220 aaPredicted RBP5.44□□□□□ -1.54
LIF1YGL090W LSB6P42951 607 aa5.44□□□□□ -1.54
LIF1YGL090W JJJ2P46997 583 aa5.44□□□□□ -1.54
LIF1YGL090W SHM1P37292 490 aaPredicted RBP5.43□□□□□ -1.54
LIF1YGL090W MRPL16P38064 232 aa5.43□□□□□ -1.54
LIF1YGL090W TAT1P38085 619 aa5.43□□□□□ -1.54
LIF1YGL090W ENO1P00924 437 aaKnown RBP5.42□□□□□ -1.54
LIF1YGL090W KNS1P32350 737 aaPredicted RBP5.42□□□□□ -1.54
LIF1YGL090W ATG3P40344 310 aa5.42□□□□□ -1.54
LIF1YGL090W UTP13Q05946 817 aaKnown RBP5.42□□□□□ -1.54
LIF1YGL090W MCA1Q08601 432 aa5.42□□□□□ -1.54
LIF1YGL090W TIF1P10081 395 aaKnown RBP5.41□□□□□ -1.54
LIF1YGL090W SWI5P08153 709 aa5.4□□□□□ -1.54
LIF1YGL090W PDC5P16467 563 aaKnown RBP5.4□□□□□ -1.54
LIF1YGL090W RTG2P32608 588 aaKnown RBP5.4□□□□□ -1.54
LIF1YGL090W MAC1P35192 417 aa5.4□□□□□ -1.54
LIF1YGL090W AIM9P40053 627 aaKnown RBP5.39□□□□□ -1.55
LIF1YGL090W MRX10Q05648 414 aa5.39□□□□□ -1.55
LIF1YGL090W STB3Q12427 513 aa5.39□□□□□ -1.55
LIF1YGL090W PDC6P26263 563 aaKnown RBP5.38□□□□□ -1.55
LIF1YGL090W PSH1Q12161 406 aa5.38□□□□□ -1.55
LIF1YGL090W PDI1P17967 522 aaKnown RBP5.37□□□□□ -1.55
LIF1YGL090W KTR7P40504 517 aa5.37□□□□□ -1.55
LIF1YGL090W RPL34BP40525 121 aaKnown RBP5.36□□□□□ -1.55
LIF1YGL090W SPR3P41901 512 aa5.36□□□□□ -1.55
LIF1YGL090W TY1A-DR2Q03964 440 aaKnown RBP5.36□□□□□ -1.55
LIF1YGL090W YPQ2Q06328 317 aa5.36□□□□□ -1.55
LIF1YGL090W RPS31P05759 152 aaKnown RBP5.35□□□□□ -1.55
LIF1YGL090W RPS6AP0CX37 236 aaKnown RBP5.35□□□□□ -1.55
LIF1YGL090W RPS6BP0CX38 236 aaPredicted RBP5.35□□□□□ -1.55
LIF1YGL090W NTH2P35172 780 aa5.35□□□□□ -1.55
LIF1YGL090W PRY1P47032 299 aa5.35□□□□□ -1.55
LIF1YGL090W YNL165WP53891 406 aa5.35□□□□□ -1.55
LIF1YGL090W YPL034WQ03083 165 aa5.34□□□□□ -1.55
LIF1YGL090W RPP1AP05318 106 aaPredicted RBP5.33□□□□□ -1.56
LIF1YGL090W PEP12P32854 288 aa5.31□□□□□ -1.56
LIF1YGL090W LEO1P38439 464 aa5.31□□□□□ -1.56
LIF1YGL090W ALO1P54783 526 aaKnown RBP5.31□□□□□ -1.56
LIF1YGL090W LEU1P07264 779 aaKnown RBP5.3□□□□□ -1.56
LIF1YGL090W TSC13Q99190 310 aa5.3□□□□□ -1.56
LIF1YGL090W MLF3P32047 452 aa5.29□□□□□ -1.56
LIF1YGL090W OMA1P36163 345 aa5.29□□□□□ -1.56
LIF1YGL090W TPS3P38426 1054 aaKnown RBP5.29□□□□□ -1.56
LIF1YGL090W IRC24P40580 263 aa5.29□□□□□ -1.56
LIF1YGL090W YFL034WP43564 1073 aa5.29□□□□□ -1.56
LIF1YGL090W ALD2P47771 506 aa5.29□□□□□ -1.56
LIF1YGL090W HGH1P48362 394 aaKnown RBP5.29□□□□□ -1.56
LIF1YGL090W ACS2P52910 683 aaKnown RBP5.29□□□□□ -1.56
LIF1YGL090W MSC7P38694 644 aa5.28□□□□□ -1.56
LIF1YGL090W Q0182Q9ZZW1 134 aa5.28□□□□□ -1.56
LIF1YGL090W CYT1P07143 309 aa5.27□□□□□ -1.57
LIF1YGL090W YTA6P40328 754 aa5.27□□□□□ -1.57
LIF1YGL090W NHA1Q99271 985 aa5.27□□□□□ -1.57
LIF1YGL090W GLT1Q12680 2145 aaKnown RBP5.27□□□□□ -1.57
LIF1YGL090W RGP1P16664 663 aa5.26□□□□□ -1.57
LIF1YGL090W ALG14P38242 237 aa5.25□□□□□ -1.57
LIF1YGL090W INP52P50942 1183 aa5.25□□□□□ -1.57
LIF1YGL090W BUD9P53226 547 aa5.25□□□□□ -1.57
LIF1YGL090W DMA2P53924 522 aa5.25□□□□□ -1.57
LIF1YGL090W MCM1P11746 286 aa5.24□□□□□ -1.57
LIF1YGL090W PGM2P37012 569 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms