RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C ADE12P80210 433 aaKnown RBP2.21□□□□□ -2.06
UBP3YER151C MYO4P32492 1471 aa2.21□□□□□ -2.06
UBP3YER151C TY3B-GQ99315 1547 aa2.21□□□□□ -2.06
UBP3YER151C PAN1P32521 1480 aa2.2□□□□□ -2.06
UBP3YER151C CHD1P32657 1468 aa2.2□□□□□ -2.06
UBP3YER151C CKB1P43639 278 aa2.2□□□□□ -2.06
UBP3YER151C VMR1P38735 1592 aa2.2□□□□□ -2.06
UBP3YER151C PBS2P08018 668 aa2.19□□□□□ -2.06
UBP3YER151C YMR265CQ03508 461 aaKnown RBP2.19□□□□□ -2.06
UBP3YER151C TY2B-LR1P0C2J3 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-FP0CX63 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-GR2P0CX64 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-CP25384 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-DR2Q03494 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY1B-DR1Q03855 1755 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-DR3Q07791 1770 aaKnown RBP2.19□□□□□ -2.06
UBP3YER151C TY2B-OR1Q12113 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-DR1Q12472 1770 aa2.19□□□□□ -2.06
UBP3YER151C TY2B-OR2Q12501 1770 aa2.19□□□□□ -2.06
UBP3YER151C APP1P53933 587 aa2.19□□□□□ -2.06
UBP3YER151C MKS1P34072 584 aa2.19□□□□□ -2.06
UBP3YER151C DSF2P38213 736 aa2.19□□□□□ -2.06
UBP3YER151C IRC24P40580 263 aa2.19□□□□□ -2.06
UBP3YER151C NUP42P49686 430 aaKnown RBP2.19□□□□□ -2.06
UBP3YER151C CFT1Q06632 1357 aaKnown RBP2.18□□□□□ -2.06
UBP3YER151C NIS1P53939 407 aa2.18□□□□□ -2.06
UBP3YER151C YPR097WQ06839 1073 aa2.18□□□□□ -2.06
UBP3YER151C BDS1Q08347 646 aa2.18□□□□□ -2.06
UBP3YER151C STU1P38198 1513 aa2.18□□□□□ -2.06
UBP3YER151C YRF1-2P40105 1681 aa2.18□□□□□ -2.06
UBP3YER151C DMA1P38823 416 aa2.18□□□□□ -2.06
UBP3YER151C TY2B-BQ12491 1770 aa2.17□□□□□ -2.06
UBP3YER151C DFG5Q05031 458 aa2.17□□□□□ -2.06
UBP3YER151C TDA6Q06466 467 aa2.17□□□□□ -2.06
UBP3YER151C TAT1P38085 619 aa2.16□□□□□ -2.06
UBP3YER151C RPP2BP02400 110 aaKnown RBP2.16□□□□□ -2.06
UBP3YER151C YBL086CP38177 466 aa2.16□□□□□ -2.06
UBP3YER151C SAS10Q12136 610 aaPredicted RBP2.16□□□□□ -2.06
UBP3YER151C DLD3P39976 496 aaKnown RBP2.15□□□□□ -2.06
UBP3YER151C MAM3Q12296 706 aa2.15□□□□□ -2.06
UBP3YER151C TY1B-DR3Q99231 1755 aa2.15□□□□□ -2.07
UBP3YER151C POL1P13382 1468 aa2.15□□□□□ -2.07
UBP3YER151C BOI2P39969 1040 aa2.15□□□□□ -2.07
UBP3YER151C SBE2P42223 864 aaKnown RBP2.15□□□□□ -2.07
UBP3YER151C TY1B-JR2P47100 1755 aaKnown RBP2.15□□□□□ -2.07
UBP3YER151C FPK1P53739 893 aa2.15□□□□□ -2.07
UBP3YER151C CUZ1P53899 274 aa2.15□□□□□ -2.07
UBP3YER151C TY1B-ER2Q03619 1755 aa2.15□□□□□ -2.07
UBP3YER151C TY1B-MR1Q04214 1755 aa2.15□□□□□ -2.07
UBP3YER151C TY1B-MR2Q04670 1755 aaKnown RBP2.15□□□□□ -2.07
UBP3YER151C TY1B-LR1Q12088 1755 aaKnown RBP2.15□□□□□ -2.07
UBP3YER151C TY1B-NL1Q12112 1755 aa2.15□□□□□ -2.07
UBP3YER151C TY1B-GR1Q12141 1755 aa2.15□□□□□ -2.07
UBP3YER151C TY1B-BLQ12490 1755 aa2.15□□□□□ -2.07
UBP3YER151C CCP1P00431 361 aa2.14□□□□□ -2.07
UBP3YER151C MET1P36150 593 aa2.14□□□□□ -2.07
UBP3YER151C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UBP3YER151C YLL066CQ99208 1374 aa2.14□□□□□ -2.07
UBP3YER151C TRM1P15565 570 aaKnown RBP2.14□□□□□ -2.07
UBP3YER151C KRE33P53914 1056 aaKnown RBP2.14□□□□□ -2.07
UBP3YER151C DIT2P21595 489 aa2.13□□□□□ -2.07
UBP3YER151C IES2P40154 320 aa2.13□□□□□ -2.07
UBP3YER151C YFL066CP43538 392 aa2.13□□□□□ -2.07
UBP3YER151C OMA1P36163 345 aa2.13□□□□□ -2.07
UBP3YER151C LSB6P42951 607 aa2.13□□□□□ -2.07
UBP3YER151C HST2P53686 357 aa2.13□□□□□ -2.07
UBP3YER151C NUP159P40477 1460 aa2.13□□□□□ -2.07
UBP3YER151C YOR1P53049 1477 aa2.13□□□□□ -2.07
UBP3YER151C CDC19P00549 500 aaKnown RBP2.12□□□□□ -2.07
UBP3YER151C ARO1P08566 1588 aaKnown RBP2.12□□□□□ -2.07
UBP3YER151C YRF1-1P0CX20 1796 aa2.12□□□□□ -2.07
UBP3YER151C YRF1-5P0CX21 1796 aa2.12□□□□□ -2.07
UBP3YER151C YRF1-8P0CX22 1796 aa2.12□□□□□ -2.07
UBP3YER151C VAC17P25591 423 aa2.12□□□□□ -2.07
UBP3YER151C RSC30P38781 883 aa2.12□□□□□ -2.07
UBP3YER151C SKN7P38889 622 aa2.12□□□□□ -2.07
UBP3YER151C MMP1Q12372 583 aa2.12□□□□□ -2.07
UBP3YER151C ALO1P54783 526 aaKnown RBP2.11□□□□□ -2.07
UBP3YER151C NAM8Q00539 523 aaKnown RBP2.11□□□□□ -2.07
UBP3YER151C DRS2P39524 1355 aa2.11□□□□□ -2.07
UBP3YER151C NAB2P32505 525 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
UBP3YER151C ITT1Q04638 464 aa2.11□□□□□ -2.07
UBP3YER151C SCJ1P25303 377 aa2.1□□□□□ -2.07
UBP3YER151C MCX1P38323 520 aaPredicted RBP2.1□□□□□ -2.07
UBP3YER151C EMW1P42842 904 aaKnown RBP2.1□□□□□ -2.07
UBP3YER151C YPL034WQ03083 165 aa2.1□□□□□ -2.07
UBP3YER151C CAT8P39113 1433 aa2.1□□□□□ -2.07
UBP3YER151C NUP188P52593 1655 aaKnown RBP2.09□□□□□ -2.07
UBP3YER151C SNQ2P32568 1501 aaKnown RBP2.09□□□□□ -2.07
UBP3YER151C DIT1P21623 536 aa2.09□□□□□ -2.07
UBP3YER151C PDR5P33302 1511 aaKnown RBP2.09□□□□□ -2.08
UBP3YER151C AMN1P38285 549 aaPredicted RBP2.09□□□□□ -2.08
UBP3YER151C GLN1P32288 370 aaKnown RBP2.08□□□□□ -2.08
UBP3YER151C AHP1P38013 176 aaKnown RBP2.08□□□□□ -2.08
UBP3YER151C SPP41P38904 1435 aa2.08□□□□□ -2.08
UBP3YER151C FPS1P23900 669 aa2.08□□□□□ -2.08
UBP3YER151C ALA1P40825 983 aaKnown RBP2.08□□□□□ -2.08
UBP3YER151C UBP15P50101 1230 aa2.08□□□□□ -2.08
UBP3YER151C SYT1Q06836 1226 aa2.07□□□□□ -2.08
UBP3YER151C BCK1Q01389 1478 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms