RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W ERT1P38140 529 aa2.27□□□□□ -2.05
SXM1YDR395W IPL1P38991 367 aa2.27□□□□□ -2.05
SXM1YDR395W LYS4P49367 693 aaPredicted RBP2.27□□□□□ -2.05
SXM1YDR395W DPL1Q05567 589 aa2.27□□□□□ -2.05
SXM1YDR395W STB3Q12427 513 aa2.27□□□□□ -2.05
SXM1YDR395W KEX1P09620 729 aa2.27□□□□□ -2.05
SXM1YDR395W PDR1P12383 1068 aa2.27□□□□□ -2.05
SXM1YDR395W UTP22P53254 1237 aaPredicted RBP2.27□□□□□ -2.05
SXM1YDR395W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SXM1YDR395W ECM30Q06673 1274 aa2.27□□□□□ -2.05
SXM1YDR395W SIR4P11978 1358 aa2.27□□□□□ -2.05
SXM1YDR395W MOT2P34909 587 aaKnown RBP2.27□□□□□ -2.05
SXM1YDR395W PTC2P39966 464 aaKnown RBP2.27□□□□□ -2.05
SXM1YDR395W ZDS1P50111 915 aaKnown RBP2.27□□□□□ -2.05
SXM1YDR395W SQS1P53866 767 aaKnown RBP2.27□□□□□ -2.05
SXM1YDR395W YLR326WQ06170 240 aaKnown RBP2.27□□□□□ -2.05
SXM1YDR395W CDC73Q06697 393 aa2.27□□□□□ -2.05
SXM1YDR395W DRE2P36152 348 aa2.26□□□□□ -2.05
SXM1YDR395W PCS60P38137 543 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SXM1YDR395W RRT14P40470 206 aa2.26□□□□□ -2.05
SXM1YDR395W FAS2P19097 1887 aaKnown RBP2.26□□□□□ -2.05
SXM1YDR395W GAP1P19145 602 aaPredicted RBP2.25□□□□□ -2.05
SXM1YDR395W RET1P22276 1149 aaKnown RBP2.25□□□□□ -2.05
SXM1YDR395W FIR1P40020 876 aa2.25□□□□□ -2.05
SXM1YDR395W IES2P40154 320 aa2.25□□□□□ -2.05
SXM1YDR395W DAP1Q12091 152 aa2.25□□□□□ -2.05
SXM1YDR395W TY3B-IQ7LHG5 1498 aaKnown RBP2.24□□□□□ -2.05
SXM1YDR395W YDR090CQ03193 310 aa2.24□□□□□ -2.05
SXM1YDR395W RIM15P43565 1770 aa2.24□□□□□ -2.05
SXM1YDR395W AMS1P22855 1083 aa2.23□□□□□ -2.05
SXM1YDR395W IFH1P39520 1085 aa2.23□□□□□ -2.05
SXM1YDR395W YMR206WQ03695 313 aa2.23□□□□□ -2.05
SXM1YDR395W NAP1P25293 417 aaKnown RBP2.23□□□□□ -2.05
SXM1YDR395W VHR2P40041 505 aa2.23□□□□□ -2.05
SXM1YDR395W DOT5P40553 215 aa2.23□□□□□ -2.05
SXM1YDR395W MSN5P52918 1224 aa2.23□□□□□ -2.05
SXM1YDR395W BUD20Q08004 166 aaPredicted RBP2.23□□□□□ -2.05
SXM1YDR395W ISU2Q12056 156 aa2.23□□□□□ -2.05
SXM1YDR395W YRF1-4O13559 1382 aa2.22□□□□□ -2.05
SXM1YDR395W SEC2P17065 759 aa2.22□□□□□ -2.05
SXM1YDR395W EAF6P47128 113 aa2.22□□□□□ -2.05
SXM1YDR395W STR2P47164 639 aa2.22□□□□□ -2.05
SXM1YDR395W RRT6P53117 311 aaPredicted RBP2.22□□□□□ -2.05
SXM1YDR395W TY1A-DR4O74302 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-HP0C2I4 478 aaKnown RBP2.21□□□□□ -2.06
SXM1YDR395W TY1A-AP0CX57 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-PR1P0CX58 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-ORP0CX59 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-PR2P0CX60 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-DR5P0CX65 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-ER2P0CX66 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-GR3P0CX67 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-LR1P0CX68 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-MR2P0CX69 440 aa2.21□□□□□ -2.06
SXM1YDR395W PAM1P37304 830 aaKnown RBP2.21□□□□□ -2.06
SXM1YDR395W TOS1P38288 455 aa2.21□□□□□ -2.06
SXM1YDR395W AIR1P40507 360 aaKnown RBP2.21□□□□□ -2.06
SXM1YDR395W TY1A-JR2P47099 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-DR1Q03856 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-ML1Q04706 440 aaKnown RBP2.21□□□□□ -2.06
SXM1YDR395W TY1A-BRQ12217 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-NL2Q12470 440 aa2.21□□□□□ -2.06
SXM1YDR395W TY1A-GR2Q12485 440 aa2.21□□□□□ -2.06
SXM1YDR395W SHC1P39000 512 aa2.21□□□□□ -2.06
SXM1YDR395W ORC1P54784 914 aaPredicted RBP2.21□□□□□ -2.06
SXM1YDR395W SAS10Q12136 610 aaPredicted RBP2.21□□□□□ -2.06
SXM1YDR395W TRK1P12685 1235 aa2.2□□□□□ -2.06
SXM1YDR395W CST6P40535 587 aa2.2□□□□□ -2.06
SXM1YDR395W YNR029CP53729 429 aaKnown RBP2.2□□□□□ -2.06
SXM1YDR395W FOX2Q02207 900 aaKnown RBP2.2□□□□□ -2.06
SXM1YDR395W YPL062WQ02781 134 aa2.2□□□□□ -2.06
SXM1YDR395W ATG20Q07528 640 aa2.2□□□□□ -2.06
SXM1YDR395W APE3P37302 537 aaKnown RBP2.19□□□□□ -2.06
SXM1YDR395W PAH1P32567 862 aa2.19□□□□□ -2.06
SXM1YDR395W PEX2P32800 271 aa2.19□□□□□ -2.06
SXM1YDR395W AIM21P40563 679 aa2.19□□□□□ -2.06
SXM1YDR395W IOC4Q04213 475 aa2.19□□□□□ -2.06
SXM1YDR395W KTR4P38131 464 aa2.18□□□□□ -2.06
SXM1YDR395W PEA2P40091 420 aa2.18□□□□□ -2.06
SXM1YDR395W ISM1P48526 1002 aa2.18□□□□□ -2.06
SXM1YDR395W BUG1Q12191 341 aa2.18□□□□□ -2.06
SXM1YDR395W RAD59Q12223 238 aa2.18□□□□□ -2.06
SXM1YDR395W SET1P38827 1080 aaKnown RBP2.18□□□□□ -2.06
SXM1YDR395W AUS1Q08409 1394 aa2.18□□□□□ -2.06
SXM1YDR395W TUS1Q06412 1307 aa2.18□□□□□ -2.06
SXM1YDR395W FAA3P39002 694 aa2.18□□□□□ -2.06
SXM1YDR395W SAS4Q04003 481 aa2.18□□□□□ -2.06
SXM1YDR395W RPS9AO13516 197 aaKnown RBP2.17□□□□□ -2.06
SXM1YDR395W KIN4Q01919 800 aa2.17□□□□□ -2.06
SXM1YDR395W CWC15Q03772 175 aaKnown RBP2.17□□□□□ -2.06
SXM1YDR395W EAF1Q06337 982 aa2.17□□□□□ -2.06
SXM1YDR395W YGR130CP53278 816 aa2.17□□□□□ -2.06
SXM1YDR395W ORC6P38826 435 aa2.16□□□□□ -2.06
SXM1YDR395W GYP1Q08484 637 aa2.16□□□□□ -2.06
SXM1YDR395W AHC1Q12433 566 aa2.16□□□□□ -2.06
SXM1YDR395W TY4B-JP47024 1803 aa2.16□□□□□ -2.06
SXM1YDR395W PRP5P21372 849 aaPredicted RBP2.15□□□□□ -2.06
SXM1YDR395W LDH1P38139 375 aa2.15□□□□□ -2.06
SXM1YDR395W YDL176WQ12027 708 aa2.15□□□□□ -2.06
SXM1YDR395W YDR034W-BQ6Q5X2 51 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms