RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SUM1P46676 1062 aa6.03□□□□□ -1.44
ASM4YDL088C YPR204WQ08995 1032 aa6.03□□□□□ -1.44
ASM4YDL088C CCP1P00431 361 aa6.02□□□□□ -1.45
ASM4YDL088C RDS2P19541 446 aaKnown RBP6.02□□□□□ -1.45
ASM4YDL088C AIM9P40053 627 aaKnown RBP6.01□□□□□ -1.45
ASM4YDL088C YFL034WP43564 1073 aa6.01□□□□□ -1.45
ASM4YDL088C UBP15P50101 1230 aa6.01□□□□□ -1.45
ASM4YDL088C LYS5P50113 272 aa6.01□□□□□ -1.45
ASM4YDL088C MRX10Q05648 414 aa6.01□□□□□ -1.45
ASM4YDL088C DPH6Q12429 685 aa6.01□□□□□ -1.45
ASM4YDL088C CUZ1P53899 274 aa6□□□□□ -1.45
ASM4YDL088C DMA2P53924 522 aa6□□□□□ -1.45
ASM4YDL088C CEM1P39525 442 aa5.99□□□□□ -1.45
ASM4YDL088C SWI5P08153 709 aa5.98□□□□□ -1.45
ASM4YDL088C SLA1P32790 1244 aa5.98□□□□□ -1.45
ASM4YDL088C KTR7P40504 517 aa5.98□□□□□ -1.45
ASM4YDL088C YMR265CQ03508 461 aaKnown RBP5.98□□□□□ -1.45
ASM4YDL088C PDI1P17967 522 aaKnown RBP5.97□□□□□ -1.45
ASM4YDL088C JJJ2P46997 583 aa5.97□□□□□ -1.45
ASM4YDL088C TY1A-DR3Q12441 440 aa5.97□□□□□ -1.45
ASM4YDL088C RPS6AP0CX37 236 aaKnown RBP5.97□□□□□ -1.45
ASM4YDL088C RPS6BP0CX38 236 aaPredicted RBP5.97□□□□□ -1.45
ASM4YDL088C NTH2P35172 780 aa5.97□□□□□ -1.45
ASM4YDL088C IRE1P32361 1115 aa5.96□□□□□ -1.46
ASM4YDL088C DIT1P21623 536 aa5.95□□□□□ -1.46
ASM4YDL088C TSC13Q99190 310 aa5.95□□□□□ -1.46
ASM4YDL088C JJJ3P47138 172 aa5.94□□□□□ -1.46
ASM4YDL088C KRE33P53914 1056 aaKnown RBP5.94□□□□□ -1.46
ASM4YDL088C ADE12P80210 433 aaKnown RBP5.93□□□□□ -1.46
ASM4YDL088C PEP12P32854 288 aa5.93□□□□□ -1.46
ASM4YDL088C SIS2P36024 562 aa5.92□□□□□ -1.46
ASM4YDL088C SHM1P37292 490 aaPredicted RBP5.92□□□□□ -1.46
ASM4YDL088C YPQ2Q06328 317 aa5.91□□□□□ -1.46
ASM4YDL088C CYT1P07143 309 aa5.9□□□□□ -1.46
ASM4YDL088C PHO87P25360 923 aa5.9□□□□□ -1.46
ASM4YDL088C YTA6P40328 754 aa5.9□□□□□ -1.46
ASM4YDL088C SYT1Q06836 1226 aa5.9□□□□□ -1.46
ASM4YDL088C HAP4P14064 554 aa5.89□□□□□ -1.47
ASM4YDL088C PDC6P26263 563 aaKnown RBP5.89□□□□□ -1.47
ASM4YDL088C ACS2P52910 683 aaKnown RBP5.89□□□□□ -1.47
ASM4YDL088C PSH1Q12161 406 aa5.89□□□□□ -1.47
ASM4YDL088C MRPL16P38064 232 aa5.89□□□□□ -1.47
ASM4YDL088C MTC5Q03897 1148 aa5.89□□□□□ -1.47
ASM4YDL088C STB3Q12427 513 aa5.89□□□□□ -1.47
ASM4YDL088C YDR461C-AQ2V2P7 80 aa5.89□□□□□ -1.47
ASM4YDL088C MCM1P11746 286 aa5.88□□□□□ -1.47
ASM4YDL088C FPS1P23900 669 aa5.88□□□□□ -1.47
ASM4YDL088C ICP55P40051 511 aa5.88□□□□□ -1.47
ASM4YDL088C THI72Q08579 599 aa5.88□□□□□ -1.47
ASM4YDL088C AI1P03875 834 aa5.87□□□□□ -1.47
ASM4YDL088C NSG2P53898 299 aa5.87□□□□□ -1.47
ASM4YDL088C PUS1Q12211 544 aaKnown RBP5.87□□□□□ -1.47
ASM4YDL088C RPS31P05759 152 aaKnown RBP5.86□□□□□ -1.47
ASM4YDL088C MDJ1P35191 511 aa5.86□□□□□ -1.47
ASM4YDL088C GAS4Q08271 471 aa5.86□□□□□ -1.47
ASM4YDL088C GAL2P13181 574 aa5.85□□□□□ -1.47
ASM4YDL088C PHM7Q12252 991 aa5.85□□□□□ -1.47
ASM4YDL088C Q0182Q9ZZW1 134 aa5.85□□□□□ -1.47
ASM4YDL088C MLF3P32047 452 aa5.84□□□□□ -1.47
ASM4YDL088C YNL165WP53891 406 aa5.84□□□□□ -1.47
ASM4YDL088C TTI1P36097 1038 aa5.84□□□□□ -1.48
ASM4YDL088C TGL4P36165 910 aa5.84□□□□□ -1.48
ASM4YDL088C ECM23Q02710 187 aa5.84□□□□□ -1.48
ASM4YDL088C RPP1AP05318 106 aaPredicted RBP5.82□□□□□ -1.48
ASM4YDL088C LEU1P07264 779 aaKnown RBP5.82□□□□□ -1.48
ASM4YDL088C CPS1P27614 576 aa5.82□□□□□ -1.48
ASM4YDL088C VAN1P23642 535 aa5.81□□□□□ -1.48
ASM4YDL088C SPR3P41901 512 aa5.81□□□□□ -1.48
ASM4YDL088C ROM1P53046 1155 aa5.81□□□□□ -1.48
ASM4YDL088C RGP1P16664 663 aa5.8□□□□□ -1.48
ASM4YDL088C CWH41P53008 833 aa5.8□□□□□ -1.48
ASM4YDL088C MTO1P53070 669 aa5.8□□□□□ -1.48
ASM4YDL088C UBP1P25037 809 aa5.8□□□□□ -1.48
ASM4YDL088C ALD2P47771 506 aa5.8□□□□□ -1.48
ASM4YDL088C YNR014WP53719 212 aa5.8□□□□□ -1.48
ASM4YDL088C NGR1P32831 672 aaKnown RBP5.79□□□□□ -1.48
ASM4YDL088C SCD5P34758 872 aa5.79□□□□□ -1.48
ASM4YDL088C UBX7P38349 436 aa5.79□□□□□ -1.48
ASM4YDL088C GPM1P00950 247 aaKnown RBP5.78□□□□□ -1.48
ASM4YDL088C SBE2P42223 864 aaKnown RBP5.78□□□□□ -1.48
ASM4YDL088C TRS33Q99394 268 aa5.78□□□□□ -1.48
ASM4YDL088C YFL066CP43538 392 aa5.77□□□□□ -1.49
ASM4YDL088C LSB3P43603 459 aaKnown RBP5.76□□□□□ -1.49
ASM4YDL088C TY1A-DR2Q03964 440 aaKnown RBP5.76□□□□□ -1.49
ASM4YDL088C UTP4Q06679 776 aaKnown RBP5.76□□□□□ -1.49
ASM4YDL088C MET1P36150 593 aa5.75□□□□□ -1.49
ASM4YDL088C TDA6Q06466 467 aa5.75□□□□□ -1.49
ASM4YDL088C YPR053CQ6Q5F3 151 aa5.75□□□□□ -1.49
ASM4YDL088C PDC5P16467 563 aaKnown RBP5.74□□□□□ -1.49
ASM4YDL088C KAP122P32767 1081 aa5.74□□□□□ -1.49
ASM4YDL088C HXT5P38695 592 aa5.74□□□□□ -1.49
ASM4YDL088C BOI2P39969 1040 aa5.74□□□□□ -1.49
ASM4YDL088C SSA4P22202 642 aaKnown RBP5.73□□□□□ -1.49
ASM4YDL088C KNS1P32350 737 aaPredicted RBP5.73□□□□□ -1.49
ASM4YDL088C NCL1P38205 684 aaKnown RBP5.73□□□□□ -1.49
ASM4YDL088C FOX2Q02207 900 aaKnown RBP5.73□□□□□ -1.49
ASM4YDL088C YMR187CQ03236 431 aa5.73□□□□□ -1.49
ASM4YDL088C PUP1P25043 261 aa5.72□□□□□ -1.49
ASM4YDL088C HEH2Q03281 663 aa5.72□□□□□ -1.49
ASM4YDL088C MSC7P38694 644 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms