RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	TPD3	P31383	635 aa		7.77	□□□□□ -1.17
ROX3	YBL093C	LTE1	P07866	1435 aa		7.77	□□□□□ -1.17
ROX3	YBL093C	SSM4	P40318	1319 aa		7.77	□□□□□ -1.17
ROX3	YBL093C	NUP157	P40064	1391 aa	Known RBP	7.76	□□□□□ -1.17
ROX3	YBL093C	SEC7	P11075	2009 aa	Known RBP	7.76	□□□□□ -1.17
ROX3	YBL093C	MAK16	P10962	306 aa	Predicted RBP	7.74	□□□□□ -1.17
ROX3	YBL093C	RRD1	P40454	393 aa	Known RBP	7.74	□□□□□ -1.17
ROX3	YBL093C	BUD3	P25558	1636 aa		7.74	□□□□□ -1.17
ROX3	YBL093C	YJL007C	P47080	104 aa		7.73	□□□□□ -1.17
ROX3	YBL093C	BNI1	P41832	1953 aa		7.73	□□□□□ -1.17
ROX3	YBL093C	PUS5	Q06244	254 aa		7.72	□□□□□ -1.17
ROX3	YBL093C	IQG1	Q12280	1495 aa		7.71	□□□□□ -1.18
ROX3	YBL093C	SRB8	P25648	1427 aa		7.7	□□□□□ -1.18
ROX3	YBL093C	YSP2	Q06681	1438 aa		7.69	□□□□□ -1.18
ROX3	YBL093C	KIP2	P28743	706 aa		7.69	□□□□□ -1.18
ROX3	YBL093C	DOP1	Q03921	1698 aa		7.68	□□□□□ -1.18
ROX3	YBL093C	SPT5	P27692	1063 aa	Known RBP	7.68	□□□□□ -1.18
ROX3	YBL093C	SYH1	Q02875	849 aa	Known RBP	7.68	□□□□□ -1.18
ROX3	YBL093C	HED1	Q03937	162 aa		7.68	□□□□□ -1.18
ROX3	YBL093C	BIM1	P40013	344 aa		7.67	□□□□□ -1.18
ROX3	YBL093C	NAF1	P53919	492 aa	Known RBP	7.67	□□□□□ -1.18
ROX3	YBL093C	VAC17	P25591	423 aa		7.66	□□□□□ -1.18
ROX3	YBL093C	TEC1	P18412	486 aa		7.65	□□□□□ -1.18
ROX3	YBL093C	CHC1	P22137	1653 aa	Known RBP	7.65	□□□□□ -1.18
ROX3	YBL093C	IXR1	P33417	597 aa		7.65	□□□□□ -1.18
ROX3	YBL093C	FIG4	P42837	879 aa		7.65	□□□□□ -1.18
ROX3	YBL093C	YNL108C	P53929	270 aa		7.65	□□□□□ -1.18
ROX3	YBL093C	GCN2	P15442	1659 aa		7.64	□□□□□ -1.19
ROX3	YBL093C	YDJ1	P25491	409 aa	Known RBP	7.64	□□□□□ -1.19
ROX3	YBL093C	BIO2	P32451	375 aa		7.64	□□□□□ -1.19
ROX3	YBL093C	CLA4	P48562	842 aa		7.64	□□□□□ -1.19
ROX3	YBL093C	DRS2	P39524	1355 aa		7.63	□□□□□ -1.19
ROX3	YBL093C	RPL34B	P40525	121 aa	Known RBP	7.63	□□□□□ -1.19
ROX3	YBL093C	GUT2	P32191	649 aa		7.62	□□□□□ -1.19
ROX3	YBL093C	ATG32	P40458	529 aa		7.62	□□□□□ -1.19
ROX3	YBL093C	MMS1	Q06211	1407 aa		7.61	□□□□□ -1.19
ROX3	YBL093C	TRM3	Q07527	1436 aa		7.61	□□□□□ -1.19
ROX3	YBL093C	SUP45	P12385	437 aa	Known RBP	7.6	□□□□□ -1.19
ROX3	YBL093C	AIR1	P40507	360 aa	Known RBP	7.6	□□□□□ -1.19
ROX3	YBL093C	STE20	Q03497	939 aa	Known RBP	7.6	□□□□□ -1.19
ROX3	YBL093C	ITT1	Q04638	464 aa		7.6	□□□□□ -1.19
ROX3	YBL093C	CDC4	P07834	779 aa		7.59	□□□□□ -1.19
ROX3	YBL093C	TIF1	P10081	395 aa	Known RBP	7.59	□□□□□ -1.19
ROX3	YBL093C	BNR1	P40450	1375 aa		7.59	□□□□□ -1.2
ROX3	YBL093C	YPP1	P46951	817 aa		7.58	□□□□□ -1.2
ROX3	YBL093C	ENO2	P00925	437 aa	Known RBP	7.57	□□□□□ -1.2
ROX3	YBL093C	TRK1	P12685	1235 aa		7.57	□□□□□ -1.2
ROX3	YBL093C	RTG2	P32608	588 aa	Known RBP	7.57	□□□□□ -1.2
ROX3	YBL093C	YPR084W	Q06821	456 aa		7.57	□□□□□ -1.2
ROX3	YBL093C	MCM16	Q12262	181 aa		7.57	□□□□□ -1.2
ROX3	YBL093C	ISF1	P32488	338 aa		7.56	□□□□□ -1.2
ROX3	YBL093C	EMP47	P43555	445 aa		7.56	□□□□□ -1.2
ROX3	YBL093C	FRA1	Q07825	749 aa		7.56	□□□□□ -1.2
ROX3	YBL093C	YOR093C	Q12275	1648 aa		7.56	□□□□□ -1.2
ROX3	YBL093C	MRX12	P47084	519 aa		7.55	□□□□□ -1.2
ROX3	YBL093C	BUD21	Q08492	214 aa	Predicted RBP	7.55	□□□□□ -1.2
ROX3	YBL093C	MET32	Q12041	191 aa		7.55	□□□□□ -1.2
ROX3	YBL093C	ASH1	P34233	588 aa		7.54	□□□□□ -1.2
ROX3	YBL093C	HST3	P53687	447 aa		7.54	□□□□□ -1.2
ROX3	YBL093C	MRT4	P33201	236 aa	Known RBP	7.53	□□□□□ -1.2
ROX3	YBL093C	APP1	P53933	587 aa		7.53	□□□□□ -1.2
ROX3	YBL093C	SRC1	Q03707	834 aa		7.53	□□□□□ -1.2
ROX3	YBL093C	DNF2	Q12675	1612 aa		7.52	□□□□□ -1.2
ROX3	YBL093C	NUP188	P52593	1655 aa	Known RBP	7.52	□□□□□ -1.21
ROX3	YBL093C	EMW1	P42842	904 aa	Known RBP	7.52	□□□□□ -1.21
ROX3	YBL093C	PDR5	P33302	1511 aa	Known RBP	7.52	□□□□□ -1.21
ROX3	YBL093C	VMR1	P38735	1592 aa		7.51	□□□□□ -1.21
ROX3	YBL093C	AFT1	P22149	690 aa		7.51	□□□□□ -1.21
ROX3	YBL093C	ENV9	Q08651	330 aa		7.51	□□□□□ -1.21
ROX3	YBL093C	YPR204W	Q08995	1032 aa		7.51	□□□□□ -1.21
ROX3	YBL093C	RIM21	P48565	533 aa		7.5	□□□□□ -1.21
ROX3	YBL093C	RLF2	Q12495	606 aa		7.5	□□□□□ -1.21
ROX3	YBL093C	UGA3	P26370	528 aa		7.49	□□□□□ -1.21
ROX3	YBL093C	ATG3	P40344	310 aa		7.49	□□□□□ -1.21
ROX3	YBL093C	ENO1	P00924	437 aa	Known RBP	7.48	□□□□□ -1.21
ROX3	YBL093C	GCR2	Q01722	534 aa		7.48	□□□□□ -1.21
ROX3	YBL093C	ATG20	Q07528	640 aa		7.48	□□□□□ -1.21
ROX3	YBL093C	MKS1	P34072	584 aa		7.47	□□□□□ -1.21
ROX3	YBL093C	MRX10	Q05648	414 aa		7.47	□□□□□ -1.21
ROX3	YBL093C	YBL086C	P38177	466 aa		7.46	□□□□□ -1.22
ROX3	YBL093C	MSB3	P48566	633 aa	Predicted RBP	7.45	□□□□□ -1.22
ROX3	YBL093C	SOH1	P38633	127 aa		7.44	□□□□□ -1.22
ROX3	YBL093C	UTP13	Q05946	817 aa	Known RBP	7.44	□□□□□ -1.22
ROX3	YBL093C	PDR11	P40550	1411 aa		7.44	□□□□□ -1.22
ROX3	YBL093C	IML1	P47170	1584 aa		7.43	□□□□□ -1.22
ROX3	YBL093C	FBP26	P32604	452 aa		7.43	□□□□□ -1.22
ROX3	YBL093C	BRE2	P43132	505 aa		7.43	□□□□□ -1.22
ROX3	YBL093C	APL6	P46682	809 aa		7.43	□□□□□ -1.22
ROX3	YBL093C	ISR1	Q06098	443 aa	Known RBP	7.43	□□□□□ -1.22
ROX3	YBL093C	YJR115W	P47152	169 aa		7.42	□□□□□ -1.22
ROX3	YBL093C	SRF1	Q12516	437 aa		7.42	□□□□□ -1.22
ROX3	YBL093C	RDS2	P19541	446 aa	Known RBP	7.41	□□□□□ -1.22
ROX3	YBL093C	ISU1	Q03020	165 aa		7.41	□□□□□ -1.22
ROX3	YBL093C	DFG5	Q05031	458 aa		7.41	□□□□□ -1.22
ROX3	YBL093C	BDS1	Q08347	646 aa		7.41	□□□□□ -1.22
ROX3	YBL093C	SIS2	P36024	562 aa		7.4	□□□□□ -1.22
ROX3	YBL093C	RPP2B	P02400	110 aa	Known RBP	7.39	□□□□□ -1.23
ROX3	YBL093C	TTI1	P36097	1038 aa		7.39	□□□□□ -1.23
ROX3	YBL093C	RAV1	P47104	1357 aa		7.38	□□□□□ -1.23
ROX3	YBL093C	ARG82	P07250	355 aa		7.38	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms