RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.17
MACF1-234ENST00000641012 DHX29Q7Z478 1369 aaKnown RBP14.02□□□□□ -0.17
MACF1-234ENST00000641012 SMC4Q9NTJ3 1288 aa14.01□□□□□ -0.17
MACF1-234ENST00000641012 XPCQ01831 940 aaPredicted RBP14.01□□□□□ -0.17
MACF1-234ENST00000641012 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
MACF1-234ENST00000641012 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
MACF1-234ENST00000641012 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
MACF1-234ENST00000641012 APAF1O14727 1248 aa14□□□□□ -0.17
MACF1-234ENST00000641012 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
MACF1-234ENST00000641012 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
MACF1-234ENST00000641012 HMOX1P09601 288 aa14□□□□□ -0.17
MACF1-234ENST00000641012 RAPGEF6Q8TEU7 1601 aa14□□□□□ -0.17
MACF1-234ENST00000641012 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
MACF1-234ENST00000641012 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
MACF1-234ENST00000641012 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
MACF1-234ENST00000641012 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
MACF1-234ENST00000641012 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
MACF1-234ENST00000641012 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
MACF1-234ENST00000641012 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
MACF1-234ENST00000641012 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
MACF1-234ENST00000641012 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
MACF1-234ENST00000641012 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
MACF1-234ENST00000641012 ITPRIPQ8IWB1 547 aa13.98□□□□□ -0.17
MACF1-234ENST00000641012 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
MACF1-234ENST00000641012 MTHFSP49914 203 aa13.97□□□□□ -0.17
MACF1-234ENST00000641012 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
MACF1-234ENST00000641012 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
MACF1-234ENST00000641012 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.18
MACF1-234ENST00000641012 MSH5O43196 834 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 KIAA0556O60303 1618 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 BCL2L13Q9BXK5 485 aa13.95□□□□□ -0.18
MACF1-234ENST00000641012 ADGRF5Q8IZF2 1346 aa13.94□□□□□ -0.18
MACF1-234ENST00000641012 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
MACF1-234ENST00000641012 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
MACF1-234ENST00000641012 TRAPPC8Q9Y2L5 1435 aa13.94□□□□□ -0.18
MACF1-234ENST00000641012 RIPK4P57078 832 aa13.94□□□□□ -0.18
MACF1-234ENST00000641012 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
MACF1-234ENST00000641012 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
MACF1-234ENST00000641012 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
MACF1-234ENST00000641012 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
MACF1-234ENST00000641012 NUDT16Q96DE0 195 aaKnown RBP13.92□□□□□ -0.18
MACF1-234ENST00000641012 DISP1Q96F81 1524 aa13.92□□□□□ -0.18
MACF1-234ENST00000641012 FOXO3O43524 673 aa13.92□□□□□ -0.18
MACF1-234ENST00000641012 HSPA2P54652 639 aa13.92□□□□□ -0.18
MACF1-234ENST00000641012 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
MACF1-234ENST00000641012 KCNJ4P48050 445 aa13.91□□□□□ -0.18
MACF1-234ENST00000641012 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
MACF1-234ENST00000641012 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
MACF1-234ENST00000641012 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
MACF1-234ENST00000641012 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
MACF1-234ENST00000641012 PDE3BQ13370 1112 aa13.9□□□□□ -0.18
MACF1-234ENST00000641012 TNRQ92752 1358 aa13.9□□□□□ -0.18
MACF1-234ENST00000641012 A2MP01023 1474 aa13.9□□□□□ -0.18
MACF1-234ENST00000641012 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
MACF1-234ENST00000641012 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
MACF1-234ENST00000641012 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
MACF1-234ENST00000641012 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
MACF1-234ENST00000641012 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
MACF1-234ENST00000641012 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
MACF1-234ENST00000641012 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
MACF1-234ENST00000641012 FGD1P98174 961 aa13.87□□□□□ -0.19
MACF1-234ENST00000641012 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
MACF1-234ENST00000641012 GORABQ5T7V8 394 aa13.86□□□□□ -0.19
MACF1-234ENST00000641012 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
MACF1-234ENST00000641012 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
MACF1-234ENST00000641012 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
MACF1-234ENST00000641012 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
MACF1-234ENST00000641012 E9PSI1 815 aa13.85□□□□□ -0.19
MACF1-234ENST00000641012 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
MACF1-234ENST00000641012 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 NOS1P29475 1434 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 ABCC10Q5T3U5 1492 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
MACF1-234ENST00000641012 PBRM1Q86U86 1689 aa13.83□□□□□ -0.19
MACF1-234ENST00000641012 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.19
MACF1-234ENST00000641012 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
MACF1-234ENST00000641012 DDX54Q8TDD1 881 aaKnown RBP13.83□□□□□ -0.2
MACF1-234ENST00000641012 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
MACF1-234ENST00000641012 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
MACF1-234ENST00000641012 HMMRO75330 724 aa13.82□□□□□ -0.2
MACF1-234ENST00000641012 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 BECN1Q14457 450 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 G3V3G9 751 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
MACF1-234ENST00000641012 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 UHRF1BP1LA0JNW5 1464 aa13.81□□□□□ -0.2
MACF1-234ENST00000641012 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms