RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 CLTCL1P53675 1640 aa33.61■■■□□ 2.97
GRAMD1B-217ENST00000640939 PPP1R15AO75807 674 aaPredicted RBP33.61■■■□□ 2.97
GRAMD1B-217ENST00000640939 BCANQ96GW7 911 aa33.61■■■□□ 2.97
GRAMD1B-217ENST00000640939 SETD5Q9C0A6 1442 aa33.61■■■□□ 2.97
GRAMD1B-217ENST00000640939 NUTM2DQ5VT03 806 aaPredicted RBP33.6■■■□□ 2.97
GRAMD1B-217ENST00000640939 SLC26A8Q96RN1 970 aa33.6■■■□□ 2.97
GRAMD1B-217ENST00000640939 HDGFP51858 240 aaKnown RBP33.59■■■□□ 2.97
GRAMD1B-217ENST00000640939 FOXD1Q16676 465 aa33.56■■■□□ 2.96
GRAMD1B-217ENST00000640939 PLEKHG1Q9ULL1 1385 aa33.56■■■□□ 2.96
GRAMD1B-217ENST00000640939 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.55■■■□□ 2.96
GRAMD1B-217ENST00000640939 UBAP1LF5GYI3 381 aa33.53■■■□□ 2.96
GRAMD1B-217ENST00000640939 ZNF326Q5BKZ1 582 aaKnown RBP33.52■■■□□ 2.96
GRAMD1B-217ENST00000640939 MPHOSPH9Q99550 1183 aa33.52■■■□□ 2.96
GRAMD1B-217ENST00000640939 LRRC7Q96NW7 1537 aa33.52■■■□□ 2.96
GRAMD1B-217ENST00000640939 RAB3GAP2Q9H2M9 1393 aa33.5■■■□□ 2.95
GRAMD1B-217ENST00000640939 KIF1BO60333 1816 aa33.5■■■□□ 2.95
GRAMD1B-217ENST00000640939 KCNA6P17658 529 aa33.44■■■□□ 2.94
GRAMD1B-217ENST00000640939 ACIN1Q9UKV3 1341 aaKnown RBP33.42■■■□□ 2.94
GRAMD1B-217ENST00000640939 ADAMTS13Q76LX8 1427 aa33.41■■■□□ 2.94
GRAMD1B-217ENST00000640939 NEXMIFQ5QGS0 1516 aa33.39■■■□□ 2.94
GRAMD1B-217ENST00000640939 TBX22Q9Y458 520 aa33.39■■■□□ 2.94
GRAMD1B-217ENST00000640939 XIRP1Q702N8 1843 aaKnown RBP33.39■■■□□ 2.94
GRAMD1B-217ENST00000640939 NWD1Q149M9 1564 aa33.38■■■□□ 2.93
GRAMD1B-217ENST00000640939 TOM1O60784 492 aa33.36■■■□□ 2.93
GRAMD1B-217ENST00000640939 CHD2O14647 1828 aaKnown RBP33.36■■■□□ 2.93
GRAMD1B-217ENST00000640939 DIP2AQ14689 1571 aa33.35■■■□□ 2.93
GRAMD1B-217ENST00000640939 PIP4K2BP78356 416 aa33.35■■■□□ 2.93
GRAMD1B-217ENST00000640939 SCAF1Q9H7N4 1312 aaKnown RBP33.34■■■□□ 2.93
GRAMD1B-217ENST00000640939 PROSER2Q86WR7 435 aaPredicted RBP33.34■■■□□ 2.93
GRAMD1B-217ENST00000640939 CCDC144AA2RUR9 1427 aa33.34■■■□□ 2.93
GRAMD1B-217ENST00000640939 ALKQ9UM73 1620 aa33.33■■■□□ 2.93
GRAMD1B-217ENST00000640939 NRXN3Q9Y4C0 1643 aa33.33■■■□□ 2.93
GRAMD1B-217ENST00000640939 RBM33Q96EV2 1170 aaKnown RBP33.33■■■□□ 2.93
GRAMD1B-217ENST00000640939 TMEM94Q12767 1356 aa33.33■■■□□ 2.93
GRAMD1B-217ENST00000640939 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
GRAMD1B-217ENST00000640939 SETBP1Q9Y6X0 1596 aa33.31■■■□□ 2.92
GRAMD1B-217ENST00000640939 PIK3R4Q99570 1358 aa33.25■■■□□ 2.91
GRAMD1B-217ENST00000640939 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
GRAMD1B-217ENST00000640939 PPLO60437 1756 aa33.24■■■□□ 2.91
GRAMD1B-217ENST00000640939 PTPRUQ92729 1446 aa33.23■■■□□ 2.91
GRAMD1B-217ENST00000640939 HRCP23327 699 aa33.23■■■□□ 2.91
GRAMD1B-217ENST00000640939 RGL3Q3MIN7 710 aa33.23■■■□□ 2.91
GRAMD1B-217ENST00000640939 SPATA31E1Q6ZUB1 1445 aa33.22■■■□□ 2.91
GRAMD1B-217ENST00000640939 VGFO15240 615 aaPredicted RBP33.22■■■□□ 2.91
GRAMD1B-217ENST00000640939 AMOTL2Q9Y2J4 779 aa33.2■■■□□ 2.91
GRAMD1B-217ENST00000640939 METP08581 1390 aa33.2■■■□□ 2.9
GRAMD1B-217ENST00000640939 HSPA1LP34931 641 aa33.14■■■□□ 2.9
GRAMD1B-217ENST00000640939 XRN1Q8IZH2 1706 aaKnown RBP33.14■■■□□ 2.89
GRAMD1B-217ENST00000640939 MSH6P52701 1360 aa33.12■■■□□ 2.89
GRAMD1B-217ENST00000640939 IFT172Q9UG01 1749 aa33.12■■■□□ 2.89
GRAMD1B-217ENST00000640939 SETD1AO15047 1707 aaKnown RBP33.11■■■□□ 2.89
GRAMD1B-217ENST00000640939 ANKRD30BQ9BXX2 1392 aa33.11■■■□□ 2.89
GRAMD1B-217ENST00000640939 ADGRF5Q8IZF2 1346 aa33.1■■■□□ 2.89
GRAMD1B-217ENST00000640939 C14orf37Q86TY3 774 aa33.1■■■□□ 2.89
GRAMD1B-217ENST00000640939 NCOA3Q9Y6Q9 1424 aa33.06■■■□□ 2.88
GRAMD1B-217ENST00000640939 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.01■■■□□ 2.87
GRAMD1B-217ENST00000640939 C19orf44Q9H6X5 657 aa32.99■■■□□ 2.87
GRAMD1B-217ENST00000640939 FAM135BQ49AJ0 1406 aa32.99■■■□□ 2.87
GRAMD1B-217ENST00000640939 SLAIN2Q9P270 581 aa32.98■■■□□ 2.87
GRAMD1B-217ENST00000640939 ROBO1Q9Y6N7 1651 aa32.97■■■□□ 2.87
GRAMD1B-217ENST00000640939 PIK3C2GO75747 1445 aa32.96■■■□□ 2.87
GRAMD1B-217ENST00000640939 ATF3P18847 181 aa32.94■■■□□ 2.86
GRAMD1B-217ENST00000640939 ROBO2Q9HCK4 1378 aa32.93■■■□□ 2.86
GRAMD1B-217ENST00000640939 CADPS2Q86UW7 1296 aa32.92■■■□□ 2.86
GRAMD1B-217ENST00000640939 PTCH1Q13635 1447 aa32.92■■■□□ 2.86
GRAMD1B-217ENST00000640939 MYOM2P54296 1465 aa32.92■■■□□ 2.86
GRAMD1B-217ENST00000640939 NRXN1Q9ULB1 1477 aa32.9■■■□□ 2.86
GRAMD1B-217ENST00000640939 ASXL1Q8IXJ9 1541 aa32.89■■■□□ 2.86
GRAMD1B-217ENST00000640939 TMEM132EQ6IEE7 984 aa32.89■■■□□ 2.86
GRAMD1B-217ENST00000640939 NALCNQ8IZF0 1738 aa32.88■■■□□ 2.85
GRAMD1B-217ENST00000640939 ADGRL3Q9HAR2 1447 aa32.88■■■□□ 2.85
GRAMD1B-217ENST00000640939 PRAG1Q86YV5 1406 aa32.87■■■□□ 2.85
GRAMD1B-217ENST00000640939 STK26Q9P289 416 aa32.87■■■□□ 2.85
GRAMD1B-217ENST00000640939 DCCP43146 1447 aa32.85■■■□□ 2.85
GRAMD1B-217ENST00000640939 DISP3Q9P2K9 1392 aa32.85■■■□□ 2.85
GRAMD1B-217ENST00000640939 KDM2AQ9Y2K7 1162 aa32.85■■■□□ 2.85
GRAMD1B-217ENST00000640939 CFAP70Q5T0N1 1121 aa32.84■■■□□ 2.85
GRAMD1B-217ENST00000640939 DCAF11Q8TEB1 546 aa32.84■■■□□ 2.85
GRAMD1B-217ENST00000640939 C14orf93Q9H972 538 aaKnown RBP32.84■■■□□ 2.85
GRAMD1B-217ENST00000640939 LRPPRCP42704 1394 aaKnown RBP32.83■■■□□ 2.85
GRAMD1B-217ENST00000640939 TRIM26Q12899 539 aaPredicted RBP32.81■■■□□ 2.84
GRAMD1B-217ENST00000640939 DHX57Q6P158 1386 aaKnown RBP32.8■■■□□ 2.84
GRAMD1B-217ENST00000640939 LAMC1P11047 1609 aa32.8■■■□□ 2.84
GRAMD1B-217ENST00000640939 MST1RQ04912 1400 aa32.78■■■□□ 2.84
GRAMD1B-217ENST00000640939 YTHDC2Q9H6S0 1430 aaKnown RBP32.78■■■□□ 2.84
GRAMD1B-217ENST00000640939 TECPR2O15040 1411 aa32.77■■■□□ 2.84
GRAMD1B-217ENST00000640939 PHLPP1O60346 1717 aa32.77■■■□□ 2.84
GRAMD1B-217ENST00000640939 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
GRAMD1B-217ENST00000640939 ABCC11Q96J66 1382 aa32.76■■■□□ 2.83
GRAMD1B-217ENST00000640939 WAPLQ7Z5K2 1190 aa32.75■■■□□ 2.83
GRAMD1B-217ENST00000640939 MED1Q15648 1581 aaPredicted RBP32.75■■■□□ 2.83
GRAMD1B-217ENST00000640939 BRINP3Q76B58 766 aa32.74■■■□□ 2.83
GRAMD1B-217ENST00000640939 PLEKHH1Q9ULM0 1364 aa32.72■■■□□ 2.83
GRAMD1B-217ENST00000640939 STAC3Q96MF2 364 aa32.69■■■□□ 2.82
GRAMD1B-217ENST00000640939 COL16A1Q07092 1604 aaPredicted RBP32.68■■■□□ 2.82
GRAMD1B-217ENST00000640939 AHDC1Q5TGY3 1603 aaPredicted RBP32.67■■■□□ 2.82
GRAMD1B-217ENST00000640939 C1orf167Q5SNV9 1468 aa32.67■■■□□ 2.82
GRAMD1B-217ENST00000640939 ADGRB1O14514 1584 aa32.66■■■□□ 2.82
GRAMD1B-217ENST00000640939 SIN3AQ96ST3 1273 aa32.65■■■□□ 2.82
GRAMD1B-217ENST00000640939 CDC42BPGQ6DT37 1551 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms