RNA–Protein interactions for RNA: ENST00000640714.1

CNTN2-233, Transcript of contactin 2, human

TSL 2

Gene CNTN2, Length 633 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-233	ENST00000640714	TRIM52	Q96A61	297 aa		10.9	□□□□□ -0.66
CNTN2-233	ENST00000640714	BCAN	Q96GW7	911 aa		10.9	□□□□□ -0.66
CNTN2-233	ENST00000640714	SCAF1	Q9H7N4	1312 aa	Known RBP	10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	TOM1	O60784	492 aa		10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	PIP4K2B	P78356	416 aa		10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	SPHKAP	Q2M3C7	1700 aa		10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	PLEKHG1	Q9ULL1	1385 aa		10.89	□□□□□ -0.67
CNTN2-233	ENST00000640714	ALK	Q9UM73	1620 aa		10.88	□□□□□ -0.67
CNTN2-233	ENST00000640714	KCNA6	P17658	529 aa		10.87	□□□□□ -0.67
CNTN2-233	ENST00000640714	HDGF	P51858	240 aa	Known RBP	10.87	□□□□□ -0.67
CNTN2-233	ENST00000640714	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
CNTN2-233	ENST00000640714	CLTCL1	P53675	1640 aa		10.86	□□□□□ -0.67
CNTN2-233	ENST00000640714	TRPM2	O94759	1503 aa		10.85	□□□□□ -0.67
CNTN2-233	ENST00000640714	RBM33	Q96EV2	1170 aa	Known RBP	10.85	□□□□□ -0.67
CNTN2-233	ENST00000640714	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.85	□□□□□ -0.67
CNTN2-233	ENST00000640714	XIRP1	Q702N8	1843 aa	Known RBP	10.85	□□□□□ -0.67
CNTN2-233	ENST00000640714	TMEM94	Q12767	1356 aa		10.85	□□□□□ -0.67
CNTN2-233	ENST00000640714	HSPA1L	P34931	641 aa		10.84	□□□□□ -0.67
CNTN2-233	ENST00000640714	ZNF326	Q5BKZ1	582 aa	Known RBP	10.84	□□□□□ -0.67
CNTN2-233	ENST00000640714	PROSER2	Q86WR7	435 aa	Predicted RBP	10.84	□□□□□ -0.67
CNTN2-233	ENST00000640714	NWD1	Q149M9	1564 aa		10.84	□□□□□ -0.67
CNTN2-233	ENST00000640714	ADAMTS13	Q76LX8	1427 aa		10.84	□□□□□ -0.67
CNTN2-233	ENST00000640714	TBX22	Q9Y458	520 aa		10.83	□□□□□ -0.68
CNTN2-233	ENST00000640714	NKTR	P30414	1462 aa	Known RBP	10.82	□□□□□ -0.68
CNTN2-233	ENST00000640714	FOXD1	Q16676	465 aa		10.82	□□□□□ -0.68
CNTN2-233	ENST00000640714	CHD2	O14647	1828 aa	Known RBP	10.81	□□□□□ -0.68
CNTN2-233	ENST00000640714	DIP2A	Q14689	1571 aa		10.81	□□□□□ -0.68
CNTN2-233	ENST00000640714	DISP3	Q9P2K9	1392 aa		10.8	□□□□□ -0.68
CNTN2-233	ENST00000640714	NEXMIF	Q5QGS0	1516 aa		10.8	□□□□□ -0.68
CNTN2-233	ENST00000640714	KIF1B	O60333	1816 aa		10.8	□□□□□ -0.68
CNTN2-233	ENST00000640714	MPHOSPH9	Q99550	1183 aa		10.8	□□□□□ -0.68
CNTN2-233	ENST00000640714	NRXN3	Q9Y4C0	1643 aa		10.8	□□□□□ -0.68
CNTN2-233	ENST00000640714	SETBP1	Q9Y6X0	1596 aa		10.79	□□□□□ -0.68
CNTN2-233	ENST00000640714	SETD5	Q9C0A6	1442 aa		10.79	□□□□□ -0.68
CNTN2-233	ENST00000640714	PIK3R4	Q99570	1358 aa		10.78	□□□□□ -0.68
CNTN2-233	ENST00000640714	PTPRU	Q92729	1446 aa		10.78	□□□□□ -0.68
CNTN2-233	ENST00000640714	MSH6	P52701	1360 aa		10.77	□□□□□ -0.68
CNTN2-233	ENST00000640714	AMOTL2	Q9Y2J4	779 aa		10.77	□□□□□ -0.69
CNTN2-233	ENST00000640714	MET	P08581	1390 aa		10.77	□□□□□ -0.69
CNTN2-233	ENST00000640714	RAB3GAP2	Q9H2M9	1393 aa		10.76	□□□□□ -0.69
CNTN2-233	ENST00000640714	CCDC144A	A2RUR9	1427 aa		10.75	□□□□□ -0.69
CNTN2-233	ENST00000640714	FAM135B	Q49AJ0	1406 aa		10.75	□□□□□ -0.69
CNTN2-233	ENST00000640714	C14orf37	Q86TY3	774 aa		10.75	□□□□□ -0.69
CNTN2-233	ENST00000640714	VGF	O15240	615 aa	Predicted RBP	10.74	□□□□□ -0.69
CNTN2-233	ENST00000640714	XRN1	Q8IZH2	1706 aa	Known RBP	10.74	□□□□□ -0.69
CNTN2-233	ENST00000640714	RPGRIP1L	Q68CZ1	1315 aa		10.74	□□□□□ -0.69
CNTN2-233	ENST00000640714	NCOA3	Q9Y6Q9	1424 aa		10.74	□□□□□ -0.69
CNTN2-233	ENST00000640714	ROBO1	Q9Y6N7	1651 aa		10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	PPL	O60437	1756 aa		10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	RGL3	Q3MIN7	710 aa		10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	SLAIN2	Q9P270	581 aa		10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	ACIN1	Q9UKV3	1341 aa	Known RBP	10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	SPATA31E1	Q6ZUB1	1445 aa		10.73	□□□□□ -0.69
CNTN2-233	ENST00000640714	ILDR2	Q71H61	639 aa		10.72	□□□□□ -0.69
CNTN2-233	ENST00000640714	C19orf44	Q9H6X5	657 aa		10.72	□□□□□ -0.69
CNTN2-233	ENST00000640714	MED1	Q15648	1581 aa	Predicted RBP	10.72	□□□□□ -0.69
CNTN2-233	ENST00000640714	SETD1A	O15047	1707 aa	Known RBP	10.71	□□□□□ -0.69
CNTN2-233	ENST00000640714	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.71	□□□□□ -0.69
CNTN2-233	ENST00000640714	ADGRF5	Q8IZF2	1346 aa		10.7	□□□□□ -0.7
CNTN2-233	ENST00000640714	ATF3	P18847	181 aa		10.7	□□□□□ -0.7
CNTN2-233	ENST00000640714	CADPS2	Q86UW7	1296 aa		10.7	□□□□□ -0.7
CNTN2-233	ENST00000640714	PHF23	Q9BUL5	403 aa	Predicted RBP	10.69	□□□□□ -0.7
CNTN2-233	ENST00000640714	ANKRD30B	Q9BXX2	1392 aa		10.68	□□□□□ -0.7
CNTN2-233	ENST00000640714	ROBO2	Q9HCK4	1378 aa		10.68	□□□□□ -0.7
CNTN2-233	ENST00000640714	DCC	P43146	1447 aa		10.67	□□□□□ -0.7
CNTN2-233	ENST00000640714	PTCH1	Q13635	1447 aa		10.67	□□□□□ -0.7
CNTN2-233	ENST00000640714	ADGRL3	Q9HAR2	1447 aa		10.67	□□□□□ -0.7
CNTN2-233	ENST00000640714	IFT172	Q9UG01	1749 aa		10.67	□□□□□ -0.7
CNTN2-233	ENST00000640714	PHLPP1	O60346	1717 aa		10.67	□□□□□ -0.7
CNTN2-233	ENST00000640714	HRC	P23327	699 aa		10.66	□□□□□ -0.7
CNTN2-233	ENST00000640714	NALCN	Q8IZF0	1738 aa		10.66	□□□□□ -0.7
CNTN2-233	ENST00000640714	MST1R	Q04912	1400 aa		10.66	□□□□□ -0.7
CNTN2-233	ENST00000640714	PRAG1	Q86YV5	1406 aa		10.66	□□□□□ -0.7
CNTN2-233	ENST00000640714	BRINP3	Q76B58	766 aa		10.65	□□□□□ -0.7
CNTN2-233	ENST00000640714	PIK3C2G	O75747	1445 aa		10.65	□□□□□ -0.7
CNTN2-233	ENST00000640714	ASXL1	Q8IXJ9	1541 aa		10.64	□□□□□ -0.71
CNTN2-233	ENST00000640714	TMEM132E	Q6IEE7	984 aa		10.64	□□□□□ -0.71
CNTN2-233	ENST00000640714	STK26	Q9P289	416 aa		10.64	□□□□□ -0.71
CNTN2-233	ENST00000640714	COL16A1	Q07092	1604 aa	Predicted RBP	10.64	□□□□□ -0.71
CNTN2-233	ENST00000640714	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.63	□□□□□ -0.71
CNTN2-233	ENST00000640714	LRPPRC	P42704	1394 aa	Known RBP	10.63	□□□□□ -0.71
CNTN2-233	ENST00000640714	JCAD	Q9P266	1359 aa		10.63	□□□□□ -0.71
CNTN2-233	ENST00000640714	MYOM2	P54296	1465 aa		10.62	□□□□□ -0.71
CNTN2-233	ENST00000640714	NRXN1	Q9ULB1	1477 aa		10.62	□□□□□ -0.71
CNTN2-233	ENST00000640714	TECPR2	O15040	1411 aa		10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	SOCS7	O14512	581 aa		10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	CFAP70	Q5T0N1	1121 aa		10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	C14orf93	Q9H972	538 aa	Known RBP	10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	ABCC11	Q96J66	1382 aa		10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	C1orf167	Q5SNV9	1468 aa		10.61	□□□□□ -0.71
CNTN2-233	ENST00000640714	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.6	□□□□□ -0.71
CNTN2-233	ENST00000640714	WAPL	Q7Z5K2	1190 aa		10.6	□□□□□ -0.71
CNTN2-233	ENST00000640714	DDX17	Q92841	729 aa	Known RBP	10.6	□□□□□ -0.71
CNTN2-233	ENST00000640714	RGS17	Q9UGC6	210 aa	Predicted RBP	10.6	□□□□□ -0.71
CNTN2-233	ENST00000640714	PLEKHH1	Q9ULM0	1364 aa		10.6	□□□□□ -0.71
CNTN2-233	ENST00000640714	NHSL1	Q5SYE7	1610 aa		10.58	□□□□□ -0.72
CNTN2-233	ENST00000640714	KNDC1	Q76NI1	1749 aa		10.58	□□□□□ -0.72
CNTN2-233	ENST00000640714	CDC42BPG	Q6DT37	1551 aa		10.58	□□□□□ -0.72
CNTN2-233	ENST00000640714	DCAF11	Q8TEB1	546 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms