RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
PAX6-272ENST00000640460 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
PAX6-272ENST00000640460 MPHOSPH9Q99550 1183 aa18.57■□□□□ 0.56
PAX6-272ENST00000640460 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
PAX6-272ENST00000640460 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
PAX6-272ENST00000640460 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
PAX6-272ENST00000640460 TRPM2O94759 1503 aa18.55■□□□□ 0.56
PAX6-272ENST00000640460 FOXD1Q16676 465 aa18.54■□□□□ 0.56
PAX6-272ENST00000640460 KIF1BO60333 1816 aa18.53■□□□□ 0.56
PAX6-272ENST00000640460 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
PAX6-272ENST00000640460 LRRC7Q96NW7 1537 aa18.52■□□□□ 0.56
PAX6-272ENST00000640460 PLEKHG1Q9ULL1 1385 aa18.51■□□□□ 0.55
PAX6-272ENST00000640460 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
PAX6-272ENST00000640460 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
PAX6-272ENST00000640460 NUTM2DQ5VT03 806 aaPredicted RBP18.49■□□□□ 0.55
PAX6-272ENST00000640460 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
PAX6-272ENST00000640460 CHD2O14647 1828 aaKnown RBP18.48■□□□□ 0.55
PAX6-272ENST00000640460 UBAP1LF5GYI3 381 aa18.48■□□□□ 0.55
PAX6-272ENST00000640460 NWD1Q149M9 1564 aa18.48■□□□□ 0.55
PAX6-272ENST00000640460 ALKQ9UM73 1620 aa18.48■□□□□ 0.55
PAX6-272ENST00000640460 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
PAX6-272ENST00000640460 HDGFP51858 240 aaKnown RBP18.47■□□□□ 0.55
PAX6-272ENST00000640460 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
PAX6-272ENST00000640460 BCANQ96GW7 911 aa18.45■□□□□ 0.54
PAX6-272ENST00000640460 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
PAX6-272ENST00000640460 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
PAX6-272ENST00000640460 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
PAX6-272ENST00000640460 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
PAX6-272ENST00000640460 KCNA6P17658 529 aa18.43■□□□□ 0.54
PAX6-272ENST00000640460 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
PAX6-272ENST00000640460 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
PAX6-272ENST00000640460 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
PAX6-272ENST00000640460 SETBP1Q9Y6X0 1596 aa18.41■□□□□ 0.54
PAX6-272ENST00000640460 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
PAX6-272ENST00000640460 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
PAX6-272ENST00000640460 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
PAX6-272ENST00000640460 PPLO60437 1756 aa18.4■□□□□ 0.54
PAX6-272ENST00000640460 TOM1O60784 492 aa18.39■□□□□ 0.53
PAX6-272ENST00000640460 TMEM94Q12767 1356 aa18.37■□□□□ 0.53
PAX6-272ENST00000640460 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
PAX6-272ENST00000640460 RBM33Q96EV2 1170 aaKnown RBP18.36■□□□□ 0.53
PAX6-272ENST00000640460 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
PAX6-272ENST00000640460 PROSER2Q86WR7 435 aaPredicted RBP18.35■□□□□ 0.53
PAX6-272ENST00000640460 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
PAX6-272ENST00000640460 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
PAX6-272ENST00000640460 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
PAX6-272ENST00000640460 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
PAX6-272ENST00000640460 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
PAX6-272ENST00000640460 XRN1Q8IZH2 1706 aaKnown RBP18.34■□□□□ 0.53
PAX6-272ENST00000640460 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
PAX6-272ENST00000640460 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
PAX6-272ENST00000640460 METP08581 1390 aa18.3■□□□□ 0.52
PAX6-272ENST00000640460 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
PAX6-272ENST00000640460 HSPA1LP34931 641 aa18.29■□□□□ 0.52
PAX6-272ENST00000640460 RGL3Q3MIN7 710 aa18.28■□□□□ 0.52
PAX6-272ENST00000640460 AMOTL2Q9Y2J4 779 aa18.28■□□□□ 0.52
PAX6-272ENST00000640460 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.27■□□□□ 0.52
PAX6-272ENST00000640460 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
PAX6-272ENST00000640460 MSH6P52701 1360 aa18.26■□□□□ 0.51
PAX6-272ENST00000640460 ROBO1Q9Y6N7 1651 aa18.26■□□□□ 0.51
PAX6-272ENST00000640460 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
PAX6-272ENST00000640460 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
PAX6-272ENST00000640460 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
PAX6-272ENST00000640460 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
PAX6-272ENST00000640460 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
PAX6-272ENST00000640460 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
PAX6-272ENST00000640460 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
PAX6-272ENST00000640460 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
PAX6-272ENST00000640460 ASXL1Q8IXJ9 1541 aa18.17■□□□□ 0.5
PAX6-272ENST00000640460 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
PAX6-272ENST00000640460 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
PAX6-272ENST00000640460 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
PAX6-272ENST00000640460 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
PAX6-272ENST00000640460 MYOM2P54296 1465 aa18.16■□□□□ 0.5
PAX6-272ENST00000640460 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
PAX6-272ENST00000640460 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
PAX6-272ENST00000640460 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
PAX6-272ENST00000640460 DCCP43146 1447 aa18.15■□□□□ 0.5
PAX6-272ENST00000640460 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
PAX6-272ENST00000640460 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
PAX6-272ENST00000640460 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
PAX6-272ENST00000640460 ADGRL3Q9HAR2 1447 aa18.14■□□□□ 0.49
PAX6-272ENST00000640460 CADPS2Q86UW7 1296 aa18.14■□□□□ 0.49
PAX6-272ENST00000640460 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
PAX6-272ENST00000640460 ATF3P18847 181 aa18.13■□□□□ 0.49
PAX6-272ENST00000640460 LAMC1P11047 1609 aa18.13■□□□□ 0.49
PAX6-272ENST00000640460 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
PAX6-272ENST00000640460 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
PAX6-272ENST00000640460 MST1RQ04912 1400 aa18.1■□□□□ 0.49
PAX6-272ENST00000640460 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
PAX6-272ENST00000640460 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
PAX6-272ENST00000640460 TECPR2O15040 1411 aa18.09■□□□□ 0.49
PAX6-272ENST00000640460 LRPPRCP42704 1394 aaKnown RBP18.08■□□□□ 0.48
PAX6-272ENST00000640460 STAC3Q96MF2 364 aa18.08■□□□□ 0.48
PAX6-272ENST00000640460 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.48
PAX6-272ENST00000640460 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
PAX6-272ENST00000640460 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
PAX6-272ENST00000640460 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
PAX6-272ENST00000640460 STK26Q9P289 416 aa18.06■□□□□ 0.48
PAX6-272ENST00000640460 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms