RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 API5Q9BZZ5 524 aaKnown RBP13.74□□□□□ -0.21
SCN1B-208ENST00000640135 MSH5O43196 834 aa13.73□□□□□ -0.21
SCN1B-208ENST00000640135 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
SCN1B-208ENST00000640135 KIF3AQ9Y496 699 aa13.73□□□□□ -0.21
SCN1B-208ENST00000640135 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
SCN1B-208ENST00000640135 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
SCN1B-208ENST00000640135 GNAI1P63096 354 aa13.72□□□□□ -0.21
SCN1B-208ENST00000640135 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
SCN1B-208ENST00000640135 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
SCN1B-208ENST00000640135 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
SCN1B-208ENST00000640135 RUNDC1Q96C34 613 aa13.71□□□□□ -0.21
SCN1B-208ENST00000640135 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
SCN1B-208ENST00000640135 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
SCN1B-208ENST00000640135 CD109Q6YHK3 1445 aa13.71□□□□□ -0.21
SCN1B-208ENST00000640135 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.22
SCN1B-208ENST00000640135 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-208ENST00000640135 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-208ENST00000640135 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 RIPK4P57078 832 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-208ENST00000640135 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
SCN1B-208ENST00000640135 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
SCN1B-208ENST00000640135 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
SCN1B-208ENST00000640135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCN1B-208ENST00000640135 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
SCN1B-208ENST00000640135 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
SCN1B-208ENST00000640135 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
SCN1B-208ENST00000640135 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
SCN1B-208ENST00000640135 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
SCN1B-208ENST00000640135 APAF1O14727 1248 aa13.67□□□□□ -0.22
SCN1B-208ENST00000640135 AMOTL1Q8IY63 956 aa13.67□□□□□ -0.22
SCN1B-208ENST00000640135 GBP4Q96PP9 640 aa13.67□□□□□ -0.22
SCN1B-208ENST00000640135 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-208ENST00000640135 EIF2S2P20042 333 aaKnown RBP13.67□□□□□ -0.22
SCN1B-208ENST00000640135 NOP58Q9Y2X3 529 aaKnown RBP13.67□□□□□ -0.22
SCN1B-208ENST00000640135 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-208ENST00000640135 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
SCN1B-208ENST00000640135 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
SCN1B-208ENST00000640135 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
SCN1B-208ENST00000640135 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
SCN1B-208ENST00000640135 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
SCN1B-208ENST00000640135 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
SCN1B-208ENST00000640135 AAMPQ13685 434 aa13.66□□□□□ -0.22
SCN1B-208ENST00000640135 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
SCN1B-208ENST00000640135 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 TSPYL4Q9UJ04 414 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 EPRSP07814 1512 aaKnown RBP13.65□□□□□ -0.22
SCN1B-208ENST00000640135 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 CSPP1Q1MSJ5 1256 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
SCN1B-208ENST00000640135 RUFY2Q8WXA3 655 aa13.64□□□□□ -0.23
SCN1B-208ENST00000640135 WDR62O43379 1518 aa13.64□□□□□ -0.23
SCN1B-208ENST00000640135 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
SCN1B-208ENST00000640135 DNTTIP2Q5QJE6 756 aaKnown RBP13.64□□□□□ -0.23
SCN1B-208ENST00000640135 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
SCN1B-208ENST00000640135 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
SCN1B-208ENST00000640135 DAPK1P53355 1430 aa13.63□□□□□ -0.23
SCN1B-208ENST00000640135 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-208ENST00000640135 SYAP1Q96A49 352 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-208ENST00000640135 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
SCN1B-208ENST00000640135 ST18O60284 1047 aa13.62□□□□□ -0.23
SCN1B-208ENST00000640135 KIF7Q2M1P5 1343 aa13.62□□□□□ -0.23
SCN1B-208ENST00000640135 CLSTN1O94985 981 aa13.62□□□□□ -0.23
SCN1B-208ENST00000640135 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-208ENST00000640135 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-208ENST00000640135 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
SCN1B-208ENST00000640135 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCN1B-208ENST00000640135 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
SCN1B-208ENST00000640135 CHAF1AQ13111 956 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-208ENST00000640135 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
SCN1B-208ENST00000640135 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
SCN1B-208ENST00000640135 RTEL1-TNFRSF6BF6WH68 1400 aa13.61□□□□□ -0.23
SCN1B-208ENST00000640135 CNTLNQ9NXG0 1405 aa13.61□□□□□ -0.23
SCN1B-208ENST00000640135 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
SCN1B-208ENST00000640135 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-208ENST00000640135 SUPT6HQ7KZ85 1726 aaKnown RBP13.6□□□□□ -0.23
SCN1B-208ENST00000640135 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
SCN1B-208ENST00000640135 TRIM34Q9BYJ4 488 aa13.6□□□□□ -0.23
SCN1B-208ENST00000640135 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
SCN1B-208ENST00000640135 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
SCN1B-208ENST00000640135 SYNE3Q6ZMZ3 975 aa13.6□□□□□ -0.23
SCN1B-208ENST00000640135 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
SCN1B-208ENST00000640135 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
SCN1B-208ENST00000640135 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
SCN1B-208ENST00000640135 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
SCN1B-208ENST00000640135 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
SCN1B-208ENST00000640135 ADGRL1O94910 1474 aa13.59□□□□□ -0.23
SCN1B-208ENST00000640135 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
SCN1B-208ENST00000640135 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
SCN1B-208ENST00000640135 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
SCN1B-208ENST00000640135 MTHFSP49914 203 aa13.58□□□□□ -0.24
SCN1B-208ENST00000640135 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
SCN1B-208ENST00000640135 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
SCN1B-208ENST00000640135 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
SCN1B-208ENST00000640135 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-208ENST00000640135 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms