RNA–Protein interactions for RNA: ENST00000639921.1

GFAP-235, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,226 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-235ENST00000639921 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
GFAP-235ENST00000639921 LTKP29376 864 aa18.2■□□□□ 0.5
GFAP-235ENST00000639921 MED14O60244 1454 aa18.2■□□□□ 0.5
GFAP-235ENST00000639921 BCANQ96GW7 911 aa18.19■□□□□ 0.5
GFAP-235ENST00000639921 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.18■□□□□ 0.5
GFAP-235ENST00000639921 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
GFAP-235ENST00000639921 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
GFAP-235ENST00000639921 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
GFAP-235ENST00000639921 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
GFAP-235ENST00000639921 ANKRD30BQ9BXX2 1392 aa18.12■□□□□ 0.49
GFAP-235ENST00000639921 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
GFAP-235ENST00000639921 ZNF335Q9H4Z2 1342 aaPredicted RBP18.11■□□□□ 0.49
GFAP-235ENST00000639921 PLEKHG1Q9ULL1 1385 aa18.11■□□□□ 0.49
GFAP-235ENST00000639921 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
GFAP-235ENST00000639921 PPLO60437 1756 aa18.1■□□□□ 0.49
GFAP-235ENST00000639921 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
GFAP-235ENST00000639921 SLC26A8Q96RN1 970 aa18.09■□□□□ 0.49
GFAP-235ENST00000639921 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
GFAP-235ENST00000639921 VGFO15240 615 aaPredicted RBP18.06■□□□□ 0.48
GFAP-235ENST00000639921 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
GFAP-235ENST00000639921 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
GFAP-235ENST00000639921 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
GFAP-235ENST00000639921 CERKQ8TCT0 537 aa18.04■□□□□ 0.48
GFAP-235ENST00000639921 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
GFAP-235ENST00000639921 CPS1P31327 1500 aa18.03■□□□□ 0.48
GFAP-235ENST00000639921 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
GFAP-235ENST00000639921 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
GFAP-235ENST00000639921 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
GFAP-235ENST00000639921 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
GFAP-235ENST00000639921 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
GFAP-235ENST00000639921 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
GFAP-235ENST00000639921 KCNA6P17658 529 aa17.98■□□□□ 0.47
GFAP-235ENST00000639921 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
GFAP-235ENST00000639921 NWD1Q149M9 1564 aa17.96■□□□□ 0.47
GFAP-235ENST00000639921 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
GFAP-235ENST00000639921 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
GFAP-235ENST00000639921 MYOM2P54296 1465 aa17.95■□□□□ 0.46
GFAP-235ENST00000639921 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
GFAP-235ENST00000639921 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
GFAP-235ENST00000639921 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
GFAP-235ENST00000639921 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
GFAP-235ENST00000639921 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
GFAP-235ENST00000639921 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
GFAP-235ENST00000639921 LRRC7Q96NW7 1537 aa17.93■□□□□ 0.46
GFAP-235ENST00000639921 SETD1AO15047 1707 aaKnown RBP17.93■□□□□ 0.46
GFAP-235ENST00000639921 PROSER2Q86WR7 435 aaPredicted RBP17.93■□□□□ 0.46
GFAP-235ENST00000639921 METP08581 1390 aa17.92■□□□□ 0.46
GFAP-235ENST00000639921 LAMC1P11047 1609 aa17.91■□□□□ 0.46
GFAP-235ENST00000639921 PIK3C2GO75747 1445 aa17.91■□□□□ 0.46
GFAP-235ENST00000639921 AMOTL2Q9Y2J4 779 aa17.91■□□□□ 0.46
GFAP-235ENST00000639921 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
GFAP-235ENST00000639921 PTPRUQ92729 1446 aa17.89■□□□□ 0.46
GFAP-235ENST00000639921 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.46
GFAP-235ENST00000639921 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
GFAP-235ENST00000639921 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
GFAP-235ENST00000639921 TMEM94Q12767 1356 aa17.89■□□□□ 0.45
GFAP-235ENST00000639921 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
GFAP-235ENST00000639921 FBXO41Q8TF61 875 aa17.87■□□□□ 0.45
GFAP-235ENST00000639921 RBM33Q96EV2 1170 aaKnown RBP17.87■□□□□ 0.45
GFAP-235ENST00000639921 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
GFAP-235ENST00000639921 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
GFAP-235ENST00000639921 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
GFAP-235ENST00000639921 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
GFAP-235ENST00000639921 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
GFAP-235ENST00000639921 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
GFAP-235ENST00000639921 STK26Q9P289 416 aa17.84■□□□□ 0.45
GFAP-235ENST00000639921 TOM1O60784 492 aa17.83■□□□□ 0.44
GFAP-235ENST00000639921 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
GFAP-235ENST00000639921 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
GFAP-235ENST00000639921 MSH6P52701 1360 aa17.82■□□□□ 0.44
GFAP-235ENST00000639921 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
GFAP-235ENST00000639921 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
GFAP-235ENST00000639921 LRPPRCP42704 1394 aaKnown RBP17.8■□□□□ 0.44
GFAP-235ENST00000639921 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
GFAP-235ENST00000639921 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
GFAP-235ENST00000639921 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
GFAP-235ENST00000639921 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
GFAP-235ENST00000639921 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
GFAP-235ENST00000639921 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
GFAP-235ENST00000639921 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
GFAP-235ENST00000639921 PIP4K2BP78356 416 aa17.78■□□□□ 0.44
GFAP-235ENST00000639921 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
GFAP-235ENST00000639921 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.77■□□□□ 0.44
GFAP-235ENST00000639921 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
GFAP-235ENST00000639921 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
GFAP-235ENST00000639921 ADGRB1O14514 1584 aa17.75■□□□□ 0.43
GFAP-235ENST00000639921 TECPR2O15040 1411 aa17.75■□□□□ 0.43
GFAP-235ENST00000639921 ATF3P18847 181 aa17.75■□□□□ 0.43
GFAP-235ENST00000639921 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
GFAP-235ENST00000639921 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
GFAP-235ENST00000639921 TRAK1Q9UPV9 953 aa17.73■□□□□ 0.43
GFAP-235ENST00000639921 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
GFAP-235ENST00000639921 WAPLQ7Z5K2 1190 aa17.72■□□□□ 0.43
GFAP-235ENST00000639921 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
GFAP-235ENST00000639921 POGKQ9P215 609 aa17.72■□□□□ 0.43
GFAP-235ENST00000639921 DLC1Q96QB1 1528 aa17.71■□□□□ 0.43
GFAP-235ENST00000639921 DCCP43146 1447 aa17.71■□□□□ 0.43
GFAP-235ENST00000639921 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
GFAP-235ENST00000639921 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
GFAP-235ENST00000639921 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms