RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 SLC26A8Q96RN1 970 aa29.4■■■□□ 2.3
CROCCP2-205ENST00000639481 RIMS2Q9UQ26 1411 aa29.37■■■□□ 2.29
CROCCP2-205ENST00000639481 NWD1Q149M9 1564 aa29.35■■■□□ 2.29
CROCCP2-205ENST00000639481 ILDR2Q71H61 639 aa29.35■■■□□ 2.29
CROCCP2-205ENST00000639481 SENP3Q9H4L4 574 aaPredicted RBP29.35■■■□□ 2.29
CROCCP2-205ENST00000639481 SPHKAPQ2M3C7 1700 aa29.34■■■□□ 2.29
CROCCP2-205ENST00000639481 NAIPQ13075 1403 aa29.34■■■□□ 2.29
CROCCP2-205ENST00000639481 PLEKHG1Q9ULL1 1385 aa29.32■■■□□ 2.28
CROCCP2-205ENST00000639481 KCNA6P17658 529 aa29.31■■■□□ 2.28
CROCCP2-205ENST00000639481 CHD2O14647 1828 aaKnown RBP29.31■■■□□ 2.28
CROCCP2-205ENST00000639481 CHGAP10645 457 aaKnown RBP29.3■■■□□ 2.28
CROCCP2-205ENST00000639481 TMEM94Q12767 1356 aa29.28■■■□□ 2.28
CROCCP2-205ENST00000639481 NKTRP30414 1462 aaKnown RBP29.26■■■□□ 2.27
CROCCP2-205ENST00000639481 RBM33Q96EV2 1170 aaKnown RBP29.26■■■□□ 2.27
CROCCP2-205ENST00000639481 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
CROCCP2-205ENST00000639481 BCANQ96GW7 911 aa29.25■■■□□ 2.27
CROCCP2-205ENST00000639481 PPP1R15AO75807 674 aaPredicted RBP29.24■■■□□ 2.27
CROCCP2-205ENST00000639481 ADAMTS13Q76LX8 1427 aa29.23■■■□□ 2.27
CROCCP2-205ENST00000639481 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
CROCCP2-205ENST00000639481 CLTCL1P53675 1640 aa29.21■■■□□ 2.27
CROCCP2-205ENST00000639481 HDGFP51858 240 aaKnown RBP29.21■■■□□ 2.27
CROCCP2-205ENST00000639481 PROSER2Q86WR7 435 aaPredicted RBP29.21■■■□□ 2.27
CROCCP2-205ENST00000639481 HFM1A2PYH4 1435 aa29.2■■■□□ 2.27
CROCCP2-205ENST00000639481 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.2■■■□□ 2.26
CROCCP2-205ENST00000639481 TBX22Q9Y458 520 aa29.18■■■□□ 2.26
CROCCP2-205ENST00000639481 DIP2AQ14689 1571 aa29.18■■■□□ 2.26
CROCCP2-205ENST00000639481 NRXN3Q9Y4C0 1643 aa29.17■■■□□ 2.26
CROCCP2-205ENST00000639481 TRPM2O94759 1503 aa29.16■■■□□ 2.26
CROCCP2-205ENST00000639481 ROBO1Q9Y6N7 1651 aa29.13■■■□□ 2.25
CROCCP2-205ENST00000639481 FAM135BQ49AJ0 1406 aa29.11■■■□□ 2.25
CROCCP2-205ENST00000639481 KIF1BO60333 1816 aa29.1■■■□□ 2.25
CROCCP2-205ENST00000639481 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
CROCCP2-205ENST00000639481 PTPRUQ92729 1446 aa29.09■■■□□ 2.25
CROCCP2-205ENST00000639481 NEXMIFQ5QGS0 1516 aa29.09■■■□□ 2.25
CROCCP2-205ENST00000639481 MSH6P52701 1360 aa29.06■■■□□ 2.24
CROCCP2-205ENST00000639481 PIK3R4Q99570 1358 aa29.06■■■□□ 2.24
CROCCP2-205ENST00000639481 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
CROCCP2-205ENST00000639481 ZNF326Q5BKZ1 582 aaKnown RBP29.04■■■□□ 2.24
CROCCP2-205ENST00000639481 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
CROCCP2-205ENST00000639481 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.03■■■□□ 2.24
CROCCP2-205ENST00000639481 SOCS7O14512 581 aa29.02■■■□□ 2.24
CROCCP2-205ENST00000639481 NCOA3Q9Y6Q9 1424 aa29.01■■■□□ 2.23
CROCCP2-205ENST00000639481 SLC4A1APQ9BWU0 796 aaKnown RBP28.99■■■□□ 2.23
CROCCP2-205ENST00000639481 AMOTL2Q9Y2J4 779 aa28.99■■■□□ 2.23
CROCCP2-205ENST00000639481 METP08581 1390 aa28.98■■■□□ 2.23
CROCCP2-205ENST00000639481 SLAIN2Q9P270 581 aa28.97■■■□□ 2.23
CROCCP2-205ENST00000639481 SETD1AO15047 1707 aaKnown RBP28.95■■■□□ 2.23
CROCCP2-205ENST00000639481 PHLPP1O60346 1717 aa28.94■■■□□ 2.22
CROCCP2-205ENST00000639481 FOXD1Q16676 465 aa28.94■■■□□ 2.22
CROCCP2-205ENST00000639481 PPLO60437 1756 aa28.93■■■□□ 2.22
CROCCP2-205ENST00000639481 C14orf37Q86TY3 774 aa28.9■■■□□ 2.22
CROCCP2-205ENST00000639481 C19orf44Q9H6X5 657 aa28.9■■■□□ 2.22
CROCCP2-205ENST00000639481 COL16A1Q07092 1604 aaPredicted RBP28.87■■■□□ 2.21
CROCCP2-205ENST00000639481 PHF23Q9BUL5 403 aaPredicted RBP28.87■■■□□ 2.21
CROCCP2-205ENST00000639481 CADPS2Q86UW7 1296 aa28.85■■■□□ 2.21
CROCCP2-205ENST00000639481 NALCNQ8IZF0 1738 aa28.85■■■□□ 2.21
CROCCP2-205ENST00000639481 RGS17Q9UGC6 210 aaPredicted RBP28.83■■■□□ 2.21
CROCCP2-205ENST00000639481 ATF3P18847 181 aa28.82■■■□□ 2.2
CROCCP2-205ENST00000639481 MPHOSPH9Q99550 1183 aa28.82■■■□□ 2.2
CROCCP2-205ENST00000639481 DCCP43146 1447 aa28.82■■■□□ 2.2
CROCCP2-205ENST00000639481 AHDC1Q5TGY3 1603 aaPredicted RBP28.81■■■□□ 2.2
CROCCP2-205ENST00000639481 IFT172Q9UG01 1749 aa28.8■■■□□ 2.2
CROCCP2-205ENST00000639481 RPGRIP1LQ68CZ1 1315 aa28.8■■■□□ 2.2
CROCCP2-205ENST00000639481 VGFO15240 615 aaPredicted RBP28.8■■■□□ 2.2
CROCCP2-205ENST00000639481 CCDC144AA2RUR9 1427 aa28.77■■■□□ 2.2
CROCCP2-205ENST00000639481 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
CROCCP2-205ENST00000639481 MST1RQ04912 1400 aa28.77■■■□□ 2.2
CROCCP2-205ENST00000639481 SETD5Q9C0A6 1442 aa28.77■■■□□ 2.2
CROCCP2-205ENST00000639481 ADGRL3Q9HAR2 1447 aa28.77■■■□□ 2.2
CROCCP2-205ENST00000639481 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
CROCCP2-205ENST00000639481 JCADQ9P266 1359 aa28.75■■■□□ 2.19
CROCCP2-205ENST00000639481 PTCH1Q13635 1447 aa28.74■■■□□ 2.19
CROCCP2-205ENST00000639481 ROBO2Q9HCK4 1378 aa28.74■■■□□ 2.19
CROCCP2-205ENST00000639481 ASXL1Q8IXJ9 1541 aa28.73■■■□□ 2.19
CROCCP2-205ENST00000639481 PRAG1Q86YV5 1406 aa28.72■■■□□ 2.19
CROCCP2-205ENST00000639481 NHSL1Q5SYE7 1610 aa28.72■■■□□ 2.19
CROCCP2-205ENST00000639481 ADGRF5Q8IZF2 1346 aa28.71■■■□□ 2.19
CROCCP2-205ENST00000639481 SHPRHQ149N8 1683 aa28.7■■■□□ 2.19
CROCCP2-205ENST00000639481 RGL3Q3MIN7 710 aa28.7■■■□□ 2.18
CROCCP2-205ENST00000639481 RAB3GAP2Q9H2M9 1393 aa28.69■■■□□ 2.18
CROCCP2-205ENST00000639481 LRP6O75581 1613 aa28.69■■■□□ 2.18
CROCCP2-205ENST00000639481 POTEAQ6S8J7 498 aa28.64■■■□□ 2.18
CROCCP2-205ENST00000639481 ANKRD30BQ9BXX2 1392 aa28.62■■■□□ 2.17
CROCCP2-205ENST00000639481 C1orf167Q5SNV9 1468 aa28.61■■■□□ 2.17
CROCCP2-205ENST00000639481 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
CROCCP2-205ENST00000639481 DDX17Q92841 729 aaKnown RBP28.6■■■□□ 2.17
CROCCP2-205ENST00000639481 SPATA31A6Q5VVP1 1343 aa28.59■■■□□ 2.17
CROCCP2-205ENST00000639481 ACIN1Q9UKV3 1341 aaKnown RBP28.59■■■□□ 2.17
CROCCP2-205ENST00000639481 LAMC1P11047 1609 aa28.58■■■□□ 2.17
CROCCP2-205ENST00000639481 KNDC1Q76NI1 1749 aa28.57■■■□□ 2.16
CROCCP2-205ENST00000639481 TECPR2O15040 1411 aa28.55■■■□□ 2.16
CROCCP2-205ENST00000639481 TMEM132EQ6IEE7 984 aa28.54■■■□□ 2.16
CROCCP2-205ENST00000639481 NRXN1Q9ULB1 1477 aa28.53■■■□□ 2.16
CROCCP2-205ENST00000639481 CDC42BPGQ6DT37 1551 aa28.53■■■□□ 2.16
CROCCP2-205ENST00000639481 LRPPRCP42704 1394 aaKnown RBP28.52■■■□□ 2.16
CROCCP2-205ENST00000639481 ORAI2Q96SN7 254 aa28.52■■■□□ 2.16
CROCCP2-205ENST00000639481 STK26Q9P289 416 aa28.51■■■□□ 2.15
CROCCP2-205ENST00000639481 WAPLQ7Z5K2 1190 aa28.5■■■□□ 2.15
CROCCP2-205ENST00000639481 MYOM2P54296 1465 aa28.5■■■□□ 2.15
CROCCP2-205ENST00000639481 PLEKHH1Q9ULM0 1364 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms