RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
EFHC1-239ENST00000638140 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
EFHC1-239ENST00000638140 TMEM131LA2VDJ0 1609 aa18.1■□□□□ 0.49
EFHC1-239ENST00000638140 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
EFHC1-239ENST00000638140 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
EFHC1-239ENST00000638140 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.49
EFHC1-239ENST00000638140 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.49
EFHC1-239ENST00000638140 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
EFHC1-239ENST00000638140 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
EFHC1-239ENST00000638140 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
EFHC1-239ENST00000638140 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
EFHC1-239ENST00000638140 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
EFHC1-239ENST00000638140 KCNA6P17658 529 aa18.03■□□□□ 0.48
EFHC1-239ENST00000638140 TBX22Q9Y458 520 aa18.03■□□□□ 0.48
EFHC1-239ENST00000638140 CPS1P31327 1500 aa18.03■□□□□ 0.48
EFHC1-239ENST00000638140 HRCP23327 699 aa18.02■□□□□ 0.48
EFHC1-239ENST00000638140 TRPM2O94759 1503 aa18.02■□□□□ 0.47
EFHC1-239ENST00000638140 CLTCL1P53675 1640 aa18■□□□□ 0.47
EFHC1-239ENST00000638140 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
EFHC1-239ENST00000638140 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
EFHC1-239ENST00000638140 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
EFHC1-239ENST00000638140 TOM1O60784 492 aa17.98■□□□□ 0.47
EFHC1-239ENST00000638140 STRCP1A6NGW2 1772 aa17.98■□□□□ 0.47
EFHC1-239ENST00000638140 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
EFHC1-239ENST00000638140 VGFO15240 615 aaPredicted RBP17.96■□□□□ 0.47
EFHC1-239ENST00000638140 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
EFHC1-239ENST00000638140 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
EFHC1-239ENST00000638140 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
EFHC1-239ENST00000638140 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
EFHC1-239ENST00000638140 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
EFHC1-239ENST00000638140 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
EFHC1-239ENST00000638140 KIF1BO60333 1816 aa17.92■□□□□ 0.46
EFHC1-239ENST00000638140 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
EFHC1-239ENST00000638140 NEXMIFQ5QGS0 1516 aa17.9■□□□□ 0.46
EFHC1-239ENST00000638140 METP08581 1390 aa17.89■□□□□ 0.45
EFHC1-239ENST00000638140 PIK3R4Q99570 1358 aa17.89■□□□□ 0.45
EFHC1-239ENST00000638140 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
EFHC1-239ENST00000638140 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
EFHC1-239ENST00000638140 ADGRF5Q8IZF2 1346 aa17.87■□□□□ 0.45
EFHC1-239ENST00000638140 PTPRUQ92729 1446 aa17.87■□□□□ 0.45
EFHC1-239ENST00000638140 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
EFHC1-239ENST00000638140 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
EFHC1-239ENST00000638140 SETBP1Q9Y6X0 1596 aa17.85■□□□□ 0.45
EFHC1-239ENST00000638140 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
EFHC1-239ENST00000638140 NKTRP30414 1462 aaKnown RBP17.84■□□□□ 0.45
EFHC1-239ENST00000638140 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
EFHC1-239ENST00000638140 HSPA1LP34931 641 aa17.83■□□□□ 0.44
EFHC1-239ENST00000638140 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
EFHC1-239ENST00000638140 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
EFHC1-239ENST00000638140 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
EFHC1-239ENST00000638140 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
EFHC1-239ENST00000638140 MSH6P52701 1360 aa17.81■□□□□ 0.44
EFHC1-239ENST00000638140 C19orf44Q9H6X5 657 aa17.81■□□□□ 0.44
EFHC1-239ENST00000638140 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
EFHC1-239ENST00000638140 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
EFHC1-239ENST00000638140 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
EFHC1-239ENST00000638140 TMEM132EQ6IEE7 984 aa17.78■□□□□ 0.44
EFHC1-239ENST00000638140 PPLO60437 1756 aa17.78■□□□□ 0.44
EFHC1-239ENST00000638140 ATF3P18847 181 aa17.77■□□□□ 0.44
EFHC1-239ENST00000638140 DCAF11Q8TEB1 546 aa17.77■□□□□ 0.44
EFHC1-239ENST00000638140 STK26Q9P289 416 aa17.76■□□□□ 0.43
EFHC1-239ENST00000638140 CFAP70Q5T0N1 1121 aa17.75■□□□□ 0.43
EFHC1-239ENST00000638140 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
EFHC1-239ENST00000638140 C14orf93Q9H972 538 aaKnown RBP17.75■□□□□ 0.43
EFHC1-239ENST00000638140 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
EFHC1-239ENST00000638140 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
EFHC1-239ENST00000638140 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
EFHC1-239ENST00000638140 XRN1Q8IZH2 1706 aaKnown RBP17.71■□□□□ 0.43
EFHC1-239ENST00000638140 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
EFHC1-239ENST00000638140 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
EFHC1-239ENST00000638140 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
EFHC1-239ENST00000638140 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
EFHC1-239ENST00000638140 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
EFHC1-239ENST00000638140 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
EFHC1-239ENST00000638140 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
EFHC1-239ENST00000638140 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
EFHC1-239ENST00000638140 MYOM2P54296 1465 aa17.67■□□□□ 0.42
EFHC1-239ENST00000638140 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
EFHC1-239ENST00000638140 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
EFHC1-239ENST00000638140 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
EFHC1-239ENST00000638140 PTCH1Q13635 1447 aa17.65■□□□□ 0.42
EFHC1-239ENST00000638140 ADGRL3Q9HAR2 1447 aa17.64■□□□□ 0.42
EFHC1-239ENST00000638140 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
EFHC1-239ENST00000638140 DCCP43146 1447 aa17.64■□□□□ 0.41
EFHC1-239ENST00000638140 YTHDC2Q9H6S0 1430 aaKnown RBP17.64■□□□□ 0.41
EFHC1-239ENST00000638140 SIRT1Q96EB6 747 aa17.63■□□□□ 0.41
EFHC1-239ENST00000638140 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
EFHC1-239ENST00000638140 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
EFHC1-239ENST00000638140 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
EFHC1-239ENST00000638140 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
EFHC1-239ENST00000638140 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
EFHC1-239ENST00000638140 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
EFHC1-239ENST00000638140 TRAK1Q9UPV9 953 aa17.61■□□□□ 0.41
EFHC1-239ENST00000638140 TECPR2O15040 1411 aa17.61■□□□□ 0.41
EFHC1-239ENST00000638140 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
EFHC1-239ENST00000638140 MST1RQ04912 1400 aa17.6■□□□□ 0.41
EFHC1-239ENST00000638140 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
EFHC1-239ENST00000638140 ORAI2Q96SN7 254 aa17.59■□□□□ 0.41
EFHC1-239ENST00000638140 NUTM2FA1L443 756 aa17.58■□□□□ 0.4
EFHC1-239ENST00000638140 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms