RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-233	ENST00000638031	CHGA	P10645	457 aa	Known RBP	28.44	■■■□□ 2.14
CHRNA7-233	ENST00000638031	DISP3	Q9P2K9	1392 aa		28.44	■■■□□ 2.14
CHRNA7-233	ENST00000638031	RIMS2	Q9UQ26	1411 aa		28.43	■■■□□ 2.14
CHRNA7-233	ENST00000638031	SCAF1	Q9H7N4	1312 aa	Known RBP	28.42	■■■□□ 2.14
CHRNA7-233	ENST00000638031	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.4	■■■□□ 2.14
CHRNA7-233	ENST00000638031	HSPA1L	P34931	641 aa		28.39	■■■□□ 2.14
CHRNA7-233	ENST00000638031	TRIM52	Q96A61	297 aa		28.37	■■■□□ 2.13
CHRNA7-233	ENST00000638031	PLEKHG1	Q9ULL1	1385 aa		28.37	■■■□□ 2.13
CHRNA7-233	ENST00000638031	XIRP1	Q702N8	1843 aa	Known RBP	28.35	■■■□□ 2.13
CHRNA7-233	ENST00000638031	KCNA6	P17658	529 aa		28.35	■■■□□ 2.13
CHRNA7-233	ENST00000638031	ILDR2	Q71H61	639 aa		28.34	■■■□□ 2.13
CHRNA7-233	ENST00000638031	BCAN	Q96GW7	911 aa		28.33	■■■□□ 2.13
CHRNA7-233	ENST00000638031	SPHKAP	Q2M3C7	1700 aa		28.32	■■■□□ 2.12
CHRNA7-233	ENST00000638031	HDGF	P51858	240 aa	Known RBP	28.32	■■■□□ 2.12
CHRNA7-233	ENST00000638031	PPP1R15A	O75807	674 aa	Predicted RBP	28.31	■■■□□ 2.12
CHRNA7-233	ENST00000638031	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.31	■■■□□ 2.12
CHRNA7-233	ENST00000638031	RBM33	Q96EV2	1170 aa	Known RBP	28.31	■■■□□ 2.12
CHRNA7-233	ENST00000638031	ADAMTS13	Q76LX8	1427 aa		28.29	■■■□□ 2.12
CHRNA7-233	ENST00000638031	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.28	■■■□□ 2.12
CHRNA7-233	ENST00000638031	TBX22	Q9Y458	520 aa		28.28	■■■□□ 2.12
CHRNA7-233	ENST00000638031	TMEM94	Q12767	1356 aa		28.26	■■■□□ 2.12
CHRNA7-233	ENST00000638031	CLTCL1	P53675	1640 aa		28.26	■■■□□ 2.11
CHRNA7-233	ENST00000638031	TRPM2	O94759	1503 aa		28.26	■■■□□ 2.11
CHRNA7-233	ENST00000638031	FOXD1	Q16676	465 aa		28.25	■■■□□ 2.11
CHRNA7-233	ENST00000638031	PROSER2	Q86WR7	435 aa	Predicted RBP	28.24	■■■□□ 2.11
CHRNA7-233	ENST00000638031	NWD1	Q149M9	1564 aa		28.23	■■■□□ 2.11
CHRNA7-233	ENST00000638031	ZNF326	Q5BKZ1	582 aa	Known RBP	28.2	■■■□□ 2.1
CHRNA7-233	ENST00000638031	CHD2	O14647	1828 aa	Known RBP	28.18	■■■□□ 2.1
CHRNA7-233	ENST00000638031	NKTR	P30414	1462 aa	Known RBP	28.17	■■■□□ 2.1
CHRNA7-233	ENST00000638031	MPHOSPH9	Q99550	1183 aa		28.17	■■■□□ 2.1
CHRNA7-233	ENST00000638031	PTPRU	Q92729	1446 aa		28.16	■■■□□ 2.1
CHRNA7-233	ENST00000638031	NRXN3	Q9Y4C0	1643 aa		28.14	■■■□□ 2.1
CHRNA7-233	ENST00000638031	NEXMIF	Q5QGS0	1516 aa		28.14	■■■□□ 2.1
CHRNA7-233	ENST00000638031	SETD5	Q9C0A6	1442 aa		28.13	■■■□□ 2.09
CHRNA7-233	ENST00000638031	FAM135B	Q49AJ0	1406 aa		28.11	■■■□□ 2.09
CHRNA7-233	ENST00000638031	DIP2A	Q14689	1571 aa		28.11	■■■□□ 2.09
CHRNA7-233	ENST00000638031	MED1	Q15648	1581 aa	Predicted RBP	28.11	■■■□□ 2.09
CHRNA7-233	ENST00000638031	PIK3R4	Q99570	1358 aa		28.11	■■■□□ 2.09
CHRNA7-233	ENST00000638031	AMOTL2	Q9Y2J4	779 aa		28.1	■■■□□ 2.09
CHRNA7-233	ENST00000638031	SETBP1	Q9Y6X0	1596 aa		28.1	■■■□□ 2.09
CHRNA7-233	ENST00000638031	MET	P08581	1390 aa		28.09	■■■□□ 2.09
CHRNA7-233	ENST00000638031	KIF1B	O60333	1816 aa		28.08	■■■□□ 2.09
CHRNA7-233	ENST00000638031	SOCS7	O14512	581 aa		28.07	■■■□□ 2.08
CHRNA7-233	ENST00000638031	RAB3GAP2	Q9H2M9	1393 aa		28.05	■■■□□ 2.08
CHRNA7-233	ENST00000638031	MSH6	P52701	1360 aa		28.04	■■■□□ 2.08
CHRNA7-233	ENST00000638031	RPGRIP1L	Q68CZ1	1315 aa		28.01	■■■□□ 2.07
CHRNA7-233	ENST00000638031	SLAIN2	Q9P270	581 aa		28.01	■■■□□ 2.07
CHRNA7-233	ENST00000638031	NCOA3	Q9Y6Q9	1424 aa		28.01	■■■□□ 2.07
CHRNA7-233	ENST00000638031	ROBO1	Q9Y6N7	1651 aa		28	■■■□□ 2.07
CHRNA7-233	ENST00000638031	VGF	O15240	615 aa	Predicted RBP	28	■■■□□ 2.07
CHRNA7-233	ENST00000638031	SPATA31E1	Q6ZUB1	1445 aa		27.99	■■■□□ 2.07
CHRNA7-233	ENST00000638031	CCDC144A	A2RUR9	1427 aa		27.98	■■■□□ 2.07
CHRNA7-233	ENST00000638031	RGL3	Q3MIN7	710 aa		27.97	■■■□□ 2.07
CHRNA7-233	ENST00000638031	XRN1	Q8IZH2	1706 aa	Known RBP	27.97	■■■□□ 2.07
CHRNA7-233	ENST00000638031	C19orf44	Q9H6X5	657 aa		27.96	■■■□□ 2.07
CHRNA7-233	ENST00000638031	ADGRF5	Q8IZF2	1346 aa		27.94	■■■□□ 2.06
CHRNA7-233	ENST00000638031	ACIN1	Q9UKV3	1341 aa	Known RBP	27.93	■■■□□ 2.06
CHRNA7-233	ENST00000638031	C14orf37	Q86TY3	774 aa		27.93	■■■□□ 2.06
CHRNA7-233	ENST00000638031	PPL	O60437	1756 aa		27.93	■■■□□ 2.06
CHRNA7-233	ENST00000638031	SETD1A	O15047	1707 aa	Known RBP	27.91	■■■□□ 2.06
CHRNA7-233	ENST00000638031	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.91	■■■□□ 2.06
CHRNA7-233	ENST00000638031	PHF23	Q9BUL5	403 aa	Predicted RBP	27.89	■■■□□ 2.06
CHRNA7-233	ENST00000638031	CADPS2	Q86UW7	1296 aa		27.87	■■■□□ 2.05
CHRNA7-233	ENST00000638031	ATF3	P18847	181 aa		27.86	■■■□□ 2.05
CHRNA7-233	ENST00000638031	HRC	P23327	699 aa		27.86	■■■□□ 2.05
CHRNA7-233	ENST00000638031	ROBO2	Q9HCK4	1378 aa		27.85	■■■□□ 2.05
CHRNA7-233	ENST00000638031	RGS17	Q9UGC6	210 aa	Predicted RBP	27.84	■■■□□ 2.05
CHRNA7-233	ENST00000638031	PHLPP1	O60346	1717 aa		27.83	■■■□□ 2.05
CHRNA7-233	ENST00000638031	ANKRD30B	Q9BXX2	1392 aa		27.83	■■■□□ 2.05
CHRNA7-233	ENST00000638031	IFT172	Q9UG01	1749 aa		27.81	■■■□□ 2.04
CHRNA7-233	ENST00000638031	DCC	P43146	1447 aa		27.78	■■■□□ 2.04
CHRNA7-233	ENST00000638031	PRAG1	Q86YV5	1406 aa		27.78	■■■□□ 2.04
CHRNA7-233	ENST00000638031	ADGRL3	Q9HAR2	1447 aa		27.78	■■■□□ 2.04
CHRNA7-233	ENST00000638031	BRINP3	Q76B58	766 aa		27.78	■■■□□ 2.04
CHRNA7-233	ENST00000638031	MST1R	Q04912	1400 aa		27.77	■■■□□ 2.04
CHRNA7-233	ENST00000638031	PTCH1	Q13635	1447 aa		27.77	■■■□□ 2.04
CHRNA7-233	ENST00000638031	TMEM132E	Q6IEE7	984 aa		27.77	■■■□□ 2.04
CHRNA7-233	ENST00000638031	COL16A1	Q07092	1604 aa	Predicted RBP	27.77	■■■□□ 2.04
CHRNA7-233	ENST00000638031	PIK3C2G	O75747	1445 aa		27.76	■■■□□ 2.04
CHRNA7-233	ENST00000638031	JCAD	Q9P266	1359 aa		27.74	■■■□□ 2.03
CHRNA7-233	ENST00000638031	ASXL1	Q8IXJ9	1541 aa		27.74	■■■□□ 2.03
CHRNA7-233	ENST00000638031	NALCN	Q8IZF0	1738 aa		27.74	■■■□□ 2.03
CHRNA7-233	ENST00000638031	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.72	■■■□□ 2.03
CHRNA7-233	ENST00000638031	NRXN1	Q9ULB1	1477 aa		27.71	■■■□□ 2.03
CHRNA7-233	ENST00000638031	C14orf93	Q9H972	538 aa	Known RBP	27.71	■■■□□ 2.03
CHRNA7-233	ENST00000638031	STK26	Q9P289	416 aa		27.71	■■■□□ 2.03
CHRNA7-233	ENST00000638031	CFAP70	Q5T0N1	1121 aa		27.69	■■■□□ 2.02
CHRNA7-233	ENST00000638031	WAPL	Q7Z5K2	1190 aa		27.69	■■■□□ 2.02
CHRNA7-233	ENST00000638031	LRPPRC	P42704	1394 aa	Known RBP	27.68	■■■□□ 2.02
CHRNA7-233	ENST00000638031	DDX17	Q92841	729 aa	Known RBP	27.67	■■■□□ 2.02
CHRNA7-233	ENST00000638031	ABCC11	Q96J66	1382 aa		27.67	■■■□□ 2.02
CHRNA7-233	ENST00000638031	POTEA	Q6S8J7	498 aa		27.66	■■■□□ 2.02
CHRNA7-233	ENST00000638031	TECPR2	O15040	1411 aa		27.66	■■■□□ 2.02
CHRNA7-233	ENST00000638031	MYOM2	P54296	1465 aa		27.65	■■■□□ 2.02
CHRNA7-233	ENST00000638031	PLEKHH1	Q9ULM0	1364 aa		27.65	■■■□□ 2.02
CHRNA7-233	ENST00000638031	C1orf167	Q5SNV9	1468 aa		27.64	■■■□□ 2.02
CHRNA7-233	ENST00000638031	ORAI2	Q96SN7	254 aa		27.63	■■■□□ 2.01
CHRNA7-233	ENST00000638031	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.63	■■■□□ 2.01
CHRNA7-233	ENST00000638031	SPATA31A6	Q5VVP1	1343 aa		27.62	■■■□□ 2.01
CHRNA7-233	ENST00000638031	DHX57	Q6P158	1386 aa	Known RBP	27.61	■■■□□ 2.01

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