RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 CYP4X1Q8N118 509 aa0.53□□□□□ -2.32
SYNGAP1-225ENST00000637911 CNTNAP3BQ96NU0 1288 aa0.53□□□□□ -2.32
SYNGAP1-225ENST00000637911 TMUB1Q9BVT8 246 aa0.53□□□□□ -2.32
SYNGAP1-225ENST00000637911 CNTNAP3Q9BZ76 1288 aa0.53□□□□□ -2.32
SYNGAP1-225ENST00000637911 TMPRSS5Q9H3S3 457 aa0.53□□□□□ -2.32
SYNGAP1-225ENST00000637911 SOWAHBA6NEL2 793 aa0.52□□□□□ -2.33
SYNGAP1-225ENST00000637911 PPP4R3BQ5MIZ7 849 aa0.52□□□□□ -2.33
SYNGAP1-225ENST00000637911 IL21Q9HBE4 155 aa0.52□□□□□ -2.33
SYNGAP1-225ENST00000637911 ENAMQ9NRM1 1142 aa0.52□□□□□ -2.33
SYNGAP1-225ENST00000637911 HMCN1Q96RW7 5635 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 TTC24A2A3L6 582 aaPredicted RBP0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 KRTAP5-8O75690 187 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 ARHGEF15O94989 841 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 C8AP07357 584 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 DOC2BQ14184 412 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 LMOD2Q6P5Q4 547 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 SPOCD1Q6ZMY3 1216 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 ZDHHC13Q8IUH4 622 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 NTN5Q8WTR8 489 aaPredicted RBP0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 CNTNAP5Q8WYK1 1306 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 SLC4A5Q9BY07 1137 aa0.51□□□□□ -2.33
SYNGAP1-225ENST00000637911 KRBA1A5PL33 1030 aa0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 AMHP03971 560 aa0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 MKRN4PQ13434 485 aaPredicted RBP0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 TJAP1Q5JTD0 557 aa0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 WHAMMQ8TF30 809 aa0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 TSR3Q9UJK0 312 aaKnown RBP0.5□□□□□ -2.33
SYNGAP1-225ENST00000637911 ELNP15502 786 aa0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 ATXN1P54253 815 aaKnown RBP0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 ALYREFQ86V81 257 aaKnown RBP0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 MTRQ99707 1265 aa0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 KRTAP4-3Q9BYR4 195 aa0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 ACSS3Q9H6R3 686 aa0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 HPS5Q9UPZ3 1129 aa0.49□□□□□ -2.33
SYNGAP1-225ENST00000637911 KDM4FA0A1W2PPD8 638 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 DBX1A6NMT0 343 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 KRTAP10-9P60411 292 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 PPP4CP60510 307 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 OGFOD2Q6N063 350 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 LIAT1Q6ZQX7 453 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 RASEFQ8IZ41 740 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 NEDD1Q8NHV4 660 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 NKX2-3Q8TAU0 364 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 ZNF516Q92618 1163 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 TOR4AQ9NXH8 423 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 CDKN2AIPQ9NXV6 580 aaPredicted RBP0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 PCDHGA4Q9Y5G9 962 aa0.48□□□□□ -2.33
SYNGAP1-225ENST00000637911 C1QTNF9BB2RNN3 333 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 RNF223E7ERA6 249 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 KRT76Q01546 638 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 PRSS36Q5K4E3 855 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 TMEM92Q6UXU6 159 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 LRCH3Q96II8 777 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 ZFRQ96KR1 1074 aaKnown RBP0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 COL25A1Q9BXS0 654 aaPredicted RBP0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 PCMTD2Q9NV79 361 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 PKD2L1Q9P0L9 805 aa0.47□□□□□ -2.33
SYNGAP1-225ENST00000637911 FCHSD2O94868 740 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 SMPD1P17405 629 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 PTPREP23469 700 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 GATA4P43694 442 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 RSPO4Q2I0M5 234 aaPredicted RBP0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 KRTAP19-4Q3LI73 84 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 LAPTM4BQ86VI4 370 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 POU5F2Q8N7G0 328 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 BORCS6Q96GS4 357 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 CRELD1Q96HD1 420 aa0.46□□□□□ -2.34
SYNGAP1-225ENST00000637911 DYRK3O43781 588 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 PPFIA3O75145 1194 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 ADAMTS2O95450 1211 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 CELA2BP08218 269 aaPredicted RBP0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 GRIN2CQ14957 1233 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 PKN1Q16512 942 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 LYPD4Q6UWN0 246 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 ILDR1Q86SU0 546 aaPredicted RBP0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 CD163Q86VB7 1156 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 ANKLE1Q8NAG6 615 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZBED2Q9BTP6 218 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 RABGEF1Q9UJ41 708 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 PCDHB8Q9UN66 801 aa0.45□□□□□ -2.34
SYNGAP1-225ENST00000637911 CD2BP2O95400 341 aaKnown RBP0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 BMP1P13497 986 aa0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 CTSWP56202 376 aa0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 BHLHA9Q7RTU4 235 aa0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 MICALL2Q8IY33 904 aa0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 GPR161Q8N6U8 529 aaKnown RBP0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 CIZ1Q9ULV3 898 aaPredicted RBP0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 OBSCNQ5VST9 7968 aa0.44□□□□□ -2.34
SYNGAP1-225ENST00000637911 PPEF1O14829 653 aaPredicted RBP0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 MAN1A2O60476 641 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 SLC34A2O95436 690 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 KRTAP10-6P60371 365 aaPredicted RBP0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 COPS2P61201 443 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 HNRNPA0Q13151 305 aaKnown RBP0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 SCARF1Q14162 830 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZNF124Q15973 351 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 RNFT1Q5M7Z0 435 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 NKAPLQ5M9Q1 402 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 TRIM46Q7Z4K8 759 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 GGNQ86UU5 652 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms