RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 POTEDQ86YR6 584 aa2.68□□□□□ -1.98
SYNGAP1-225ENST00000637911 AEBP2Q6ZN18 517 aaPredicted RBP2.04□□□□□ -2.08
SYNGAP1-225ENST00000637911 POTEHQ6S545 545 aa2.02□□□□□ -2.09
SYNGAP1-225ENST00000637911 CHIC1Q5VXU3 224 aa1.99□□□□□ -2.09
SYNGAP1-225ENST00000637911 CACNB1Q02641 598 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-225ENST00000637911 PLSCR2Q9NRY7 297 aa1.96□□□□□ -2.1
SYNGAP1-225ENST00000637911 MSH5O43196 834 aa1.92□□□□□ -2.1
SYNGAP1-225ENST00000637911 SENP3Q9H4L4 574 aaPredicted RBP1.9□□□□□ -2.11
SYNGAP1-225ENST00000637911 FOXD1Q16676 465 aa1.79□□□□□ -2.12
SYNGAP1-225ENST00000637911 PHF23Q9BUL5 403 aaPredicted RBP1.79□□□□□ -2.12
SYNGAP1-225ENST00000637911 SP7Q8TDD2 431 aaPredicted RBP1.66□□□□□ -2.14
SYNGAP1-225ENST00000637911 PIAS4Q8N2W9 510 aaPredicted RBP1.59□□□□□ -2.15
SYNGAP1-225ENST00000637911 LHX8Q68G74 356 aa1.57□□□□□ -2.16
SYNGAP1-225ENST00000637911 RNF39Q9H2S5 420 aa1.54□□□□□ -2.16
SYNGAP1-225ENST00000637911 C1QBPQ07021 282 aaKnown RBP1.53□□□□□ -2.16
SYNGAP1-225ENST00000637911 PCDH10Q9P2E7 1040 aa1.53□□□□□ -2.16
SYNGAP1-225ENST00000637911 POTEMA6NI47 508 aa1.5□□□□□ -2.17
SYNGAP1-225ENST00000637911 POTEGQ6S5H5 508 aa1.48□□□□□ -2.17
SYNGAP1-225ENST00000637911 DCAF8L1A6NGE4 600 aa1.46□□□□□ -2.18
SYNGAP1-225ENST00000637911 HAX1O00165 279 aa1.46□□□□□ -2.18
SYNGAP1-225ENST00000637911 CHRDL2Q6WN34 429 aa1.44□□□□□ -2.18
SYNGAP1-225ENST00000637911 DMRT2Q9Y5R5 561 aa1.4□□□□□ -2.19
SYNGAP1-225ENST00000637911 CDAN1Q8IWY9 1227 aa1.33□□□□□ -2.2
SYNGAP1-225ENST00000637911 MMRN1Q13201 1228 aa1.32□□□□□ -2.2
SYNGAP1-225ENST00000637911 EVX2Q03828 476 aa1.31□□□□□ -2.2
SYNGAP1-225ENST00000637911 MAPK8IP2Q13387 824 aaPredicted RBP1.3□□□□□ -2.2
SYNGAP1-225ENST00000637911 RBM42Q9BTD8 480 aaKnown RBP1.3□□□□□ -2.2
SYNGAP1-225ENST00000637911 FAM163AQ96GL9 167 aaPredicted RBP1.29□□□□□ -2.2
SYNGAP1-225ENST00000637911 GABBR2O75899 941 aa1.28□□□□□ -2.2
SYNGAP1-225ENST00000637911 DSG3P32926 999 aa1.28□□□□□ -2.2
SYNGAP1-225ENST00000637911 OTUD5Q96G74 571 aa1.28□□□□□ -2.2
SYNGAP1-225ENST00000637911 ADRA2BP18089 450 aa1.27□□□□□ -2.21
SYNGAP1-225ENST00000637911 PIP4P2Q8N4L2 257 aa1.27□□□□□ -2.21
SYNGAP1-225ENST00000637911 LOC100996750A0A140TA64 210 aa1.26□□□□□ -2.21
SYNGAP1-225ENST00000637911 SPNS2Q8IVW8 549 aa1.26□□□□□ -2.21
SYNGAP1-225ENST00000637911 KRTAP4-6Q9BYQ5 205 aa1.26□□□□□ -2.21
SYNGAP1-225ENST00000637911 PPP6R1Q9UPN7 881 aa1.26□□□□□ -2.21
SYNGAP1-225ENST00000637911 SCAF1Q9H7N4 1312 aaKnown RBP1.24□□□□□ -2.21
SYNGAP1-225ENST00000637911 CAPN15O75808 1086 aa1.24□□□□□ -2.21
SYNGAP1-225ENST00000637911 DCBLD2Q96PD2 775 aa1.21□□□□□ -2.22
SYNGAP1-225ENST00000637911 POTEIP0CG38 1075 aa1.2□□□□□ -2.22
SYNGAP1-225ENST00000637911 LCE2DQ5TA82 110 aaPredicted RBP1.2□□□□□ -2.22
SYNGAP1-225ENST00000637911 DNAJC5BQ9UF47 199 aa1.19□□□□□ -2.22
SYNGAP1-225ENST00000637911 FXR2P51116 673 aaKnown RBP eCLIP1.18□□□□□ -2.22
SYNGAP1-225ENST00000637911 MAMSTRQ6ZN01 415 aa1.17□□□□□ -2.22
SYNGAP1-225ENST00000637911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.17□□□□□ -2.22
SYNGAP1-225ENST00000637911 C19orf67A6NJJ6 358 aa1.16□□□□□ -2.22
SYNGAP1-225ENST00000637911 POTEB2H3BUK9 544 aa1.16□□□□□ -2.22
SYNGAP1-225ENST00000637911 SPINK5Q9NQ38 1064 aaPredicted RBP1.15□□□□□ -2.23
SYNGAP1-225ENST00000637911 ABCB7O75027 752 aa1.14□□□□□ -2.23
SYNGAP1-225ENST00000637911 XP32Q5T750 250 aa1.14□□□□□ -2.23
SYNGAP1-225ENST00000637911 SCUBE2Q9NQ36 999 aa1.14□□□□□ -2.23
SYNGAP1-225ENST00000637911 HOXD11P31277 338 aaPredicted RBP1.13□□□□□ -2.23
SYNGAP1-225ENST00000637911 CLCN6P51797 869 aa1.13□□□□□ -2.23
SYNGAP1-225ENST00000637911 AKT1S1Q96B36 256 aa1.13□□□□□ -2.23
SYNGAP1-225ENST00000637911 REM2Q8IYK8 340 aaPredicted RBP1.12□□□□□ -2.23
SYNGAP1-225ENST00000637911 IRX2Q9BZI1 471 aaPredicted RBP1.11□□□□□ -2.23
SYNGAP1-225ENST00000637911 SUZ12Q15022 739 aaKnown RBP1.1□□□□□ -2.23
SYNGAP1-225ENST00000637911 PITPNM1O00562 1244 aa1.09□□□□□ -2.23
SYNGAP1-225ENST00000637911 PRKAR2AP13861 404 aaKnown RBP1.09□□□□□ -2.23
SYNGAP1-225ENST00000637911 TRHP20396 242 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-225ENST00000637911 KRTAP1-3Q8IUG1 177 aa1.09□□□□□ -2.23
SYNGAP1-225ENST00000637911 RNF166Q96A37 237 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-225ENST00000637911 BTBD11A6QL63 1104 aa1.08□□□□□ -2.24
SYNGAP1-225ENST00000637911 ST18O60284 1047 aa1.08□□□□□ -2.24
SYNGAP1-225ENST00000637911 ANO8Q9HCE9 1232 aaPredicted RBP1.08□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.06□□□□□ -2.24
SYNGAP1-225ENST00000637911 Q6ZNB5 142 aa1.06□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP9-8Q9BYQ0 159 aa1.06□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP4-8Q9BYQ9 185 aa1.06□□□□□ -2.24
SYNGAP1-225ENST00000637911 ZNF219Q9P2Y4 722 aaPredicted RBP1.06□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP9-6A0A140TA67 174 aa1.05□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP9-2Q9BYQ4 174 aa1.05□□□□□ -2.24
SYNGAP1-225ENST00000637911 PLA2G2EQ9NZK7 142 aa1.05□□□□□ -2.24
SYNGAP1-225ENST00000637911 POTEJP0CG39 1038 aa1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 CD44P16070 742 aaKnown RBP1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP5-3Q6L8H2 238 aa1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 PSMG3-AS1Q96PY0 264 aa1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 TMEM121BQ9BXQ6 578 aaPredicted RBP1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP17-1Q9BYP8 105 aa1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 METRNQ9UJH8 293 aa1.04□□□□□ -2.24
SYNGAP1-225ENST00000637911 C7P10643 843 aa1.03□□□□□ -2.24
SYNGAP1-225ENST00000637911 APLP2Q06481 763 aa1.03□□□□□ -2.24
SYNGAP1-225ENST00000637911 LCE3BQ5TA77 95 aa1.03□□□□□ -2.24
SYNGAP1-225ENST00000637911 MYT1LQ9UL68 1186 aa1.03□□□□□ -2.24
SYNGAP1-225ENST00000637911 KRTAP4-8A0A0G2JLE6 195 aa1.02□□□□□ -2.25
SYNGAP1-225ENST00000637911 SLC39A7Q92504 469 aa1.02□□□□□ -2.25
SYNGAP1-225ENST00000637911 MARVELD3Q96A59 401 aa1.02□□□□□ -2.25
SYNGAP1-225ENST00000637911 ZNF775Q96BV0 537 aaPredicted RBP1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 KRTAP4-7Q9BYR0 210 aa1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 KRTAP3-3Q9BYR6 98 aa1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 KRTAP3-2Q9BYR7 98 aa1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 RNF216Q9NWF9 866 aaPredicted RBP1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 STK17AQ9UEE5 414 aa1.01□□□□□ -2.25
SYNGAP1-225ENST00000637911 PLPPR3Q6T4P5 718 aa1□□□□□ -2.25
SYNGAP1-225ENST00000637911 U3KPZ7 1027 aaPredicted RBP1□□□□□ -2.25
SYNGAP1-225ENST00000637911 SNPHO15079 494 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 RGS20O76081 388 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 EMP3P54852 163 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 ZNF787Q6DD87 383 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms