RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
CLN8-214ENST00000637594 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLN8-214ENST00000637594 ADGRB3O60242 1522 aa13.62□□□□□ -0.23
CLN8-214ENST00000637594 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
CLN8-214ENST00000637594 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
CLN8-214ENST00000637594 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
CLN8-214ENST00000637594 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CLN8-214ENST00000637594 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
CLN8-214ENST00000637594 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
CLN8-214ENST00000637594 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
CLN8-214ENST00000637594 BCANQ96GW7 911 aa13.59□□□□□ -0.23
CLN8-214ENST00000637594 MSH6P52701 1360 aa13.58□□□□□ -0.23
CLN8-214ENST00000637594 RIMS2Q9UQ26 1411 aa13.58□□□□□ -0.24
CLN8-214ENST00000637594 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
CLN8-214ENST00000637594 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
CLN8-214ENST00000637594 PIK3R4Q99570 1358 aa13.56□□□□□ -0.24
CLN8-214ENST00000637594 C19orf44Q9H6X5 657 aa13.55□□□□□ -0.24
CLN8-214ENST00000637594 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
CLN8-214ENST00000637594 ADAMTS13Q76LX8 1427 aa13.54□□□□□ -0.24
CLN8-214ENST00000637594 UNC13BO14795 1591 aa13.54□□□□□ -0.24
CLN8-214ENST00000637594 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
CLN8-214ENST00000637594 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
CLN8-214ENST00000637594 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
CLN8-214ENST00000637594 NUP155O75694 1391 aa13.52□□□□□ -0.25
CLN8-214ENST00000637594 JCADQ9P266 1359 aa13.52□□□□□ -0.25
CLN8-214ENST00000637594 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
CLN8-214ENST00000637594 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
CLN8-214ENST00000637594 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
CLN8-214ENST00000637594 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
CLN8-214ENST00000637594 E9PCH4 1651 aa13.49□□□□□ -0.25
CLN8-214ENST00000637594 IQGAP3Q86VI3 1631 aa13.49□□□□□ -0.25
CLN8-214ENST00000637594 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
CLN8-214ENST00000637594 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
CLN8-214ENST00000637594 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
CLN8-214ENST00000637594 ATF3P18847 181 aa13.48□□□□□ -0.25
CLN8-214ENST00000637594 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
CLN8-214ENST00000637594 PTPRUQ92729 1446 aa13.46□□□□□ -0.26
CLN8-214ENST00000637594 PHLPP1O60346 1717 aa13.44□□□□□ -0.26
CLN8-214ENST00000637594 BRINP3Q76B58 766 aa13.44□□□□□ -0.26
CLN8-214ENST00000637594 TRPM2O94759 1503 aa13.44□□□□□ -0.26
CLN8-214ENST00000637594 COL16A1Q07092 1604 aaPredicted RBP13.43□□□□□ -0.26
CLN8-214ENST00000637594 ITGAEP38570 1179 aa13.43□□□□□ -0.26
CLN8-214ENST00000637594 DCCP43146 1447 aa13.43□□□□□ -0.26
CLN8-214ENST00000637594 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
CLN8-214ENST00000637594 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
CLN8-214ENST00000637594 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
CLN8-214ENST00000637594 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
CLN8-214ENST00000637594 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
CLN8-214ENST00000637594 METP08581 1390 aa13.4□□□□□ -0.26
CLN8-214ENST00000637594 LRP6O75581 1613 aa13.39□□□□□ -0.27
CLN8-214ENST00000637594 SETD5Q9C0A6 1442 aa13.39□□□□□ -0.27
CLN8-214ENST00000637594 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
CLN8-214ENST00000637594 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
CLN8-214ENST00000637594 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
CLN8-214ENST00000637594 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
CLN8-214ENST00000637594 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
CLN8-214ENST00000637594 MST1RQ04912 1400 aa13.37□□□□□ -0.27
CLN8-214ENST00000637594 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
CLN8-214ENST00000637594 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
CLN8-214ENST00000637594 SHPRHQ149N8 1683 aa13.36□□□□□ -0.27
CLN8-214ENST00000637594 RPGRIP1LQ68CZ1 1315 aa13.36□□□□□ -0.27
CLN8-214ENST00000637594 RXRBP28702 533 aa13.35□□□□□ -0.27
CLN8-214ENST00000637594 NAIPQ13075 1403 aa13.35□□□□□ -0.27
CLN8-214ENST00000637594 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
CLN8-214ENST00000637594 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
CLN8-214ENST00000637594 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
CLN8-214ENST00000637594 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
CLN8-214ENST00000637594 UPF1Q92900 1129 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLN8-214ENST00000637594 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
CLN8-214ENST00000637594 CDK12Q9NYV4 1490 aaPredicted RBP13.31□□□□□ -0.28
CLN8-214ENST00000637594 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
CLN8-214ENST00000637594 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
CLN8-214ENST00000637594 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
CLN8-214ENST00000637594 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
CLN8-214ENST00000637594 AFF2P51816 1311 aa13.3□□□□□ -0.28
CLN8-214ENST00000637594 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
CLN8-214ENST00000637594 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
CLN8-214ENST00000637594 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
CLN8-214ENST00000637594 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
CLN8-214ENST00000637594 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
CLN8-214ENST00000637594 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
CLN8-214ENST00000637594 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
CLN8-214ENST00000637594 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
CLN8-214ENST00000637594 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
CLN8-214ENST00000637594 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
CLN8-214ENST00000637594 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
CLN8-214ENST00000637594 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
CLN8-214ENST00000637594 LAMC1P11047 1609 aa13.26□□□□□ -0.29
CLN8-214ENST00000637594 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
CLN8-214ENST00000637594 KIF1BO60333 1816 aa13.25□□□□□ -0.29
CLN8-214ENST00000637594 C8orf37Q96NL8 207 aa13.25□□□□□ -0.29
CLN8-214ENST00000637594 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
CLN8-214ENST00000637594 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
CLN8-214ENST00000637594 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
CLN8-214ENST00000637594 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
CLN8-214ENST00000637594 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
CLN8-214ENST00000637594 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
CLN8-214ENST00000637594 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
CLN8-214ENST00000637594 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
CLN8-214ENST00000637594 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms