RNA–Protein interactions for RNA: ENST00000637443.1

CHRNA4-219, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 120 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-219ENST00000637443 ALKQ9UM73 1620 aa10.33□□□□□ -0.76
CHRNA4-219ENST00000637443 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
CHRNA4-219ENST00000637443 MYO5BQ9ULV0 1848 aa10.33□□□□□ -0.76
CHRNA4-219ENST00000637443 KCNA6P17658 529 aa10.33□□□□□ -0.76
CHRNA4-219ENST00000637443 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
CHRNA4-219ENST00000637443 NWD1Q149M9 1564 aa10.32□□□□□ -0.76
CHRNA4-219ENST00000637443 NKTRP30414 1462 aaKnown RBP10.32□□□□□ -0.76
CHRNA4-219ENST00000637443 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
CHRNA4-219ENST00000637443 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
CHRNA4-219ENST00000637443 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
CHRNA4-219ENST00000637443 ADAMTS13Q76LX8 1427 aa10.3□□□□□ -0.76
CHRNA4-219ENST00000637443 DIP2AQ14689 1571 aa10.3□□□□□ -0.76
CHRNA4-219ENST00000637443 CLTCL1P53675 1640 aa10.29□□□□□ -0.76
CHRNA4-219ENST00000637443 TMEM94Q12767 1356 aa10.29□□□□□ -0.76
CHRNA4-219ENST00000637443 PIP4K2BP78356 416 aa10.29□□□□□ -0.76
CHRNA4-219ENST00000637443 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
CHRNA4-219ENST00000637443 BCANQ96GW7 911 aa10.29□□□□□ -0.76
CHRNA4-219ENST00000637443 XIRP1Q702N8 1843 aaKnown RBP10.28□□□□□ -0.76
CHRNA4-219ENST00000637443 PIK3R4Q99570 1358 aa10.28□□□□□ -0.76
CHRNA4-219ENST00000637443 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
CHRNA4-219ENST00000637443 SCAF1Q9H7N4 1312 aaKnown RBP10.28□□□□□ -0.76
CHRNA4-219ENST00000637443 HSPA1LP34931 641 aa10.27□□□□□ -0.77
CHRNA4-219ENST00000637443 NUTM2DQ5VT03 806 aaPredicted RBP10.27□□□□□ -0.77
CHRNA4-219ENST00000637443 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
CHRNA4-219ENST00000637443 ACIN1Q9UKV3 1341 aaKnown RBP10.27□□□□□ -0.77
CHRNA4-219ENST00000637443 SETBP1Q9Y6X0 1596 aa10.26□□□□□ -0.77
CHRNA4-219ENST00000637443 CHD2O14647 1828 aaKnown RBP10.26□□□□□ -0.77
CHRNA4-219ENST00000637443 NEXMIFQ5QGS0 1516 aa10.26□□□□□ -0.77
CHRNA4-219ENST00000637443 NRXN3Q9Y4C0 1643 aa10.25□□□□□ -0.77
CHRNA4-219ENST00000637443 NCOA3Q9Y6Q9 1424 aa10.25□□□□□ -0.77
CHRNA4-219ENST00000637443 ZNF326Q5BKZ1 582 aaKnown RBP10.25□□□□□ -0.77
CHRNA4-219ENST00000637443 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
CHRNA4-219ENST00000637443 DISP3Q9P2K9 1392 aa10.24□□□□□ -0.77
CHRNA4-219ENST00000637443 FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
CHRNA4-219ENST00000637443 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
CHRNA4-219ENST00000637443 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 MPHOSPH9Q99550 1183 aa10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 RPGRIP1LQ68CZ1 1315 aa10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 KIF1BO60333 1816 aa10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 MSH6P52701 1360 aa10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 PTPRUQ92729 1446 aa10.23□□□□□ -0.77
CHRNA4-219ENST00000637443 CCDC144AA2RUR9 1427 aa10.22□□□□□ -0.77
CHRNA4-219ENST00000637443 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.77
CHRNA4-219ENST00000637443 VGFO15240 615 aaPredicted RBP10.21□□□□□ -0.77
CHRNA4-219ENST00000637443 FOXD1Q16676 465 aa10.21□□□□□ -0.77
CHRNA4-219ENST00000637443 AMOTL2Q9Y2J4 779 aa10.21□□□□□ -0.77
CHRNA4-219ENST00000637443 METP08581 1390 aa10.21□□□□□ -0.78
CHRNA4-219ENST00000637443 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
CHRNA4-219ENST00000637443 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
CHRNA4-219ENST00000637443 PRAG1Q86YV5 1406 aa10.19□□□□□ -0.78
CHRNA4-219ENST00000637443 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
CHRNA4-219ENST00000637443 SLAIN2Q9P270 581 aa10.19□□□□□ -0.78
CHRNA4-219ENST00000637443 DCCP43146 1447 aa10.18□□□□□ -0.78
CHRNA4-219ENST00000637443 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
CHRNA4-219ENST00000637443 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
CHRNA4-219ENST00000637443 PPLO60437 1756 aa10.17□□□□□ -0.78
CHRNA4-219ENST00000637443 HRCP23327 699 aa10.17□□□□□ -0.78
CHRNA4-219ENST00000637443 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
CHRNA4-219ENST00000637443 CADPS2Q86UW7 1296 aa10.17□□□□□ -0.78
CHRNA4-219ENST00000637443 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
CHRNA4-219ENST00000637443 SETD1AO15047 1707 aaKnown RBP10.16□□□□□ -0.78
CHRNA4-219ENST00000637443 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.16□□□□□ -0.78
CHRNA4-219ENST00000637443 ANKRD30BQ9BXX2 1392 aa10.16□□□□□ -0.78
CHRNA4-219ENST00000637443 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
CHRNA4-219ENST00000637443 ATF3P18847 181 aa10.15□□□□□ -0.78
CHRNA4-219ENST00000637443 ILDR2Q71H61 639 aa10.15□□□□□ -0.78
CHRNA4-219ENST00000637443 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
CHRNA4-219ENST00000637443 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
CHRNA4-219ENST00000637443 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
CHRNA4-219ENST00000637443 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
CHRNA4-219ENST00000637443 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
CHRNA4-219ENST00000637443 NRXN1Q9ULB1 1477 aa10.12□□□□□ -0.79
CHRNA4-219ENST00000637443 AHDC1Q5TGY3 1603 aaPredicted RBP10.12□□□□□ -0.79
CHRNA4-219ENST00000637443 MST1RQ04912 1400 aa10.12□□□□□ -0.79
CHRNA4-219ENST00000637443 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
CHRNA4-219ENST00000637443 MYOM2P54296 1465 aa10.11□□□□□ -0.79
CHRNA4-219ENST00000637443 NALCNQ8IZF0 1738 aa10.11□□□□□ -0.79
CHRNA4-219ENST00000637443 TECPR2O15040 1411 aa10.11□□□□□ -0.79
CHRNA4-219ENST00000637443 BRINP3Q76B58 766 aa10.11□□□□□ -0.79
CHRNA4-219ENST00000637443 ASXL1Q8IXJ9 1541 aa10.1□□□□□ -0.79
CHRNA4-219ENST00000637443 LRPPRCP42704 1394 aaKnown RBP10.1□□□□□ -0.79
CHRNA4-219ENST00000637443 JCADQ9P266 1359 aa10.1□□□□□ -0.79
CHRNA4-219ENST00000637443 PHLPP1O60346 1717 aa10.1□□□□□ -0.79
CHRNA4-219ENST00000637443 ABCC11Q96J66 1382 aa10.09□□□□□ -0.79
CHRNA4-219ENST00000637443 SOCS7O14512 581 aa10.08□□□□□ -0.8
CHRNA4-219ENST00000637443 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
CHRNA4-219ENST00000637443 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
CHRNA4-219ENST00000637443 LAMC1P11047 1609 aa10.07□□□□□ -0.8
CHRNA4-219ENST00000637443 CDC42BPGQ6DT37 1551 aa10.07□□□□□ -0.8
CHRNA4-219ENST00000637443 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
CHRNA4-219ENST00000637443 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
CHRNA4-219ENST00000637443 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
CHRNA4-219ENST00000637443 TMEM132EQ6IEE7 984 aa10.06□□□□□ -0.8
CHRNA4-219ENST00000637443 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
CHRNA4-219ENST00000637443 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
CHRNA4-219ENST00000637443 SPATA31A6Q5VVP1 1343 aa10.06□□□□□ -0.8
CHRNA4-219ENST00000637443 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
CHRNA4-219ENST00000637443 STK26Q9P289 416 aa10.05□□□□□ -0.8
CHRNA4-219ENST00000637443 RGS17Q9UGC6 210 aaPredicted RBP10.05□□□□□ -0.8
CHRNA4-219ENST00000637443 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms