RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
CTSD-211ENST00000637387 TMEM131LA2VDJ0 1609 aa21.88■■□□□ 1.09
CTSD-211ENST00000637387 LTBP4Q8N2S1 1624 aa21.87■■□□□ 1.09
CTSD-211ENST00000637387 NLRP1Q9C000 1473 aa21.85■■□□□ 1.09
CTSD-211ENST00000637387 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
CTSD-211ENST00000637387 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
CTSD-211ENST00000637387 MYOM2P54296 1465 aa21.84■■□□□ 1.09
CTSD-211ENST00000637387 LAMC1P11047 1609 aa21.84■■□□□ 1.09
CTSD-211ENST00000637387 KIAA1210Q9ULL0 1709 aa21.82■■□□□ 1.08
CTSD-211ENST00000637387 NEXMIFQ5QGS0 1516 aa21.81■■□□□ 1.08
CTSD-211ENST00000637387 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
CTSD-211ENST00000637387 POLR1AO95602 1720 aaPredicted RBP21.79■■□□□ 1.08
CTSD-211ENST00000637387 THEMISQ8N1K5 641 aaPredicted RBP21.78■■□□□ 1.08
CTSD-211ENST00000637387 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
CTSD-211ENST00000637387 KDM5AP29375 1690 aaKnown RBP21.78■■□□□ 1.08
CTSD-211ENST00000637387 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
CTSD-211ENST00000637387 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
CTSD-211ENST00000637387 IQGAP1P46940 1657 aa21.75■■□□□ 1.07
CTSD-211ENST00000637387 IDI1Q13907 227 aa21.75■■□□□ 1.07
CTSD-211ENST00000637387 ZNF335Q9H4Z2 1342 aaPredicted RBP21.75■■□□□ 1.07
CTSD-211ENST00000637387 UBR1Q8IWV7 1749 aa21.74■■□□□ 1.07
CTSD-211ENST00000637387 SLC52A1Q9NWF4 448 aa21.74■■□□□ 1.07
CTSD-211ENST00000637387 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
CTSD-211ENST00000637387 ANKLE2Q86XL3 938 aa21.74■■□□□ 1.07
CTSD-211ENST00000637387 MED14O60244 1454 aa21.71■■□□□ 1.07
CTSD-211ENST00000637387 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
CTSD-211ENST00000637387 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
CTSD-211ENST00000637387 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
CTSD-211ENST00000637387 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
CTSD-211ENST00000637387 ROCK2O75116 1388 aaKnown RBP21.68■■□□□ 1.06
CTSD-211ENST00000637387 USP47Q96K76 1375 aa21.67■■□□□ 1.06
CTSD-211ENST00000637387 ADGRF5Q8IZF2 1346 aa21.67■■□□□ 1.06
CTSD-211ENST00000637387 CHGAP10645 457 aaKnown RBP21.67■■□□□ 1.06
CTSD-211ENST00000637387 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
CTSD-211ENST00000637387 SETBP1Q9Y6X0 1596 aa21.66■■□□□ 1.06
CTSD-211ENST00000637387 NPHP4O75161 1426 aaPredicted RBP21.66■■□□□ 1.06
CTSD-211ENST00000637387 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
CTSD-211ENST00000637387 ZFYVE9O95405 1425 aa21.65■■□□□ 1.06
CTSD-211ENST00000637387 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
CTSD-211ENST00000637387 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.05
CTSD-211ENST00000637387 SETD1AO15047 1707 aaKnown RBP21.64■■□□□ 1.05
CTSD-211ENST00000637387 ADGRB1O14514 1584 aa21.63■■□□□ 1.05
CTSD-211ENST00000637387 SLIT1O75093 1534 aa21.62■■□□□ 1.05
CTSD-211ENST00000637387 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
CTSD-211ENST00000637387 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
CTSD-211ENST00000637387 NRXN3Q9Y4C0 1643 aa21.6■■□□□ 1.05
CTSD-211ENST00000637387 CPS1P31327 1500 aa21.59■■□□□ 1.05
CTSD-211ENST00000637387 LTKP29376 864 aa21.59■■□□□ 1.05
CTSD-211ENST00000637387 DIEXFQ68CQ4 756 aaKnown RBP21.57■■□□□ 1.04
CTSD-211ENST00000637387 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
CTSD-211ENST00000637387 RIMS2Q9UQ26 1411 aa21.56■■□□□ 1.04
CTSD-211ENST00000637387 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
CTSD-211ENST00000637387 TMEM2Q9UHN6 1383 aa21.55■■□□□ 1.04
CTSD-211ENST00000637387 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
CTSD-211ENST00000637387 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
CTSD-211ENST00000637387 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
CTSD-211ENST00000637387 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
CTSD-211ENST00000637387 UBAP1LF5GYI3 381 aa21.53■■□□□ 1.04
CTSD-211ENST00000637387 NUTM2DQ5VT03 806 aaPredicted RBP21.53■■□□□ 1.04
CTSD-211ENST00000637387 WASHC2AQ641Q2 1341 aa21.52■■□□□ 1.04
CTSD-211ENST00000637387 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
CTSD-211ENST00000637387 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
CTSD-211ENST00000637387 C14orf93Q9H972 538 aaKnown RBP21.51■■□□□ 1.03
CTSD-211ENST00000637387 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
CTSD-211ENST00000637387 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
CTSD-211ENST00000637387 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
CTSD-211ENST00000637387 ST20-MTHFSA0A0A6YYL1 179 aa21.49■■□□□ 1.03
CTSD-211ENST00000637387 QRICH2Q9H0J4 1663 aa21.48■■□□□ 1.03
CTSD-211ENST00000637387 KIF7Q2M1P5 1343 aa21.46■■□□□ 1.03
CTSD-211ENST00000637387 LRRC7Q96NW7 1537 aa21.46■■□□□ 1.03
CTSD-211ENST00000637387 TESK2Q96S53 571 aa21.44■■□□□ 1.02
CTSD-211ENST00000637387 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
CTSD-211ENST00000637387 TOM1O60784 492 aa21.42■■□□□ 1.02
CTSD-211ENST00000637387 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
CTSD-211ENST00000637387 EIF3AQ14152 1382 aaKnown RBP21.41■■□□□ 1.02
CTSD-211ENST00000637387 DISP3Q9P2K9 1392 aa21.4■■□□□ 1.02
CTSD-211ENST00000637387 MYOM1P52179 1685 aa21.4■■□□□ 1.02
CTSD-211ENST00000637387 TMEM132EQ6IEE7 984 aa21.39■■□□□ 1.01
CTSD-211ENST00000637387 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.39■■□□□ 1.01
CTSD-211ENST00000637387 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
CTSD-211ENST00000637387 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
CTSD-211ENST00000637387 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
CTSD-211ENST00000637387 YTHDC2Q9H6S0 1430 aaKnown RBP21.36■■□□□ 1.01
CTSD-211ENST00000637387 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
CTSD-211ENST00000637387 DLC1Q96QB1 1528 aa21.35■■□□□ 1.01
CTSD-211ENST00000637387 KCNA6P17658 529 aa21.35■■□□□ 1.01
CTSD-211ENST00000637387 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
CTSD-211ENST00000637387 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
CTSD-211ENST00000637387 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
CTSD-211ENST00000637387 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
CTSD-211ENST00000637387 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
CTSD-211ENST00000637387 HSPA1LP34931 641 aa21.31■■□□□ 1
CTSD-211ENST00000637387 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
CTSD-211ENST00000637387 METP08581 1390 aa21.31■■□□□ 1
CTSD-211ENST00000637387 TULP4Q9NRJ4 1543 aa21.31■■□□□ 1
CTSD-211ENST00000637387 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
CTSD-211ENST00000637387 MIER1Q8N108 512 aa21.3■■□□□ 1
CTSD-211ENST00000637387 NWD1Q149M9 1564 aa21.3■■□□□ 1
CTSD-211ENST00000637387 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
CTSD-211ENST00000637387 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms