RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
CLN8-210ENST00000636605 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
CLN8-210ENST00000636605 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
CLN8-210ENST00000636605 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
CLN8-210ENST00000636605 FCHSD2O94868 740 aa10.16□□□□□ -0.78
CLN8-210ENST00000636605 APLP1P51693 650 aa10.16□□□□□ -0.78
CLN8-210ENST00000636605 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
CLN8-210ENST00000636605 GPR37O15354 613 aa10.14□□□□□ -0.79
CLN8-210ENST00000636605 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
CLN8-210ENST00000636605 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
CLN8-210ENST00000636605 NECTIN2Q92692 538 aa10.14□□□□□ -0.79
CLN8-210ENST00000636605 MTRQ99707 1265 aa10.14□□□□□ -0.79
CLN8-210ENST00000636605 RNF40O75150 1001 aa10.13□□□□□ -0.79
CLN8-210ENST00000636605 DNAJB2P25686 324 aa10.13□□□□□ -0.79
CLN8-210ENST00000636605 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
CLN8-210ENST00000636605 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
CLN8-210ENST00000636605 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
CLN8-210ENST00000636605 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
CLN8-210ENST00000636605 WIZO95785 1651 aa10.12□□□□□ -0.79
CLN8-210ENST00000636605 HIC1Q14526 733 aa10.1□□□□□ -0.79
CLN8-210ENST00000636605 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
CLN8-210ENST00000636605 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
CLN8-210ENST00000636605 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
CLN8-210ENST00000636605 PXYLP1Q8TE99 480 aa10.07□□□□□ -0.8
CLN8-210ENST00000636605 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
CLN8-210ENST00000636605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
CLN8-210ENST00000636605 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
CLN8-210ENST00000636605 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
CLN8-210ENST00000636605 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
CLN8-210ENST00000636605 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CLN8-210ENST00000636605 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
CLN8-210ENST00000636605 GNPATO15228 680 aa10.04□□□□□ -0.8
CLN8-210ENST00000636605 OATP04181 439 aa10.04□□□□□ -0.8
CLN8-210ENST00000636605 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
CLN8-210ENST00000636605 FECHP22830 423 aa10.03□□□□□ -0.8
CLN8-210ENST00000636605 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
CLN8-210ENST00000636605 CADPSQ9ULU8 1353 aa10.02□□□□□ -0.8
CLN8-210ENST00000636605 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
CLN8-210ENST00000636605 ERCC6Q03468 1493 aa10.02□□□□□ -0.81
CLN8-210ENST00000636605 SLC10A3P09131 477 aa10.01□□□□□ -0.81
CLN8-210ENST00000636605 COPS2P61201 443 aa10.01□□□□□ -0.81
CLN8-210ENST00000636605 PPP1R18Q6NYC8 613 aa10.01□□□□□ -0.81
CLN8-210ENST00000636605 ACTN4O43707 911 aaKnown RBP10□□□□□ -0.81
CLN8-210ENST00000636605 ZPR1O75312 459 aa10□□□□□ -0.81
CLN8-210ENST00000636605 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
CLN8-210ENST00000636605 PCDHB3Q9Y5E6 796 aa10□□□□□ -0.81
CLN8-210ENST00000636605 CFHP08603 1231 aa9.99□□□□□ -0.81
CLN8-210ENST00000636605 BLOC1S3Q6QNY0 202 aa9.98□□□□□ -0.81
CLN8-210ENST00000636605 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
CLN8-210ENST00000636605 KMT5BQ4FZB7 885 aa9.96□□□□□ -0.82
CLN8-210ENST00000636605 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.82
CLN8-210ENST00000636605 NESP48681 1621 aa9.96□□□□□ -0.82
CLN8-210ENST00000636605 CFTRP13569 1480 aa9.95□□□□□ -0.82
CLN8-210ENST00000636605 CCDC88BA6NC98 1476 aa9.94□□□□□ -0.82
CLN8-210ENST00000636605 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
CLN8-210ENST00000636605 PHOX2BQ99453 314 aa9.94□□□□□ -0.82
CLN8-210ENST00000636605 TLL1O43897 1013 aa9.93□□□□□ -0.82
CLN8-210ENST00000636605 TMUB1Q9BVT8 246 aa9.93□□□□□ -0.82
CLN8-210ENST00000636605 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
CLN8-210ENST00000636605 V9GY48 417 aaPredicted RBP9.93□□□□□ -0.82
CLN8-210ENST00000636605 CUX2O14529 1486 aa9.92□□□□□ -0.82
CLN8-210ENST00000636605 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
CLN8-210ENST00000636605 GGCXP38435 758 aa9.9□□□□□ -0.82
CLN8-210ENST00000636605 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
CLN8-210ENST00000636605 FANCD2Q9BXW9 1451 aa9.88□□□□□ -0.83
CLN8-210ENST00000636605 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
CLN8-210ENST00000636605 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
CLN8-210ENST00000636605 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
CLN8-210ENST00000636605 NR1I2O75469 434 aa9.87□□□□□ -0.83
CLN8-210ENST00000636605 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
CLN8-210ENST00000636605 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
CLN8-210ENST00000636605 EMID1Q96A84 441 aaPredicted RBP9.87□□□□□ -0.83
CLN8-210ENST00000636605 ADH1BP00325 375 aa9.86□□□□□ -0.83
CLN8-210ENST00000636605 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
CLN8-210ENST00000636605 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
CLN8-210ENST00000636605 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
CLN8-210ENST00000636605 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
CLN8-210ENST00000636605 S1PR4O95977 384 aa9.84□□□□□ -0.83
CLN8-210ENST00000636605 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
CLN8-210ENST00000636605 DDX11L8A8MPP1 907 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 LCE2BO14633 110 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 GCGRP47871 477 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
CLN8-210ENST00000636605 MORN1Q5T089 497 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 ANKLE1Q8NAG6 615 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
CLN8-210ENST00000636605 IRF6O14896 467 aa9.82□□□□□ -0.84
CLN8-210ENST00000636605 FUT2Q10981 343 aa9.82□□□□□ -0.84
CLN8-210ENST00000636605 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
CLN8-210ENST00000636605 THOC2Q8NI27 1593 aaKnown RBP9.82□□□□□ -0.84
CLN8-210ENST00000636605 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
CLN8-210ENST00000636605 GFRA3O60609 400 aa9.81□□□□□ -0.84
CLN8-210ENST00000636605 Q6ZNB5 142 aa9.81□□□□□ -0.84
CLN8-210ENST00000636605 THAP11Q96EK4 314 aa9.81□□□□□ -0.84
CLN8-210ENST00000636605 WDR62O43379 1518 aa9.81□□□□□ -0.84
CLN8-210ENST00000636605 MINK1Q8N4C8 1332 aaPredicted RBP9.8□□□□□ -0.84
CLN8-210ENST00000636605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLN8-210ENST00000636605 SLC6A16Q9GZN6 736 aa9.79□□□□□ -0.84
CLN8-210ENST00000636605 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms