RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
CLN8-210ENST00000636605 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
CLN8-210ENST00000636605 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
CLN8-210ENST00000636605 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
CLN8-210ENST00000636605 FOXD1Q16676 465 aa20.42■□□□□ 0.86
CLN8-210ENST00000636605 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
CLN8-210ENST00000636605 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
CLN8-210ENST00000636605 ADRA2BP18089 450 aa19.17■□□□□ 0.66
CLN8-210ENST00000636605 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
CLN8-210ENST00000636605 MSH5O43196 834 aa19.02■□□□□ 0.64
CLN8-210ENST00000636605 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
CLN8-210ENST00000636605 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
CLN8-210ENST00000636605 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
CLN8-210ENST00000636605 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
CLN8-210ENST00000636605 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
CLN8-210ENST00000636605 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
CLN8-210ENST00000636605 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
CLN8-210ENST00000636605 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
CLN8-210ENST00000636605 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
CLN8-210ENST00000636605 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
CLN8-210ENST00000636605 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
CLN8-210ENST00000636605 KCNA4P22459 653 aa16.39■□□□□ 0.21
CLN8-210ENST00000636605 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
CLN8-210ENST00000636605 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
CLN8-210ENST00000636605 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
CLN8-210ENST00000636605 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
CLN8-210ENST00000636605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
CLN8-210ENST00000636605 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
CLN8-210ENST00000636605 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CLN8-210ENST00000636605 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
CLN8-210ENST00000636605 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
CLN8-210ENST00000636605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
CLN8-210ENST00000636605 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
CLN8-210ENST00000636605 CAPN15O75808 1086 aa15.34■□□□□ 0.05
CLN8-210ENST00000636605 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
CLN8-210ENST00000636605 DSG3P32926 999 aa15.29■□□□□ 0.04
CLN8-210ENST00000636605 APLP2Q06481 763 aa15.29■□□□□ 0.04
CLN8-210ENST00000636605 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CLN8-210ENST00000636605 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
CLN8-210ENST00000636605 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
CLN8-210ENST00000636605 ZBTB22O15209 634 aa15.14■□□□□ 0.01
CLN8-210ENST00000636605 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
CLN8-210ENST00000636605 ABCB7O75027 752 aa15.02■□□□□ -0
CLN8-210ENST00000636605 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CLN8-210ENST00000636605 POLA2Q14181 598 aa14.82□□□□□ -0.04
CLN8-210ENST00000636605 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
CLN8-210ENST00000636605 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
CLN8-210ENST00000636605 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
CLN8-210ENST00000636605 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
CLN8-210ENST00000636605 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
CLN8-210ENST00000636605 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
CLN8-210ENST00000636605 POTEHQ6S545 545 aa14.29□□□□□ -0.12
CLN8-210ENST00000636605 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
CLN8-210ENST00000636605 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
CLN8-210ENST00000636605 FBLN2P98095 1184 aa14.26□□□□□ -0.13
CLN8-210ENST00000636605 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
CLN8-210ENST00000636605 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
CLN8-210ENST00000636605 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
CLN8-210ENST00000636605 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
CLN8-210ENST00000636605 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
CLN8-210ENST00000636605 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
CLN8-210ENST00000636605 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
CLN8-210ENST00000636605 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
CLN8-210ENST00000636605 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
CLN8-210ENST00000636605 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLN8-210ENST00000636605 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
CLN8-210ENST00000636605 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN8-210ENST00000636605 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
CLN8-210ENST00000636605 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
CLN8-210ENST00000636605 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
CLN8-210ENST00000636605 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
CLN8-210ENST00000636605 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
CLN8-210ENST00000636605 HAX1O00165 279 aa13.48□□□□□ -0.25
CLN8-210ENST00000636605 PROM2Q8N271 834 aa13.48□□□□□ -0.25
CLN8-210ENST00000636605 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
CLN8-210ENST00000636605 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
CLN8-210ENST00000636605 EVX2Q03828 476 aa13.42□□□□□ -0.26
CLN8-210ENST00000636605 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
CLN8-210ENST00000636605 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
CLN8-210ENST00000636605 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
CLN8-210ENST00000636605 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
CLN8-210ENST00000636605 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
CLN8-210ENST00000636605 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
CLN8-210ENST00000636605 FKBP8Q14318 412 aa13.15□□□□□ -0.3
CLN8-210ENST00000636605 GABBR2O75899 941 aa13.11□□□□□ -0.31
CLN8-210ENST00000636605 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CLN8-210ENST00000636605 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLN8-210ENST00000636605 CLCN6P51797 869 aa13.01□□□□□ -0.33
CLN8-210ENST00000636605 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
CLN8-210ENST00000636605 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
CLN8-210ENST00000636605 MIER1Q8N108 512 aa12.92□□□□□ -0.34
CLN8-210ENST00000636605 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
CLN8-210ENST00000636605 POTEIP0CG38 1075 aa12.88□□□□□ -0.35
CLN8-210ENST00000636605 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
CLN8-210ENST00000636605 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
CLN8-210ENST00000636605 GALR2O43603 387 aaPredicted RBP12.84□□□□□ -0.35
CLN8-210ENST00000636605 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
CLN8-210ENST00000636605 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CLN8-210ENST00000636605 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
CLN8-210ENST00000636605 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms