RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 GPS2Q13227 327 aa7.77□□□□□ -1.17
GABRB3-218ENST00000635994 VPS8Q8N3P4 1428 aa7.77□□□□□ -1.17
GABRB3-218ENST00000635994 FAM184AQ8NB25 1140 aa7.77□□□□□ -1.17
GABRB3-218ENST00000635994 ROCK2O75116 1388 aaKnown RBP7.77□□□□□ -1.17
GABRB3-218ENST00000635994 TEX14Q8IWB6 1497 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 BIVM-ERCC5R4GMW8 1640 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 PKD2Q13563 968 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 PLB1Q6P1J6 1458 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 H3BQV1 296 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 TRDNQ13061 729 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 COG3Q96JB2 828 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 RUSC2Q8N2Y8 1516 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
GABRB3-218ENST00000635994 CCER2I3L3R5 266 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 PDE4CQ08493 712 aa7.76□□□□□ -1.17
GABRB3-218ENST00000635994 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
GABRB3-218ENST00000635994 SUPT16HQ9Y5B9 1047 aaKnown RBP7.76□□□□□ -1.17
GABRB3-218ENST00000635994 ERICH2A1L162 156 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 DHX16O60231 1041 aaKnown RBP7.75□□□□□ -1.17
GABRB3-218ENST00000635994 HECW1Q76N89 1606 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 WDHD1O75717 1129 aaPredicted RBP7.75□□□□□ -1.17
GABRB3-218ENST00000635994 PES1O00541 588 aaKnown RBP7.75□□□□□ -1.17
GABRB3-218ENST00000635994 CREBRFQ8IUR6 639 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 ATF3P18847 181 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 ODF2Q5BJF6 829 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 SLC4A10Q6U841 1118 aa7.75□□□□□ -1.17
GABRB3-218ENST00000635994 NUP155O75694 1391 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 TNNT3P45378 269 aaPredicted RBP7.74□□□□□ -1.17
GABRB3-218ENST00000635994 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 HSP90AB4PQ58FF6 505 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 CD109Q6YHK3 1445 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 KLHL34Q8N239 644 aa7.74□□□□□ -1.17
GABRB3-218ENST00000635994 THOC2Q8NI27 1593 aaKnown RBP7.73□□□□□ -1.17
GABRB3-218ENST00000635994 CT47A1Q5JQC4 288 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-218ENST00000635994 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 ZKSCAN1P17029 563 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-218ENST00000635994 MIER1Q8N108 512 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 LTV1Q96GA3 475 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-218ENST00000635994 PLEKHH2Q8IVE3 1493 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 ADAMTS12P58397 1594 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 ROCK1Q13464 1354 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 RAD21O60216 631 aa7.73□□□□□ -1.17
GABRB3-218ENST00000635994 GOLGA6L19H0YKK7 550 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 SAFBQ15424 915 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABRB3-218ENST00000635994 PAF1Q8N7H5 531 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 CPLX1O14810 134 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 EVC2Q86UK5 1308 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 DIAPH3Q9NSV4 1193 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 KIF21BO75037 1637 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 PBRM1Q86U86 1689 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 RRP12Q5JTH9 1297 aaKnown RBP7.72□□□□□ -1.17
GABRB3-218ENST00000635994 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
GABRB3-218ENST00000635994 BECN2A8MW95 431 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 XBP1P17861 261 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 RAPGEF4Q8WZA2 1011 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 STAC3Q96MF2 364 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 SETD5Q9C0A6 1442 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 PSME1Q06323 249 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 CCDC173Q0VFZ6 552 aa7.71□□□□□ -1.17
GABRB3-218ENST00000635994 C9orf78Q9NZ63 289 aaPredicted RBP7.71□□□□□ -1.17
GABRB3-218ENST00000635994 CENPJQ9HC77 1338 aaPredicted RBP7.71□□□□□ -1.18
GABRB3-218ENST00000635994 MFAP1P55081 439 aaKnown RBP7.71□□□□□ -1.18
GABRB3-218ENST00000635994 PCMTD1Q96MG8 357 aaPredicted RBP7.71□□□□□ -1.18
GABRB3-218ENST00000635994 MYO6Q9UM54 1294 aa7.71□□□□□ -1.18
GABRB3-218ENST00000635994 DNAI2Q9GZS0 605 aa7.7□□□□□ -1.18
GABRB3-218ENST00000635994 CGNL1Q0VF96 1302 aa7.7□□□□□ -1.18
GABRB3-218ENST00000635994 SLC3A2P08195 630 aaKnown RBP7.7□□□□□ -1.18
GABRB3-218ENST00000635994 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
GABRB3-218ENST00000635994 CASKIN1Q8WXD9 1431 aa7.7□□□□□ -1.18
GABRB3-218ENST00000635994 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.69□□□□□ -1.18
GABRB3-218ENST00000635994 APPP05067 770 aa7.69□□□□□ -1.18
GABRB3-218ENST00000635994 G3BP1Q13283 466 aaKnown RBP eCLIP7.69□□□□□ -1.18
GABRB3-218ENST00000635994 SYTL4Q96C24 671 aaPredicted RBP7.69□□□□□ -1.18
GABRB3-218ENST00000635994 IFIT2P09913 472 aaKnown RBP7.69□□□□□ -1.18
GABRB3-218ENST00000635994 NLRP13Q86W25 1043 aa7.69□□□□□ -1.18
GABRB3-218ENST00000635994 API5Q9BZZ5 524 aaKnown RBP7.68□□□□□ -1.18
GABRB3-218ENST00000635994 AKNAQ7Z591 1439 aa7.68□□□□□ -1.18
GABRB3-218ENST00000635994 REC8O95072 547 aa7.68□□□□□ -1.18
GABRB3-218ENST00000635994 B4GALNT3Q6L9W6 998 aa7.68□□□□□ -1.18
GABRB3-218ENST00000635994 FYCO1Q9BQS8 1478 aa7.68□□□□□ -1.18
GABRB3-218ENST00000635994 TRIM21P19474 475 aaKnown RBP7.68□□□□□ -1.18
GABRB3-218ENST00000635994 ZRSR2Q15696 482 aaKnown RBP7.68□□□□□ -1.18
GABRB3-218ENST00000635994 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 ACBD3Q9H3P7 528 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 ERC2O15083 957 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 SART3Q15020 963 aaKnown RBP7.67□□□□□ -1.18
GABRB3-218ENST00000635994 SKOR2Q2VWA4 1001 aaPredicted RBP7.67□□□□□ -1.18
GABRB3-218ENST00000635994 NFXL1Q6ZNB6 911 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 DESP17661 470 aa7.67□□□□□ -1.18
GABRB3-218ENST00000635994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.67□□□□□ -1.18
GABRB3-218ENST00000635994 OFD1O75665 1012 aa7.66□□□□□ -1.18
GABRB3-218ENST00000635994 RALYLQ86SE5 291 aaKnown RBP7.66□□□□□ -1.18
GABRB3-218ENST00000635994 ASXL2Q76L83 1435 aa7.66□□□□□ -1.18
GABRB3-218ENST00000635994 GNL3LQ9NVN8 582 aaKnown RBP7.66□□□□□ -1.18
GABRB3-218ENST00000635994 KIF14Q15058 1648 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms