RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 RASSF4Q9H2L5 321 aa7.53□□□□□ -1.2
CHD2-221ENST00000635856 TNNT1P13805 278 aa7.53□□□□□ -1.2
CHD2-221ENST00000635856 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
CHD2-221ENST00000635856 MYRIPQ8NFW9 859 aa7.53□□□□□ -1.2
CHD2-221ENST00000635856 ARID4AP29374 1257 aaPredicted RBP7.52□□□□□ -1.21
CHD2-221ENST00000635856 HSCBQ8IWL3 235 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 CWC15Q9P013 229 aaKnown RBP7.52□□□□□ -1.21
CHD2-221ENST00000635856 WIZO95785 1651 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 ANAPC15P60006 121 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 NOL7Q9UMY1 257 aaKnown RBP7.52□□□□□ -1.21
CHD2-221ENST00000635856 CC2D2AQ9P2K1 1620 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 NCAPGQ9BPX3 1015 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 RSPH14Q9UHP6 348 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
CHD2-221ENST00000635856 HMGXB3Q12766 1538 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 TEX35Q5T0J7 233 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 EGFL6Q8IUX8 553 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 ZBTB12Q9Y330 459 aaPredicted RBP7.51□□□□□ -1.21
CHD2-221ENST00000635856 PPP1R9BQ96SB3 815 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
CHD2-221ENST00000635856 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
CHD2-221ENST00000635856 PAIP2Q9BPZ3 127 aaKnown RBP7.51□□□□□ -1.21
CHD2-221ENST00000635856 CASC1Q6TDU7 716 aa7.5□□□□□ -1.21
CHD2-221ENST00000635856 CCDC91Q7Z6B0 441 aa7.5□□□□□ -1.21
CHD2-221ENST00000635856 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
CHD2-221ENST00000635856 MPHOSPH10O00566 681 aaKnown RBP7.5□□□□□ -1.21
CHD2-221ENST00000635856 CREBRFQ8IUR6 639 aa7.5□□□□□ -1.21
CHD2-221ENST00000635856 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
CHD2-221ENST00000635856 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
CHD2-221ENST00000635856 TOMM22Q9NS69 142 aa7.49□□□□□ -1.21
CHD2-221ENST00000635856 RNF123Q5XPI4 1314 aa7.49□□□□□ -1.21
CHD2-221ENST00000635856 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
CHD2-221ENST00000635856 GPS2Q13227 327 aa7.49□□□□□ -1.21
CHD2-221ENST00000635856 PRKRIP1Q9H875 184 aaPredicted RBP7.49□□□□□ -1.21
CHD2-221ENST00000635856 DDX49Q9Y6V7 483 aaKnown RBP7.49□□□□□ -1.21
CHD2-221ENST00000635856 ABCC8Q09428 1581 aa7.49□□□□□ -1.21
CHD2-221ENST00000635856 KIF1CO43896 1103 aaKnown RBP7.48□□□□□ -1.21
CHD2-221ENST00000635856 LRCH2Q5VUJ6 765 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 CEP164Q9UPV0 1460 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 ATP2B3Q16720 1220 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 ICE2Q659A1 982 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 CLIP1P30622 1438 aa7.48□□□□□ -1.21
CHD2-221ENST00000635856 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD2-221ENST00000635856 KIF27Q86VH2 1401 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 UNC13AQ9UPW8 1703 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 HSP90AB1P08238 724 aaKnown RBP7.47□□□□□ -1.21
CHD2-221ENST00000635856 RAI14Q9P0K7 980 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 U2AF2P26368 475 aaKnown RBP eCLIP7.47□□□□□ -1.215e-7■■■□□ 15.5
CHD2-221ENST00000635856 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 KRT222Q8N1A0 295 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 KNSTRNQ9Y448 316 aa7.47□□□□□ -1.21
CHD2-221ENST00000635856 H0YHG0 523 aa7.46□□□□□ -1.21
CHD2-221ENST00000635856 NPM1P06748 294 aaKnown RBP eCLIP7.46□□□□□ -1.21
CHD2-221ENST00000635856 LIG1P18858 919 aa7.46□□□□□ -1.21
CHD2-221ENST00000635856 SARNPP82979 210 aaKnown RBP7.46□□□□□ -1.21
CHD2-221ENST00000635856 NBPF11Q86T75 865 aa7.46□□□□□ -1.21
CHD2-221ENST00000635856 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
CHD2-221ENST00000635856 TMX1Q9H3N1 280 aa7.46□□□□□ -1.22
CHD2-221ENST00000635856 HTATSF1O43719 755 aaKnown RBP7.46□□□□□ -1.22
CHD2-221ENST00000635856 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
CHD2-221ENST00000635856 MPNDQ8N594 471 aa7.46□□□□□ -1.22
CHD2-221ENST00000635856 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
CHD2-221ENST00000635856 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
CHD2-221ENST00000635856 NBPF6Q5VWK0 638 aa7.45□□□□□ -1.22
CHD2-221ENST00000635856 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
CHD2-221ENST00000635856 NBPF4Q96M43 638 aa7.45□□□□□ -1.22
CHD2-221ENST00000635856 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
CHD2-221ENST00000635856 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
CHD2-221ENST00000635856 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 FANCD2Q9BXW9 1451 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 FEZ2Q9UHY8 353 aaPredicted RBP7.44□□□□□ -1.22
CHD2-221ENST00000635856 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 PANK3Q9H999 370 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 PRR29P0C7W0 189 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 DRC1Q96MC2 740 aa7.44□□□□□ -1.22
CHD2-221ENST00000635856 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
CHD2-221ENST00000635856 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 A0A1B0GUL7 405 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 SENP3-EIF4A1A0A087X0R7 540 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 C10orf67Q8IYJ2 551 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 DHX16O60231 1041 aaKnown RBP7.43□□□□□ -1.22
CHD2-221ENST00000635856 CASQ1P31415 396 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 BCL2L12Q9HB09 334 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 DONSONQ9NYP3 566 aa7.43□□□□□ -1.22
CHD2-221ENST00000635856 TXLNBQ8N3L3 684 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 NOL10Q9BSC4 688 aaKnown RBP7.42□□□□□ -1.22
CHD2-221ENST00000635856 SH3BP1Q9Y3L3 701 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 WDR97A6NE52 1622 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 GUCY2CP25092 1073 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD2-221ENST00000635856 TERF2Q15554 542 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 TTC31Q49AM3 519 aaPredicted RBP7.42□□□□□ -1.22
CHD2-221ENST00000635856 RPAINQ86UA6 219 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 TULP2O00295 520 aa7.42□□□□□ -1.22
CHD2-221ENST00000635856 TRHP20396 242 aaPredicted RBP7.42□□□□□ -1.22
CHD2-221ENST00000635856 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms