RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
LINC00339-210ENST00000635675 KIF1BO60333 1816 aa14.36□□□□□ -0.11
LINC00339-210ENST00000635675 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
LINC00339-210ENST00000635675 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00339-210ENST00000635675 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
LINC00339-210ENST00000635675 ANKRD30BQ9BXX2 1392 aa14.34□□□□□ -0.11
LINC00339-210ENST00000635675 ZNF335Q9H4Z2 1342 aaPredicted RBP14.33□□□□□ -0.12
LINC00339-210ENST00000635675 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
LINC00339-210ENST00000635675 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
LINC00339-210ENST00000635675 PPP1R15AO75807 674 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-210ENST00000635675 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-210ENST00000635675 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
LINC00339-210ENST00000635675 SPATA31E1Q6ZUB1 1445 aa14.31□□□□□ -0.12
LINC00339-210ENST00000635675 RPGRIP1LQ68CZ1 1315 aa14.3□□□□□ -0.12
LINC00339-210ENST00000635675 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
LINC00339-210ENST00000635675 NEXMIFQ5QGS0 1516 aa14.3□□□□□ -0.12
LINC00339-210ENST00000635675 CERKQ8TCT0 537 aa14.28□□□□□ -0.12
LINC00339-210ENST00000635675 BCANQ96GW7 911 aa14.28□□□□□ -0.12
LINC00339-210ENST00000635675 RGL3Q3MIN7 710 aa14.27□□□□□ -0.12
LINC00339-210ENST00000635675 TBX22Q9Y458 520 aa14.27□□□□□ -0.12
LINC00339-210ENST00000635675 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-210ENST00000635675 ADAMTS13Q76LX8 1427 aa14.26□□□□□ -0.13
LINC00339-210ENST00000635675 STRCP1A6NGW2 1772 aa14.25□□□□□ -0.13
LINC00339-210ENST00000635675 PPLO60437 1756 aa14.25□□□□□ -0.13
LINC00339-210ENST00000635675 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
LINC00339-210ENST00000635675 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
LINC00339-210ENST00000635675 CPS1P31327 1500 aa14.24□□□□□ -0.13
LINC00339-210ENST00000635675 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
LINC00339-210ENST00000635675 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
LINC00339-210ENST00000635675 KCNA6P17658 529 aa14.23□□□□□ -0.13
LINC00339-210ENST00000635675 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
LINC00339-210ENST00000635675 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
LINC00339-210ENST00000635675 ADGRF5Q8IZF2 1346 aa14.21□□□□□ -0.13
LINC00339-210ENST00000635675 PIK3R4Q99570 1358 aa14.2□□□□□ -0.14
LINC00339-210ENST00000635675 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
LINC00339-210ENST00000635675 IQSEC2Q5JU85 1478 aa14.2□□□□□ -0.14
LINC00339-210ENST00000635675 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
LINC00339-210ENST00000635675 NWD1Q149M9 1564 aa14.18□□□□□ -0.14
LINC00339-210ENST00000635675 METP08581 1390 aa14.18□□□□□ -0.14
LINC00339-210ENST00000635675 PTPRUQ92729 1446 aa14.17□□□□□ -0.14
LINC00339-210ENST00000635675 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
LINC00339-210ENST00000635675 ALKQ9UM73 1620 aa14.17□□□□□ -0.14
LINC00339-210ENST00000635675 FBXO41Q8TF61 875 aa14.16□□□□□ -0.14
LINC00339-210ENST00000635675 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
LINC00339-210ENST00000635675 MYOM2P54296 1465 aa14.16□□□□□ -0.14
LINC00339-210ENST00000635675 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
LINC00339-210ENST00000635675 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-210ENST00000635675 DCAF11Q8TEB1 546 aa14.15□□□□□ -0.14
LINC00339-210ENST00000635675 STAC3Q96MF2 364 aa14.15□□□□□ -0.14
LINC00339-210ENST00000635675 AMOTL2Q9Y2J4 779 aa14.15□□□□□ -0.14
LINC00339-210ENST00000635675 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
LINC00339-210ENST00000635675 NKTRP30414 1462 aaKnown RBP14.15□□□□□ -0.14
LINC00339-210ENST00000635675 XIRP1Q702N8 1843 aaKnown RBP14.14□□□□□ -0.15
LINC00339-210ENST00000635675 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
LINC00339-210ENST00000635675 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
LINC00339-210ENST00000635675 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
LINC00339-210ENST00000635675 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
LINC00339-210ENST00000635675 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
LINC00339-210ENST00000635675 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
LINC00339-210ENST00000635675 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
LINC00339-210ENST00000635675 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-210ENST00000635675 UBAP1LF5GYI3 381 aa14.1□□□□□ -0.15
LINC00339-210ENST00000635675 L3MBTL2Q969R5 705 aa14.1□□□□□ -0.15
LINC00339-210ENST00000635675 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
LINC00339-210ENST00000635675 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
LINC00339-210ENST00000635675 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
LINC00339-210ENST00000635675 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
LINC00339-210ENST00000635675 LAMC1P11047 1609 aa14.08□□□□□ -0.16
LINC00339-210ENST00000635675 TOM1O60784 492 aa14.07□□□□□ -0.16
LINC00339-210ENST00000635675 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
LINC00339-210ENST00000635675 ABCC11Q96J66 1382 aa14.06□□□□□ -0.16
LINC00339-210ENST00000635675 ROBO2Q9HCK4 1378 aa14.06□□□□□ -0.16
LINC00339-210ENST00000635675 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
LINC00339-210ENST00000635675 C19orf44Q9H6X5 657 aa14.06□□□□□ -0.16
LINC00339-210ENST00000635675 STK26Q9P289 416 aa14.06□□□□□ -0.16
LINC00339-210ENST00000635675 TECPR2O15040 1411 aa14.05□□□□□ -0.16
LINC00339-210ENST00000635675 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
LINC00339-210ENST00000635675 MSH6P52701 1360 aa14.05□□□□□ -0.16
LINC00339-210ENST00000635675 ADGRB1O14514 1584 aa14.04□□□□□ -0.16
LINC00339-210ENST00000635675 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
LINC00339-210ENST00000635675 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
LINC00339-210ENST00000635675 SIRT1Q96EB6 747 aa14.03□□□□□ -0.16
LINC00339-210ENST00000635675 PIP4K2BP78356 416 aa14.02□□□□□ -0.16
LINC00339-210ENST00000635675 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-210ENST00000635675 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
LINC00339-210ENST00000635675 KIAA1210Q9ULL0 1709 aa14.01□□□□□ -0.17
LINC00339-210ENST00000635675 WAPLQ7Z5K2 1190 aa14.01□□□□□ -0.17
LINC00339-210ENST00000635675 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
LINC00339-210ENST00000635675 TONSLQ96HA7 1378 aa14□□□□□ -0.17
LINC00339-210ENST00000635675 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
LINC00339-210ENST00000635675 SLAIN2Q9P270 581 aa14□□□□□ -0.17
LINC00339-210ENST00000635675 FAM135BQ49AJ0 1406 aa14□□□□□ -0.17
LINC00339-210ENST00000635675 ATF3P18847 181 aa13.99□□□□□ -0.17
LINC00339-210ENST00000635675 DCCP43146 1447 aa13.99□□□□□ -0.17
LINC00339-210ENST00000635675 NBPF1Q3BBV0 1214 aa13.99□□□□□ -0.17
LINC00339-210ENST00000635675 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
LINC00339-210ENST00000635675 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
LINC00339-210ENST00000635675 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
LINC00339-210ENST00000635675 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
LINC00339-210ENST00000635675 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms