RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 PCDHGA4Q9Y5G9 962 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
SMARCA2-244ENST00000635659 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
SMARCA2-244ENST00000635659 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
SMARCA2-244ENST00000635659 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-244ENST00000635659 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
SMARCA2-244ENST00000635659 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
SMARCA2-244ENST00000635659 CCDC97Q96F63 343 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-244ENST00000635659 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
SMARCA2-244ENST00000635659 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
SMARCA2-244ENST00000635659 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-244ENST00000635659 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
SMARCA2-244ENST00000635659 KDM4FA0A1W2PPD8 638 aa11.82□□□□□ -0.52
SMARCA2-244ENST00000635659 C7P10643 843 aa11.82□□□□□ -0.52
SMARCA2-244ENST00000635659 FOSBP53539 338 aa11.82□□□□□ -0.52
SMARCA2-244ENST00000635659 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
SMARCA2-244ENST00000635659 RFC5P40937 340 aa11.81□□□□□ -0.52
SMARCA2-244ENST00000635659 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
SMARCA2-244ENST00000635659 CUX1P39880 1505 aa11.81□□□□□ -0.52
SMARCA2-244ENST00000635659 LHX8Q68G74 356 aa11.8□□□□□ -0.52
SMARCA2-244ENST00000635659 TMEM259Q4ZIN3 620 aa11.78□□□□□ -0.52
SMARCA2-244ENST00000635659 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
SMARCA2-244ENST00000635659 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
SMARCA2-244ENST00000635659 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
SMARCA2-244ENST00000635659 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
SMARCA2-244ENST00000635659 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.53
SMARCA2-244ENST00000635659 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
SMARCA2-244ENST00000635659 SNRKQ9NRH2 765 aa11.77□□□□□ -0.53
SMARCA2-244ENST00000635659 CHD1O14646 1710 aa11.77□□□□□ -0.53
SMARCA2-244ENST00000635659 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
SMARCA2-244ENST00000635659 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
SMARCA2-244ENST00000635659 CCDC9Q9Y3X0 531 aaKnown RBP11.76□□□□□ -0.53
SMARCA2-244ENST00000635659 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
SMARCA2-244ENST00000635659 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
SMARCA2-244ENST00000635659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 PRSS12P56730 875 aa11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
SMARCA2-244ENST00000635659 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
SMARCA2-244ENST00000635659 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
SMARCA2-244ENST00000635659 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
SMARCA2-244ENST00000635659 SOCS7O14512 581 aa11.72□□□□□ -0.53
SMARCA2-244ENST00000635659 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
SMARCA2-244ENST00000635659 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
SMARCA2-244ENST00000635659 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
SMARCA2-244ENST00000635659 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
SMARCA2-244ENST00000635659 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCA2-244ENST00000635659 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
SMARCA2-244ENST00000635659 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
SMARCA2-244ENST00000635659 ADAM33Q9BZ11 813 aa11.7□□□□□ -0.54
SMARCA2-244ENST00000635659 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
SMARCA2-244ENST00000635659 SPTLC1O15269 473 aa11.69□□□□□ -0.54
SMARCA2-244ENST00000635659 CD46P15529 392 aa11.69□□□□□ -0.54
SMARCA2-244ENST00000635659 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
SMARCA2-244ENST00000635659 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
SMARCA2-244ENST00000635659 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
SMARCA2-244ENST00000635659 SOGA1O94964 1423 aa11.68□□□□□ -0.54
SMARCA2-244ENST00000635659 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
SMARCA2-244ENST00000635659 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
SMARCA2-244ENST00000635659 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
SMARCA2-244ENST00000635659 GJA5P36382 358 aa11.66□□□□□ -0.54
SMARCA2-244ENST00000635659 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
SMARCA2-244ENST00000635659 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
SMARCA2-244ENST00000635659 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
SMARCA2-244ENST00000635659 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
SMARCA2-244ENST00000635659 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
SMARCA2-244ENST00000635659 EYA1Q99502 592 aa11.65□□□□□ -0.54
SMARCA2-244ENST00000635659 PRM3Q9NNZ6 103 aa11.65□□□□□ -0.54
SMARCA2-244ENST00000635659 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
SMARCA2-244ENST00000635659 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
SMARCA2-244ENST00000635659 RETREG2Q8NC44 543 aa11.63□□□□□ -0.55
SMARCA2-244ENST00000635659 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
SMARCA2-244ENST00000635659 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
SMARCA2-244ENST00000635659 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-244ENST00000635659 PPP1R15AO75807 674 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-244ENST00000635659 NUDT7P0C024 238 aa11.62□□□□□ -0.55
SMARCA2-244ENST00000635659 WRNQ14191 1432 aaPredicted RBP eCLIP11.61□□□□□ -0.55
SMARCA2-244ENST00000635659 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
SMARCA2-244ENST00000635659 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
SMARCA2-244ENST00000635659 LILRB3O75022 631 aa11.61□□□□□ -0.55
SMARCA2-244ENST00000635659 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
SMARCA2-244ENST00000635659 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
SMARCA2-244ENST00000635659 DNAJB2P25686 324 aa11.6□□□□□ -0.55
SMARCA2-244ENST00000635659 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
SMARCA2-244ENST00000635659 ABL2P42684 1182 aa11.59□□□□□ -0.55
SMARCA2-244ENST00000635659 QPCTQ16769 361 aa11.59□□□□□ -0.55
SMARCA2-244ENST00000635659 CSPP1Q1MSJ5 1256 aa11.59□□□□□ -0.55
SMARCA2-244ENST00000635659 CALR3Q96L12 384 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-244ENST00000635659 ADAMTS12P58397 1594 aa11.58□□□□□ -0.55
SMARCA2-244ENST00000635659 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
SMARCA2-244ENST00000635659 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
SMARCA2-244ENST00000635659 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
SMARCA2-244ENST00000635659 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
SMARCA2-244ENST00000635659 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 AP1G2O75843 785 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms