RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 NRXN1Q9ULB1 1477 aa14.06□□□□□ -0.16
LINC01646-203ENST00000635556 CEBPAP49715 358 aaPredicted RBP14.06□□□□□ -0.16
LINC01646-203ENST00000635556 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
LINC01646-203ENST00000635556 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
LINC01646-203ENST00000635556 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
LINC01646-203ENST00000635556 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
LINC01646-203ENST00000635556 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
LINC01646-203ENST00000635556 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
LINC01646-203ENST00000635556 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
LINC01646-203ENST00000635556 SLIT1O75093 1534 aa14.02□□□□□ -0.16
LINC01646-203ENST00000635556 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
LINC01646-203ENST00000635556 LAMC1P11047 1609 aa14.01□□□□□ -0.17
LINC01646-203ENST00000635556 ARHGAP23Q9P227 1491 aa14.01□□□□□ -0.17
LINC01646-203ENST00000635556 PIK3C2GO75747 1445 aa14.01□□□□□ -0.17
LINC01646-203ENST00000635556 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
LINC01646-203ENST00000635556 DCAF11Q8TEB1 546 aa14.01□□□□□ -0.17
LINC01646-203ENST00000635556 NBPF8Q3BBV2 869 aa14□□□□□ -0.17
LINC01646-203ENST00000635556 RIMS2Q9UQ26 1411 aa13.99□□□□□ -0.17
LINC01646-203ENST00000635556 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
LINC01646-203ENST00000635556 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
LINC01646-203ENST00000635556 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
LINC01646-203ENST00000635556 TMEM2Q9UHN6 1383 aa13.98□□□□□ -0.17
LINC01646-203ENST00000635556 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
LINC01646-203ENST00000635556 MSH5O43196 834 aa13.97□□□□□ -0.17
LINC01646-203ENST00000635556 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.17
LINC01646-203ENST00000635556 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
LINC01646-203ENST00000635556 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
LINC01646-203ENST00000635556 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
LINC01646-203ENST00000635556 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
LINC01646-203ENST00000635556 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
LINC01646-203ENST00000635556 ADGRB1O14514 1584 aa13.93□□□□□ -0.18
LINC01646-203ENST00000635556 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01646-203ENST00000635556 IQGAP1P46940 1657 aa13.93□□□□□ -0.18
LINC01646-203ENST00000635556 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
LINC01646-203ENST00000635556 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
LINC01646-203ENST00000635556 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
LINC01646-203ENST00000635556 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
LINC01646-203ENST00000635556 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
LINC01646-203ENST00000635556 DIP2AQ14689 1571 aa13.91□□□□□ -0.18
LINC01646-203ENST00000635556 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
LINC01646-203ENST00000635556 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.18
LINC01646-203ENST00000635556 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
LINC01646-203ENST00000635556 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
LINC01646-203ENST00000635556 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
LINC01646-203ENST00000635556 USP47Q96K76 1375 aa13.88□□□□□ -0.19
LINC01646-203ENST00000635556 ADAMTS13Q76LX8 1427 aa13.88□□□□□ -0.19
LINC01646-203ENST00000635556 MED14O60244 1454 aa13.87□□□□□ -0.19
LINC01646-203ENST00000635556 NUTM2DQ5VT03 806 aaPredicted RBP13.87□□□□□ -0.19
LINC01646-203ENST00000635556 LTKP29376 864 aa13.86□□□□□ -0.19
LINC01646-203ENST00000635556 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
LINC01646-203ENST00000635556 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
LINC01646-203ENST00000635556 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
LINC01646-203ENST00000635556 EID1Q9Y6B2 187 aa13.86□□□□□ -0.19
LINC01646-203ENST00000635556 KNDC1Q76NI1 1749 aa13.85□□□□□ -0.19
LINC01646-203ENST00000635556 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
LINC01646-203ENST00000635556 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC01646-203ENST00000635556 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
LINC01646-203ENST00000635556 DLC1Q96QB1 1528 aa13.83□□□□□ -0.2
LINC01646-203ENST00000635556 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
LINC01646-203ENST00000635556 CPS1P31327 1500 aa13.82□□□□□ -0.2
LINC01646-203ENST00000635556 TECPR2O15040 1411 aa13.81□□□□□ -0.2
LINC01646-203ENST00000635556 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
LINC01646-203ENST00000635556 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
LINC01646-203ENST00000635556 ANKLE2Q86XL3 938 aa13.81□□□□□ -0.2
LINC01646-203ENST00000635556 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
LINC01646-203ENST00000635556 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
LINC01646-203ENST00000635556 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
LINC01646-203ENST00000635556 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
LINC01646-203ENST00000635556 XRN1Q8IZH2 1706 aaKnown RBP13.8□□□□□ -0.2
LINC01646-203ENST00000635556 METP08581 1390 aa13.79□□□□□ -0.2
LINC01646-203ENST00000635556 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
LINC01646-203ENST00000635556 SBNO2Q9Y2G9 1366 aa13.79□□□□□ -0.2
LINC01646-203ENST00000635556 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
LINC01646-203ENST00000635556 PTCH1Q13635 1447 aa13.77□□□□□ -0.21
LINC01646-203ENST00000635556 NWD1Q149M9 1564 aa13.77□□□□□ -0.21
LINC01646-203ENST00000635556 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
LINC01646-203ENST00000635556 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
LINC01646-203ENST00000635556 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
LINC01646-203ENST00000635556 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
LINC01646-203ENST00000635556 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
LINC01646-203ENST00000635556 PTPRUQ92729 1446 aa13.75□□□□□ -0.21
LINC01646-203ENST00000635556 ST20-MTHFSA0A0A6YYL1 179 aa13.74□□□□□ -0.21
LINC01646-203ENST00000635556 TESK2Q96S53 571 aa13.74□□□□□ -0.21
LINC01646-203ENST00000635556 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
LINC01646-203ENST00000635556 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
LINC01646-203ENST00000635556 HSPA2P54652 639 aa13.73□□□□□ -0.21
LINC01646-203ENST00000635556 BCANQ96GW7 911 aa13.73□□□□□ -0.21
LINC01646-203ENST00000635556 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
LINC01646-203ENST00000635556 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
LINC01646-203ENST00000635556 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
LINC01646-203ENST00000635556 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
LINC01646-203ENST00000635556 SLC26A8Q96RN1 970 aa13.72□□□□□ -0.21
LINC01646-203ENST00000635556 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
LINC01646-203ENST00000635556 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
LINC01646-203ENST00000635556 CCDC7Q96M83 1385 aa13.71□□□□□ -0.22
LINC01646-203ENST00000635556 TULP4Q9NRJ4 1543 aa13.7□□□□□ -0.22
LINC01646-203ENST00000635556 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
LINC01646-203ENST00000635556 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
LINC01646-203ENST00000635556 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
LINC01646-203ENST00000635556 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms