RNA–Protein interactions for RNA: ENST00000635406.1

ATP7B-216, Transcript of ATPase copper transporting beta, humanhuman

TSL 4

Gene ATP7B, Length 506 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-216ENST00000635406 KIF1BO60333 1816 aa31.28■■■□□ 2.6
ATP7B-216ENST00000635406 FBXO41Q8TF61 875 aa31.25■■■□□ 2.59
ATP7B-216ENST00000635406 CPS1P31327 1500 aa31.24■■■□□ 2.59
ATP7B-216ENST00000635406 MPHOSPH9Q99550 1183 aa31.23■■■□□ 2.59
ATP7B-216ENST00000635406 SENP3Q9H4L4 574 aaPredicted RBP31.23■■■□□ 2.59
ATP7B-216ENST00000635406 IQSEC2Q5JU85 1478 aa31.21■■■□□ 2.59
ATP7B-216ENST00000635406 NUTM2DQ5VT03 806 aaPredicted RBP31.2■■■□□ 2.59
ATP7B-216ENST00000635406 PLEKHG1Q9ULL1 1385 aa31.19■■■□□ 2.58
ATP7B-216ENST00000635406 PPP1R15AO75807 674 aaPredicted RBP31.17■■■□□ 2.58
ATP7B-216ENST00000635406 NEXMIFQ5QGS0 1516 aa31.17■■■□□ 2.58
ATP7B-216ENST00000635406 SLC26A8Q96RN1 970 aa31.15■■■□□ 2.58
ATP7B-216ENST00000635406 NRXN3Q9Y4C0 1643 aa31.13■■■□□ 2.57
ATP7B-216ENST00000635406 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.12■■■□□ 2.57
ATP7B-216ENST00000635406 NWD1Q149M9 1564 aa31.11■■■□□ 2.57
ATP7B-216ENST00000635406 ZNF326Q5BKZ1 582 aaKnown RBP31.11■■■□□ 2.57
ATP7B-216ENST00000635406 LRRC7Q96NW7 1537 aa31.11■■■□□ 2.57
ATP7B-216ENST00000635406 ACIN1Q9UKV3 1341 aaKnown RBP31.11■■■□□ 2.57
ATP7B-216ENST00000635406 ADAMTS13Q76LX8 1427 aa31.1■■■□□ 2.57
ATP7B-216ENST00000635406 BCANQ96GW7 911 aa31.1■■■□□ 2.57
ATP7B-216ENST00000635406 CCDC144AA2RUR9 1427 aa31.09■■■□□ 2.57
ATP7B-216ENST00000635406 HDGFP51858 240 aaKnown RBP31.09■■■□□ 2.57
ATP7B-216ENST00000635406 XIRP1Q702N8 1843 aaKnown RBP31.09■■■□□ 2.57
ATP7B-216ENST00000635406 DIP2AQ14689 1571 aa31.09■■■□□ 2.57
ATP7B-216ENST00000635406 PPLO60437 1756 aa31.07■■■□□ 2.56
ATP7B-216ENST00000635406 SETBP1Q9Y6X0 1596 aa31.06■■■□□ 2.56
ATP7B-216ENST00000635406 CHD2O14647 1828 aaKnown RBP31.06■■■□□ 2.56
ATP7B-216ENST00000635406 SPATA31E1Q6ZUB1 1445 aa31.02■■■□□ 2.56
ATP7B-216ENST00000635406 HRCP23327 699 aa31.01■■■□□ 2.55
ATP7B-216ENST00000635406 IFT172Q9UG01 1749 aa31.01■■■□□ 2.55
ATP7B-216ENST00000635406 ALKQ9UM73 1620 aa30.99■■■□□ 2.55
ATP7B-216ENST00000635406 NKTRP30414 1462 aaKnown RBP30.99■■■□□ 2.55
ATP7B-216ENST00000635406 KCNA6P17658 529 aa30.98■■■□□ 2.55
ATP7B-216ENST00000635406 UBAP1LF5GYI3 381 aa30.96■■■□□ 2.55
ATP7B-216ENST00000635406 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
ATP7B-216ENST00000635406 SETD1AO15047 1707 aaKnown RBP30.95■■■□□ 2.55
ATP7B-216ENST00000635406 ANKRD30BQ9BXX2 1392 aa30.92■■■□□ 2.54
ATP7B-216ENST00000635406 PTPRUQ92729 1446 aa30.92■■■□□ 2.54
ATP7B-216ENST00000635406 XRN1Q8IZH2 1706 aaKnown RBP30.92■■■□□ 2.54
ATP7B-216ENST00000635406 TMEM94Q12767 1356 aa30.92■■■□□ 2.54
ATP7B-216ENST00000635406 RGL3Q3MIN7 710 aa30.9■■■□□ 2.54
ATP7B-216ENST00000635406 RBM33Q96EV2 1170 aaKnown RBP30.9■■■□□ 2.54
ATP7B-216ENST00000635406 RPGRIP1LQ68CZ1 1315 aa30.9■■■□□ 2.54
ATP7B-216ENST00000635406 PIK3R4Q99570 1358 aa30.89■■■□□ 2.54
ATP7B-216ENST00000635406 METP08581 1390 aa30.88■■■□□ 2.53
ATP7B-216ENST00000635406 VGFO15240 615 aaPredicted RBP30.85■■■□□ 2.53
ATP7B-216ENST00000635406 PROSER2Q86WR7 435 aaPredicted RBP30.85■■■□□ 2.53
ATP7B-216ENST00000635406 ADGRF5Q8IZF2 1346 aa30.82■■■□□ 2.52
ATP7B-216ENST00000635406 TOM1O60784 492 aa30.8■■■□□ 2.52
ATP7B-216ENST00000635406 PIP4K2BP78356 416 aa30.8■■■□□ 2.52
ATP7B-216ENST00000635406 AMOTL2Q9Y2J4 779 aa30.79■■■□□ 2.52
ATP7B-216ENST00000635406 SCAF1Q9H7N4 1312 aaKnown RBP30.78■■■□□ 2.52
ATP7B-216ENST00000635406 PIK3C2GO75747 1445 aa30.76■■■□□ 2.51
ATP7B-216ENST00000635406 MYOM2P54296 1465 aa30.76■■■□□ 2.51
ATP7B-216ENST00000635406 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
ATP7B-216ENST00000635406 ASXL1Q8IXJ9 1541 aa30.74■■■□□ 2.51
ATP7B-216ENST00000635406 NRXN1Q9ULB1 1477 aa30.73■■■□□ 2.51
ATP7B-216ENST00000635406 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.71■■■□□ 2.51
ATP7B-216ENST00000635406 MSH6P52701 1360 aa30.7■■■□□ 2.51
ATP7B-216ENST00000635406 NALCNQ8IZF0 1738 aa30.68■■■□□ 2.5
ATP7B-216ENST00000635406 NCOA3Q9Y6Q9 1424 aa30.68■■■□□ 2.5
ATP7B-216ENST00000635406 PTCH1Q13635 1447 aa30.66■■■□□ 2.5
ATP7B-216ENST00000635406 LAMC1P11047 1609 aa30.65■■■□□ 2.5
ATP7B-216ENST00000635406 PRAG1Q86YV5 1406 aa30.65■■■□□ 2.5
ATP7B-216ENST00000635406 C14orf37Q86TY3 774 aa30.64■■■□□ 2.5
ATP7B-216ENST00000635406 ROBO1Q9Y6N7 1651 aa30.64■■■□□ 2.5
ATP7B-216ENST00000635406 ROBO2Q9HCK4 1378 aa30.64■■■□□ 2.5
ATP7B-216ENST00000635406 KNDC1Q76NI1 1749 aa30.63■■■□□ 2.49
ATP7B-216ENST00000635406 DHX57Q6P158 1386 aaKnown RBP30.63■■■□□ 2.49
ATP7B-216ENST00000635406 HSPA1LP34931 641 aa30.62■■■□□ 2.49
ATP7B-216ENST00000635406 ADGRL3Q9HAR2 1447 aa30.59■■■□□ 2.49
ATP7B-216ENST00000635406 TMEM132EQ6IEE7 984 aa30.57■■■□□ 2.48
ATP7B-216ENST00000635406 DCAF11Q8TEB1 546 aa30.56■■■□□ 2.48
ATP7B-216ENST00000635406 TECPR2O15040 1411 aa30.56■■■□□ 2.48
ATP7B-216ENST00000635406 DCCP43146 1447 aa30.56■■■□□ 2.48
ATP7B-216ENST00000635406 FAM135BQ49AJ0 1406 aa30.56■■■□□ 2.48
ATP7B-216ENST00000635406 LRPPRCP42704 1394 aaKnown RBP30.55■■■□□ 2.48
ATP7B-216ENST00000635406 CFAP70Q5T0N1 1121 aa30.55■■■□□ 2.48
ATP7B-216ENST00000635406 C19orf44Q9H6X5 657 aa30.55■■■□□ 2.48
ATP7B-216ENST00000635406 KDM2AQ9Y2K7 1162 aa30.55■■■□□ 2.48
ATP7B-216ENST00000635406 C14orf93Q9H972 538 aaKnown RBP30.54■■■□□ 2.48
ATP7B-216ENST00000635406 YTHDC2Q9H6S0 1430 aaKnown RBP30.54■■■□□ 2.48
ATP7B-216ENST00000635406 STK26Q9P289 416 aa30.52■■■□□ 2.48
ATP7B-216ENST00000635406 ADGRB1O14514 1584 aa30.52■■■□□ 2.48
ATP7B-216ENST00000635406 SLAIN2Q9P270 581 aa30.51■■■□□ 2.47
ATP7B-216ENST00000635406 ATF3P18847 181 aa30.5■■■□□ 2.47
ATP7B-216ENST00000635406 CADPS2Q86UW7 1296 aa30.49■■■□□ 2.47
ATP7B-216ENST00000635406 SIN3AQ96ST3 1273 aa30.48■■■□□ 2.47
ATP7B-216ENST00000635406 ABCC11Q96J66 1382 aa30.48■■■□□ 2.47
ATP7B-216ENST00000635406 MST1RQ04912 1400 aa30.47■■■□□ 2.47
ATP7B-216ENST00000635406 PLEKHH1Q9ULM0 1364 aa30.47■■■□□ 2.47
ATP7B-216ENST00000635406 PHLPP1O60346 1717 aa30.44■■■□□ 2.46
ATP7B-216ENST00000635406 CDC42BPGQ6DT37 1551 aa30.43■■■□□ 2.46
ATP7B-216ENST00000635406 WAPLQ7Z5K2 1190 aa30.42■■■□□ 2.46
ATP7B-216ENST00000635406 KIAA1210Q9ULL0 1709 aa30.4■■■□□ 2.46
ATP7B-216ENST00000635406 STAC3Q96MF2 364 aa30.4■■■□□ 2.46
ATP7B-216ENST00000635406 DLC1Q96QB1 1528 aa30.39■■■□□ 2.46
ATP7B-216ENST00000635406 COL16A1Q07092 1604 aaPredicted RBP30.39■■■□□ 2.46
ATP7B-216ENST00000635406 AHDC1Q5TGY3 1603 aaPredicted RBP30.38■■■□□ 2.45
ATP7B-216ENST00000635406 NEUROD1Q13562 356 aa30.38■■■□□ 2.45
ATP7B-216ENST00000635406 BRINP3Q76B58 766 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms