RNA–Protein interactions for RNA: ENST00000630887.2

SOX2-OT-258, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 748 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-258ENST00000630887 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
SOX2-OT-258ENST00000630887 ZNF335Q9H4Z2 1342 aaPredicted RBP20.11■□□□□ 0.81
SOX2-OT-258ENST00000630887 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
SOX2-OT-258ENST00000630887 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
SOX2-OT-258ENST00000630887 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
SOX2-OT-258ENST00000630887 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SOX2-OT-258ENST00000630887 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-258ENST00000630887 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
SOX2-OT-258ENST00000630887 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
SOX2-OT-258ENST00000630887 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-258ENST00000630887 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-258ENST00000630887 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
SOX2-OT-258ENST00000630887 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
SOX2-OT-258ENST00000630887 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
SOX2-OT-258ENST00000630887 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
SOX2-OT-258ENST00000630887 ANKRD30BQ9BXX2 1392 aa20.02■□□□□ 0.8
SOX2-OT-258ENST00000630887 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
SOX2-OT-258ENST00000630887 KIF1BO60333 1816 aa20■□□□□ 0.79
SOX2-OT-258ENST00000630887 BCANQ96GW7 911 aa19.99■□□□□ 0.79
SOX2-OT-258ENST00000630887 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SOX2-OT-258ENST00000630887 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
SOX2-OT-258ENST00000630887 CPS1P31327 1500 aa19.97■□□□□ 0.79
SOX2-OT-258ENST00000630887 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
SOX2-OT-258ENST00000630887 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
SOX2-OT-258ENST00000630887 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
SOX2-OT-258ENST00000630887 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SOX2-OT-258ENST00000630887 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
SOX2-OT-258ENST00000630887 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
SOX2-OT-258ENST00000630887 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
SOX2-OT-258ENST00000630887 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
SOX2-OT-258ENST00000630887 KCNA6P17658 529 aa19.91■□□□□ 0.78
SOX2-OT-258ENST00000630887 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
SOX2-OT-258ENST00000630887 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
SOX2-OT-258ENST00000630887 PPLO60437 1756 aa19.9■□□□□ 0.78
SOX2-OT-258ENST00000630887 FBXO41Q8TF61 875 aa19.89■□□□□ 0.77
SOX2-OT-258ENST00000630887 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
SOX2-OT-258ENST00000630887 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
SOX2-OT-258ENST00000630887 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
SOX2-OT-258ENST00000630887 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
SOX2-OT-258ENST00000630887 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
SOX2-OT-258ENST00000630887 METP08581 1390 aa19.86■□□□□ 0.77
SOX2-OT-258ENST00000630887 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
SOX2-OT-258ENST00000630887 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
SOX2-OT-258ENST00000630887 MYOM2P54296 1465 aa19.83■□□□□ 0.76
SOX2-OT-258ENST00000630887 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
SOX2-OT-258ENST00000630887 TMEM94Q12767 1356 aa19.83■□□□□ 0.76
SOX2-OT-258ENST00000630887 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
SOX2-OT-258ENST00000630887 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SOX2-OT-258ENST00000630887 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
SOX2-OT-258ENST00000630887 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
SOX2-OT-258ENST00000630887 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
SOX2-OT-258ENST00000630887 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-258ENST00000630887 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
SOX2-OT-258ENST00000630887 SETD1AO15047 1707 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-258ENST00000630887 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
SOX2-OT-258ENST00000630887 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
SOX2-OT-258ENST00000630887 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
SOX2-OT-258ENST00000630887 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
SOX2-OT-258ENST00000630887 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
SOX2-OT-258ENST00000630887 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
SOX2-OT-258ENST00000630887 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
SOX2-OT-258ENST00000630887 C14orf93Q9H972 538 aaKnown RBP19.73■□□□□ 0.75
SOX2-OT-258ENST00000630887 PRAG1Q86YV5 1406 aa19.73■□□□□ 0.75
SOX2-OT-258ENST00000630887 MSH5O43196 834 aa19.72■□□□□ 0.75
SOX2-OT-258ENST00000630887 TOM1O60784 492 aa19.72■□□□□ 0.75
SOX2-OT-258ENST00000630887 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
SOX2-OT-258ENST00000630887 NCOA3Q9Y6Q9 1424 aa19.72■□□□□ 0.75
SOX2-OT-258ENST00000630887 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
SOX2-OT-258ENST00000630887 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
SOX2-OT-258ENST00000630887 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
SOX2-OT-258ENST00000630887 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
SOX2-OT-258ENST00000630887 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
SOX2-OT-258ENST00000630887 MSH6P52701 1360 aa19.7■□□□□ 0.74
SOX2-OT-258ENST00000630887 LRPPRCP42704 1394 aaKnown RBP19.69■□□□□ 0.74
SOX2-OT-258ENST00000630887 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
SOX2-OT-258ENST00000630887 LAMC1P11047 1609 aa19.68■□□□□ 0.74
SOX2-OT-258ENST00000630887 TECPR2O15040 1411 aa19.68■□□□□ 0.74
SOX2-OT-258ENST00000630887 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
SOX2-OT-258ENST00000630887 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
SOX2-OT-258ENST00000630887 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
SOX2-OT-258ENST00000630887 STK26Q9P289 416 aa19.66■□□□□ 0.74
SOX2-OT-258ENST00000630887 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
SOX2-OT-258ENST00000630887 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
SOX2-OT-258ENST00000630887 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
SOX2-OT-258ENST00000630887 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
SOX2-OT-258ENST00000630887 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
SOX2-OT-258ENST00000630887 DCCP43146 1447 aa19.61■□□□□ 0.73
SOX2-OT-258ENST00000630887 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
SOX2-OT-258ENST00000630887 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.61■□□□□ 0.73
SOX2-OT-258ENST00000630887 PLEKHH1Q9ULM0 1364 aa19.6■□□□□ 0.73
SOX2-OT-258ENST00000630887 NALCNQ8IZF0 1738 aa19.6■□□□□ 0.73
SOX2-OT-258ENST00000630887 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
SOX2-OT-258ENST00000630887 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
SOX2-OT-258ENST00000630887 ATF3P18847 181 aa19.59■□□□□ 0.73
SOX2-OT-258ENST00000630887 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
SOX2-OT-258ENST00000630887 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
SOX2-OT-258ENST00000630887 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
SOX2-OT-258ENST00000630887 SIRT1Q96EB6 747 aa19.56■□□□□ 0.72
SOX2-OT-258ENST00000630887 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
SOX2-OT-258ENST00000630887 HSPA1LP34931 641 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms