RNA–Protein interactions for RNA: ENST00000629303.2

UBE2A-209, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 4

Gene UBE2A, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-209ENST00000629303 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
UBE2A-209ENST00000629303 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
UBE2A-209ENST00000629303 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
UBE2A-209ENST00000629303 CHD2O14647 1828 aaKnown RBP16.81■□□□□ 0.28
UBE2A-209ENST00000629303 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
UBE2A-209ENST00000629303 KCNA6P17658 529 aa16.79■□□□□ 0.28
UBE2A-209ENST00000629303 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
UBE2A-209ENST00000629303 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
UBE2A-209ENST00000629303 IQGAP3Q86VI3 1631 aa16.78■□□□□ 0.28
UBE2A-209ENST00000629303 ADAMTS13Q76LX8 1427 aa16.78■□□□□ 0.28
UBE2A-209ENST00000629303 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.28
UBE2A-209ENST00000629303 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
UBE2A-209ENST00000629303 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
UBE2A-209ENST00000629303 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
UBE2A-209ENST00000629303 POTEAQ6S8J7 498 aa16.76■□□□□ 0.27
UBE2A-209ENST00000629303 NRXN3Q9Y4C0 1643 aa16.76■□□□□ 0.27
UBE2A-209ENST00000629303 LRP6O75581 1613 aa16.75■□□□□ 0.27
UBE2A-209ENST00000629303 APLP2Q06481 763 aa16.75■□□□□ 0.27
UBE2A-209ENST00000629303 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
UBE2A-209ENST00000629303 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
UBE2A-209ENST00000629303 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
UBE2A-209ENST00000629303 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
UBE2A-209ENST00000629303 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
UBE2A-209ENST00000629303 DIP2AQ14689 1571 aa16.7■□□□□ 0.26
UBE2A-209ENST00000629303 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
UBE2A-209ENST00000629303 MSH6P52701 1360 aa16.68■□□□□ 0.26
UBE2A-209ENST00000629303 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
UBE2A-209ENST00000629303 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
UBE2A-209ENST00000629303 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
UBE2A-209ENST00000629303 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
UBE2A-209ENST00000629303 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
UBE2A-209ENST00000629303 BCANQ96GW7 911 aa16.64■□□□□ 0.25
UBE2A-209ENST00000629303 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
UBE2A-209ENST00000629303 TRPM2O94759 1503 aa16.64■□□□□ 0.25
UBE2A-209ENST00000629303 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
UBE2A-209ENST00000629303 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-209ENST00000629303 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
UBE2A-209ENST00000629303 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
UBE2A-209ENST00000629303 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
UBE2A-209ENST00000629303 JCADQ9P266 1359 aa16.62■□□□□ 0.25
UBE2A-209ENST00000629303 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
UBE2A-209ENST00000629303 NUP155O75694 1391 aa16.61■□□□□ 0.25
UBE2A-209ENST00000629303 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
UBE2A-209ENST00000629303 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
UBE2A-209ENST00000629303 ITGAEP38570 1179 aa16.59■□□□□ 0.25
UBE2A-209ENST00000629303 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
UBE2A-209ENST00000629303 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
UBE2A-209ENST00000629303 METP08581 1390 aa16.58■□□□□ 0.24
UBE2A-209ENST00000629303 MST1RQ04912 1400 aa16.57■□□□□ 0.24
UBE2A-209ENST00000629303 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
UBE2A-209ENST00000629303 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
UBE2A-209ENST00000629303 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE2A-209ENST00000629303 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
UBE2A-209ENST00000629303 DCCP43146 1447 aa16.53■□□□□ 0.24
UBE2A-209ENST00000629303 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
UBE2A-209ENST00000629303 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
UBE2A-209ENST00000629303 C19orf44Q9H6X5 657 aa16.51■□□□□ 0.23
UBE2A-209ENST00000629303 NAIPQ13075 1403 aa16.51■□□□□ 0.23
UBE2A-209ENST00000629303 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
UBE2A-209ENST00000629303 CADPS2Q86UW7 1296 aa16.49■□□□□ 0.23
UBE2A-209ENST00000629303 RRBP1Q9P2E9 1410 aaKnown RBP16.49■□□□□ 0.23
UBE2A-209ENST00000629303 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
UBE2A-209ENST00000629303 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
UBE2A-209ENST00000629303 ATF3P18847 181 aa16.47■□□□□ 0.23
UBE2A-209ENST00000629303 LAMC1P11047 1609 aa16.47■□□□□ 0.23
UBE2A-209ENST00000629303 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
UBE2A-209ENST00000629303 KIF1BO60333 1816 aa16.45■□□□□ 0.22
UBE2A-209ENST00000629303 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
UBE2A-209ENST00000629303 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
UBE2A-209ENST00000629303 RGS12O14924 1447 aa16.45■□□□□ 0.22
UBE2A-209ENST00000629303 PPLO60437 1756 aa16.44■□□□□ 0.22
UBE2A-209ENST00000629303 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
UBE2A-209ENST00000629303 PTCH1Q13635 1447 aa16.44■□□□□ 0.22
UBE2A-209ENST00000629303 C1orf167Q5SNV9 1468 aa16.43■□□□□ 0.22
UBE2A-209ENST00000629303 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
UBE2A-209ENST00000629303 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
UBE2A-209ENST00000629303 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
UBE2A-209ENST00000629303 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
UBE2A-209ENST00000629303 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
UBE2A-209ENST00000629303 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE2A-209ENST00000629303 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
UBE2A-209ENST00000629303 AFF2P51816 1311 aa16.42■□□□□ 0.22
UBE2A-209ENST00000629303 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
UBE2A-209ENST00000629303 HFM1A2PYH4 1435 aa16.39■□□□□ 0.21
UBE2A-209ENST00000629303 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
UBE2A-209ENST00000629303 EP400Q96L91 3159 aa16.38■□□□□ 0.21
UBE2A-209ENST00000629303 IFT172Q9UG01 1749 aa16.37■□□□□ 0.21
UBE2A-209ENST00000629303 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
UBE2A-209ENST00000629303 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
UBE2A-209ENST00000629303 COL22A1Q8NFW1 1626 aaPredicted RBP16.36■□□□□ 0.21
UBE2A-209ENST00000629303 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
UBE2A-209ENST00000629303 FOXD1Q16676 465 aa16.35■□□□□ 0.21
UBE2A-209ENST00000629303 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
UBE2A-209ENST00000629303 PXDNQ92626 1479 aa16.34■□□□□ 0.21
UBE2A-209ENST00000629303 MYOM2P54296 1465 aa16.33■□□□□ 0.2
UBE2A-209ENST00000629303 RXRBP28702 533 aa16.32■□□□□ 0.2
UBE2A-209ENST00000629303 SPATA31E1Q6ZUB1 1445 aa16.31■□□□□ 0.2
UBE2A-209ENST00000629303 SOS2Q07890 1332 aaPredicted RBP16.31■□□□□ 0.2
UBE2A-209ENST00000629303 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
UBE2A-209ENST00000629303 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms