RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 KIF1BO60333 1816 aa11.45□□□□□ -0.58
NR1I3-235ENST00000628566 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
NR1I3-235ENST00000628566 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
NR1I3-235ENST00000628566 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
NR1I3-235ENST00000628566 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
NR1I3-235ENST00000628566 LTKP29376 864 aa11.42□□□□□ -0.58
NR1I3-235ENST00000628566 RPGRIP1LQ68CZ1 1315 aa11.41□□□□□ -0.58
NR1I3-235ENST00000628566 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
NR1I3-235ENST00000628566 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
NR1I3-235ENST00000628566 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
NR1I3-235ENST00000628566 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-235ENST00000628566 CPS1P31327 1500 aa11.39□□□□□ -0.59
NR1I3-235ENST00000628566 ZNF335Q9H4Z2 1342 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-235ENST00000628566 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
NR1I3-235ENST00000628566 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
NR1I3-235ENST00000628566 IQSEC2Q5JU85 1478 aa11.37□□□□□ -0.59
NR1I3-235ENST00000628566 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
NR1I3-235ENST00000628566 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-235ENST00000628566 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
NR1I3-235ENST00000628566 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
NR1I3-235ENST00000628566 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
NR1I3-235ENST00000628566 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
NR1I3-235ENST00000628566 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
NR1I3-235ENST00000628566 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
NR1I3-235ENST00000628566 KCNA6P17658 529 aa11.34□□□□□ -0.59
NR1I3-235ENST00000628566 LTBP4Q8N2S1 1624 aa11.34□□□□□ -0.59
NR1I3-235ENST00000628566 SPATA31E1Q6ZUB1 1445 aa11.34□□□□□ -0.59
NR1I3-235ENST00000628566 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
NR1I3-235ENST00000628566 PPLO60437 1756 aa11.32□□□□□ -0.6
NR1I3-235ENST00000628566 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
NR1I3-235ENST00000628566 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
NR1I3-235ENST00000628566 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
NR1I3-235ENST00000628566 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
NR1I3-235ENST00000628566 TOM1O60784 492 aa11.29□□□□□ -0.6
NR1I3-235ENST00000628566 PROSER2Q86WR7 435 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-235ENST00000628566 NWD1Q149M9 1564 aa11.28□□□□□ -0.6
NR1I3-235ENST00000628566 MYOM2P54296 1465 aa11.28□□□□□ -0.6
NR1I3-235ENST00000628566 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
NR1I3-235ENST00000628566 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
NR1I3-235ENST00000628566 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
NR1I3-235ENST00000628566 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
NR1I3-235ENST00000628566 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.61
NR1I3-235ENST00000628566 C14orf37Q86TY3 774 aa11.27□□□□□ -0.61
NR1I3-235ENST00000628566 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
NR1I3-235ENST00000628566 AMOTL2Q9Y2J4 779 aa11.27□□□□□ -0.61
NR1I3-235ENST00000628566 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 LAMC1P11047 1609 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 MSH6P52701 1360 aa11.26□□□□□ -0.61
NR1I3-235ENST00000628566 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
NR1I3-235ENST00000628566 STRCP1A6NGW2 1772 aa11.25□□□□□ -0.61
NR1I3-235ENST00000628566 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
NR1I3-235ENST00000628566 PIK3C2GO75747 1445 aa11.25□□□□□ -0.61
NR1I3-235ENST00000628566 MSH5O43196 834 aa11.24□□□□□ -0.61
NR1I3-235ENST00000628566 NEUROD1Q13562 356 aa11.24□□□□□ -0.61
NR1I3-235ENST00000628566 METP08581 1390 aa11.24□□□□□ -0.61
NR1I3-235ENST00000628566 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
NR1I3-235ENST00000628566 NRXN1Q9ULB1 1477 aa11.23□□□□□ -0.61
NR1I3-235ENST00000628566 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
NR1I3-235ENST00000628566 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
NR1I3-235ENST00000628566 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 TONSLQ96HA7 1378 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 ATF3P18847 181 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-235ENST00000628566 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.61
NR1I3-235ENST00000628566 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
NR1I3-235ENST00000628566 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
NR1I3-235ENST00000628566 CFAP70Q5T0N1 1121 aa11.2□□□□□ -0.62
NR1I3-235ENST00000628566 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
NR1I3-235ENST00000628566 PRAG1Q86YV5 1406 aa11.19□□□□□ -0.62
NR1I3-235ENST00000628566 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
NR1I3-235ENST00000628566 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-235ENST00000628566 SIN3AQ96ST3 1273 aa11.19□□□□□ -0.62
NR1I3-235ENST00000628566 STK26Q9P289 416 aa11.19□□□□□ -0.62
NR1I3-235ENST00000628566 DCCP43146 1447 aa11.18□□□□□ -0.62
NR1I3-235ENST00000628566 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
NR1I3-235ENST00000628566 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
NR1I3-235ENST00000628566 RBM33Q96EV2 1170 aaKnown RBP11.18□□□□□ -0.62
NR1I3-235ENST00000628566 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
NR1I3-235ENST00000628566 TMEM132EQ6IEE7 984 aa11.17□□□□□ -0.62
NR1I3-235ENST00000628566 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-235ENST00000628566 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
NR1I3-235ENST00000628566 SIRT1Q96EB6 747 aa11.17□□□□□ -0.62
NR1I3-235ENST00000628566 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
NR1I3-235ENST00000628566 TECPR2O15040 1411 aa11.17□□□□□ -0.62
NR1I3-235ENST00000628566 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
NR1I3-235ENST00000628566 POGKQ9P215 609 aa11.16□□□□□ -0.62
NR1I3-235ENST00000628566 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
NR1I3-235ENST00000628566 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
NR1I3-235ENST00000628566 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
NR1I3-235ENST00000628566 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
NR1I3-235ENST00000628566 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
NR1I3-235ENST00000628566 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-235ENST00000628566 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
NR1I3-235ENST00000628566 DLC1Q96QB1 1528 aa11.14□□□□□ -0.63
NR1I3-235ENST00000628566 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms