RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 P3H3Q8IVL6 736 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 MYRIPQ8NFW9 859 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 EXOC6Q8TAG9 804 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 PUS7Q96PZ0 661 aaKnown RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 PSMD1Q99460 953 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 FEZ1Q99689 392 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 NCAPGQ9BPX3 1015 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 TRIM34Q9BYJ4 488 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 PRKRIP1Q9H875 184 aaPredicted RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 RBM28Q9NW13 759 aaKnown RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 RAI14Q9P0K7 980 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 ZKSCAN5Q9Y2L8 839 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 CEP83Q9Y592 693 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 THOC2Q8NI27 1593 aaKnown RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 RAD50Q92878 1312 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 CCDC18Q5T9S5 1454 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 KIF14Q15058 1648 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 LRPPRCP42704 1394 aaKnown RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 CCDC7Q96M83 1385 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 TTC36A6NLP5 189 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 KIF1CO43896 1103 aaKnown RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 PLXNC1O60486 1568 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 NPM1P06748 294 aaKnown RBP eCLIP2.38□□□□□ -2.03
TCF4-264ENST00000628391 UBTFP17480 764 aaKnown RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 CALRP27797 417 aaKnown RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 SSR1P43307 286 aaKnown RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 NASPP49321 788 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 BRPF1P55201 1214 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 CBX1P83916 185 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 LMOD3Q0VAK6 560 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 ATP2B3Q16720 1220 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 TMEM132AQ24JP5 1023 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 SKOR2Q2VWA4 1001 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 NBPF6Q5VWK0 638 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 MROH2BQ7Z745 1585 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 NBPF5PQ86XG9 351 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 FAM9BQ8IZU0 186 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 BANK1Q8NDB2 785 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 ZNF592Q92610 1267 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 NBPF4Q96M43 638 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 MIA2Q96PC5 1412 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 UACAQ9BZF9 1416 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 BSDC1Q9NW68 430 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 CHMP5Q9NZZ3 219 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 CCDC39Q9UFE4 941 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 POLA1P09884 1462 aaPredicted RBP2.38□□□□□ -2.03
TCF4-264ENST00000628391 MAPK8IP3Q9UPT6 1336 aa2.38□□□□□ -2.03
TCF4-264ENST00000628391 CUX1P39880 1505 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 RUSC2Q8N2Y8 1516 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.37□□□□□ -2.03
TCF4-264ENST00000628391 NPC1L1Q9UHC9 1359 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 RTEL1-TNFRSF6BF6WH68 1400 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 BLMP54132 1417 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 CCDC172P0C7W6 258 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 CAPN2P17655 700 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 GTF2A1P52655 376 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 XPCQ01831 940 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 MAP2K1Q02750 393 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 KIAA2012Q0VF49 1180 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 PDE3BQ13370 1112 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 SYCP1Q15431 976 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 NBPF10Q6P3W6 841 aaKnown RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 FAM43BQ6ZT52 329 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 CERS3Q8IU89 383 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 ZNF710Q8N1W2 664 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 PDCL2Q8N4E4 241 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 MNS1Q8NEH6 495 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 SIRT1Q96EB6 747 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 PDLIM2Q96JY6 352 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 GBP4Q96PP9 640 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 GZF1Q9H116 711 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 SLKQ9H2G2 1235 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 UPF2Q9HAU5 1272 aaKnown RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 SMC4Q9NTJ3 1288 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 OGFRQ9NZT2 677 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 FEZ2Q9UHY8 353 aaPredicted RBP2.37□□□□□ -2.03
TCF4-264ENST00000628391 RCAN3Q9UKA8 241 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 RAPGEF2Q9Y4G8 1499 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 USP19O94966 1318 aa2.37□□□□□ -2.03
TCF4-264ENST00000628391 HFM1A2PYH4 1435 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 BIVM-ERCC5R4GMW8 1640 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 GOLIM4O00461 696 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 KIF3CO14782 793 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 MAFGO15525 162 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 GUCY2CP25092 1073 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 TNNT3P45378 269 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 ZNF445P59923 1031 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 ANAPC15P60006 121 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 CHAF1AQ13111 956 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 SEMA3FQ13275 785 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 ZKSCAN8Q15776 578 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 CCDC184Q52MB2 194 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 MUM1L1Q5H9M0 696 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 CT47A1Q5JQC4 288 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 ICE2Q659A1 982 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 CC2D2BQ6DHV5 1058 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.36□□□□□ -2.03
TCF4-264ENST00000628391 OTUD6BQ8N6M0 293 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 GPATCH11Q8N954 259 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 ANKRD7Q92527 254 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms