RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 PIP4K2BP78356 416 aa20.83■□□□□ 0.93
SOX2-OT-242ENST00000627501 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
SOX2-OT-242ENST00000627501 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
SOX2-OT-242ENST00000627501 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
SOX2-OT-242ENST00000627501 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
SOX2-OT-242ENST00000627501 BCANQ96GW7 911 aa20.79■□□□□ 0.92
SOX2-OT-242ENST00000627501 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
SOX2-OT-242ENST00000627501 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
SOX2-OT-242ENST00000627501 FOXD1Q16676 465 aa20.75■□□□□ 0.91
SOX2-OT-242ENST00000627501 HSPA1LP34931 641 aa20.74■□□□□ 0.91
SOX2-OT-242ENST00000627501 TMEM94Q12767 1356 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 ADAMTS13Q76LX8 1427 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 TOM1O60784 492 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 KCNA6P17658 529 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
SOX2-OT-242ENST00000627501 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
SOX2-OT-242ENST00000627501 TRPM2O94759 1503 aa20.71■□□□□ 0.91
SOX2-OT-242ENST00000627501 NWD1Q149M9 1564 aa20.69■□□□□ 0.9
SOX2-OT-242ENST00000627501 PROSER2Q86WR7 435 aaPredicted RBP20.69■□□□□ 0.9
SOX2-OT-242ENST00000627501 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
SOX2-OT-242ENST00000627501 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
SOX2-OT-242ENST00000627501 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
SOX2-OT-242ENST00000627501 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
SOX2-OT-242ENST00000627501 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
SOX2-OT-242ENST00000627501 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
SOX2-OT-242ENST00000627501 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
SOX2-OT-242ENST00000627501 PTPRUQ92729 1446 aa20.64■□□□□ 0.89
SOX2-OT-242ENST00000627501 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
SOX2-OT-242ENST00000627501 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
SOX2-OT-242ENST00000627501 MPHOSPH9Q99550 1183 aa20.6■□□□□ 0.89
SOX2-OT-242ENST00000627501 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
SOX2-OT-242ENST00000627501 METP08581 1390 aa20.59■□□□□ 0.89
SOX2-OT-242ENST00000627501 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
SOX2-OT-242ENST00000627501 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
SOX2-OT-242ENST00000627501 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.88
SOX2-OT-242ENST00000627501 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
SOX2-OT-242ENST00000627501 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
SOX2-OT-242ENST00000627501 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
SOX2-OT-242ENST00000627501 MSH6P52701 1360 aa20.54■□□□□ 0.88
SOX2-OT-242ENST00000627501 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
SOX2-OT-242ENST00000627501 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
SOX2-OT-242ENST00000627501 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
SOX2-OT-242ENST00000627501 FAM135BQ49AJ0 1406 aa20.51■□□□□ 0.87
SOX2-OT-242ENST00000627501 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
SOX2-OT-242ENST00000627501 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
SOX2-OT-242ENST00000627501 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
SOX2-OT-242ENST00000627501 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
SOX2-OT-242ENST00000627501 KIF1BO60333 1816 aa20.49■□□□□ 0.87
SOX2-OT-242ENST00000627501 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SOX2-OT-242ENST00000627501 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
SOX2-OT-242ENST00000627501 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
SOX2-OT-242ENST00000627501 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
SOX2-OT-242ENST00000627501 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
SOX2-OT-242ENST00000627501 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
SOX2-OT-242ENST00000627501 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
SOX2-OT-242ENST00000627501 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
SOX2-OT-242ENST00000627501 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
SOX2-OT-242ENST00000627501 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
SOX2-OT-242ENST00000627501 PPLO60437 1756 aa20.42■□□□□ 0.86
SOX2-OT-242ENST00000627501 ATF3P18847 181 aa20.39■□□□□ 0.85
SOX2-OT-242ENST00000627501 CADPS2Q86UW7 1296 aa20.38■□□□□ 0.85
SOX2-OT-242ENST00000627501 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
SOX2-OT-242ENST00000627501 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
SOX2-OT-242ENST00000627501 MST1RQ04912 1400 aa20.36■□□□□ 0.85
SOX2-OT-242ENST00000627501 ANKRD30BQ9BXX2 1392 aa20.36■□□□□ 0.85
SOX2-OT-242ENST00000627501 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
SOX2-OT-242ENST00000627501 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
SOX2-OT-242ENST00000627501 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
SOX2-OT-242ENST00000627501 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
SOX2-OT-242ENST00000627501 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
SOX2-OT-242ENST00000627501 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
SOX2-OT-242ENST00000627501 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
SOX2-OT-242ENST00000627501 STK26Q9P289 416 aa20.34■□□□□ 0.85
SOX2-OT-242ENST00000627501 DCCP43146 1447 aa20.34■□□□□ 0.85
SOX2-OT-242ENST00000627501 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
SOX2-OT-242ENST00000627501 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
SOX2-OT-242ENST00000627501 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
SOX2-OT-242ENST00000627501 RGS17Q9UGC6 210 aaPredicted RBP20.31■□□□□ 0.84
SOX2-OT-242ENST00000627501 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
SOX2-OT-242ENST00000627501 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
SOX2-OT-242ENST00000627501 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
SOX2-OT-242ENST00000627501 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
SOX2-OT-242ENST00000627501 AHDC1Q5TGY3 1603 aaPredicted RBP20.28■□□□□ 0.84
SOX2-OT-242ENST00000627501 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
SOX2-OT-242ENST00000627501 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
SOX2-OT-242ENST00000627501 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
SOX2-OT-242ENST00000627501 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
SOX2-OT-242ENST00000627501 MYOM2P54296 1465 aa20.26■□□□□ 0.83
SOX2-OT-242ENST00000627501 JCADQ9P266 1359 aa20.26■□□□□ 0.83
SOX2-OT-242ENST00000627501 HRCP23327 699 aa20.26■□□□□ 0.83
SOX2-OT-242ENST00000627501 ORAI2Q96SN7 254 aa20.26■□□□□ 0.83
SOX2-OT-242ENST00000627501 LRP6O75581 1613 aa20.25■□□□□ 0.83
SOX2-OT-242ENST00000627501 SOCS7O14512 581 aa20.25■□□□□ 0.83
SOX2-OT-242ENST00000627501 TECPR2O15040 1411 aa20.25■□□□□ 0.83
SOX2-OT-242ENST00000627501 C14orf93Q9H972 538 aaKnown RBP20.24■□□□□ 0.83
SOX2-OT-242ENST00000627501 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
SOX2-OT-242ENST00000627501 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
SOX2-OT-242ENST00000627501 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
SOX2-OT-242ENST00000627501 ABCC11Q96J66 1382 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms