RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
CNOT9-209ENST00000627282 LTKP29376 864 aa27.9■■■□□ 2.06
CNOT9-209ENST00000627282 TXNDC2Q86VQ3 553 aa27.89■■■□□ 2.06
CNOT9-209ENST00000627282 EID1Q9Y6B2 187 aa27.89■■■□□ 2.05
CNOT9-209ENST00000627282 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
CNOT9-209ENST00000627282 IQSEC2Q5JU85 1478 aa27.85■■■□□ 2.05
CNOT9-209ENST00000627282 TMEM131LA2VDJ0 1609 aa27.84■■■□□ 2.05
CNOT9-209ENST00000627282 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
CNOT9-209ENST00000627282 CLSPNQ9HAW4 1339 aa27.8■■■□□ 2.04
CNOT9-209ENST00000627282 MYO5BQ9ULV0 1848 aa27.8■■■□□ 2.04
CNOT9-209ENST00000627282 CPS1P31327 1500 aa27.79■■■□□ 2.04
CNOT9-209ENST00000627282 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
CNOT9-209ENST00000627282 KIF1BO60333 1816 aa27.78■■■□□ 2.04
CNOT9-209ENST00000627282 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
CNOT9-209ENST00000627282 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
CNOT9-209ENST00000627282 HDGFP51858 240 aaKnown RBP27.71■■■□□ 2.03
CNOT9-209ENST00000627282 SIN3AQ96ST3 1273 aa27.71■■■□□ 2.03
CNOT9-209ENST00000627282 STRCP1A6NGW2 1772 aa27.7■■■□□ 2.02
CNOT9-209ENST00000627282 PLEKHG1Q9ULL1 1385 aa27.68■■■□□ 2.02
CNOT9-209ENST00000627282 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
CNOT9-209ENST00000627282 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
CNOT9-209ENST00000627282 RGL3Q3MIN7 710 aa27.67■■■□□ 2.02
CNOT9-209ENST00000627282 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.67■■■□□ 2.02
CNOT9-209ENST00000627282 SLC26A8Q96RN1 970 aa27.66■■■□□ 2.02
CNOT9-209ENST00000627282 NEXMIFQ5QGS0 1516 aa27.65■■■□□ 2.02
CNOT9-209ENST00000627282 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
CNOT9-209ENST00000627282 NEUROD1Q13562 356 aa27.63■■■□□ 2.01
CNOT9-209ENST00000627282 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
CNOT9-209ENST00000627282 BCANQ96GW7 911 aa27.63■■■□□ 2.01
CNOT9-209ENST00000627282 UBAP1LF5GYI3 381 aa27.61■■■□□ 2.01
CNOT9-209ENST00000627282 RPGRIP1LQ68CZ1 1315 aa27.61■■■□□ 2.01
CNOT9-209ENST00000627282 SENP3Q9H4L4 574 aaPredicted RBP27.59■■■□□ 2.01
CNOT9-209ENST00000627282 PPLO60437 1756 aa27.58■■■□□ 2.01
CNOT9-209ENST00000627282 KCNA6P17658 529 aa27.57■■■□□ 2
CNOT9-209ENST00000627282 IFT172Q9UG01 1749 aa27.56■■■□□ 2
CNOT9-209ENST00000627282 ADAMTS13Q76LX8 1427 aa27.55■■■□□ 2
CNOT9-209ENST00000627282 TBX22Q9Y458 520 aa27.55■■■□□ 2
CNOT9-209ENST00000627282 NWD1Q149M9 1564 aa27.55■■■□□ 2
CNOT9-209ENST00000627282 DIP2AQ14689 1571 aa27.54■■■□□ 2
CNOT9-209ENST00000627282 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
CNOT9-209ENST00000627282 NKTRP30414 1462 aaKnown RBP27.52■■■□□ 2
CNOT9-209ENST00000627282 ADGRF5Q8IZF2 1346 aa27.51■■□□□ 1.99
CNOT9-209ENST00000627282 DCAF11Q8TEB1 546 aa27.51■■□□□ 1.99
CNOT9-209ENST00000627282 TOM1O60784 492 aa27.5■■□□□ 1.99
CNOT9-209ENST00000627282 L3MBTL2Q969R5 705 aa27.5■■□□□ 1.99
CNOT9-209ENST00000627282 SETBP1Q9Y6X0 1596 aa27.49■■□□□ 1.99
CNOT9-209ENST00000627282 MYOM2P54296 1465 aa27.49■■□□□ 1.99
CNOT9-209ENST00000627282 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
CNOT9-209ENST00000627282 XIRP1Q702N8 1843 aaKnown RBP27.48■■□□□ 1.99
CNOT9-209ENST00000627282 ALKQ9UM73 1620 aa27.48■■□□□ 1.99
CNOT9-209ENST00000627282 NRXN3Q9Y4C0 1643 aa27.48■■□□□ 1.99
CNOT9-209ENST00000627282 KDM2AQ9Y2K7 1162 aa27.47■■□□□ 1.99
CNOT9-209ENST00000627282 TMEM94Q12767 1356 aa27.47■■□□□ 1.99
CNOT9-209ENST00000627282 PIK3R4Q99570 1358 aa27.47■■□□□ 1.99
CNOT9-209ENST00000627282 NRXN1Q9ULB1 1477 aa27.46■■□□□ 1.99
CNOT9-209ENST00000627282 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.99
CNOT9-209ENST00000627282 TONSLQ96HA7 1378 aa27.44■■□□□ 1.98
CNOT9-209ENST00000627282 PIK3C2GO75747 1445 aa27.43■■□□□ 1.98
CNOT9-209ENST00000627282 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
CNOT9-209ENST00000627282 PIP4K2BP78356 416 aa27.41■■□□□ 1.98
CNOT9-209ENST00000627282 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
CNOT9-209ENST00000627282 RBM33Q96EV2 1170 aaKnown RBP27.38■■□□□ 1.97
CNOT9-209ENST00000627282 PTPRUQ92729 1446 aa27.37■■□□□ 1.97
CNOT9-209ENST00000627282 PRAG1Q86YV5 1406 aa27.36■■□□□ 1.97
CNOT9-209ENST00000627282 METP08581 1390 aa27.35■■□□□ 1.97
CNOT9-209ENST00000627282 SETD1AO15047 1707 aaKnown RBP27.34■■□□□ 1.97
CNOT9-209ENST00000627282 AMOTL2Q9Y2J4 779 aa27.34■■□□□ 1.97
CNOT9-209ENST00000627282 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
CNOT9-209ENST00000627282 TIMELESSQ9UNS1 1208 aa27.33■■□□□ 1.97
CNOT9-209ENST00000627282 NCOA3Q9Y6Q9 1424 aa27.32■■□□□ 1.96
CNOT9-209ENST00000627282 CFAP70Q5T0N1 1121 aa27.32■■□□□ 1.96
CNOT9-209ENST00000627282 C14orf93Q9H972 538 aaKnown RBP27.32■■□□□ 1.96
CNOT9-209ENST00000627282 MSH6P52701 1360 aa27.31■■□□□ 1.96
CNOT9-209ENST00000627282 ZNF316A6NFI3 1004 aaPredicted RBP27.3■■□□□ 1.96
CNOT9-209ENST00000627282 ASXL1Q8IXJ9 1541 aa27.28■■□□□ 1.96
CNOT9-209ENST00000627282 HSPA1LP34931 641 aa27.28■■□□□ 1.96
CNOT9-209ENST00000627282 NBPF8Q3BBV2 869 aa27.28■■□□□ 1.96
CNOT9-209ENST00000627282 LAMC1P11047 1609 aa27.27■■□□□ 1.96
CNOT9-209ENST00000627282 TMEM132EQ6IEE7 984 aa27.24■■□□□ 1.95
CNOT9-209ENST00000627282 C14orf37Q86TY3 774 aa27.23■■□□□ 1.95
CNOT9-209ENST00000627282 ADGRB1O14514 1584 aa27.23■■□□□ 1.95
CNOT9-209ENST00000627282 FAM135BQ49AJ0 1406 aa27.22■■□□□ 1.95
CNOT9-209ENST00000627282 KIAA1210Q9ULL0 1709 aa27.22■■□□□ 1.95
CNOT9-209ENST00000627282 NBPF1Q3BBV0 1214 aa27.21■■□□□ 1.95
CNOT9-209ENST00000627282 C19orf44Q9H6X5 657 aa27.21■■□□□ 1.95
CNOT9-209ENST00000627282 TRPM1Q7Z4N2 1603 aa27.2■■□□□ 1.94
CNOT9-209ENST00000627282 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
CNOT9-209ENST00000627282 PTCH1Q13635 1447 aa27.18■■□□□ 1.94
CNOT9-209ENST00000627282 SLAIN2Q9P270 581 aa27.18■■□□□ 1.94
CNOT9-209ENST00000627282 YTHDC2Q9H6S0 1430 aaKnown RBP27.17■■□□□ 1.94
CNOT9-209ENST00000627282 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
CNOT9-209ENST00000627282 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
CNOT9-209ENST00000627282 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
CNOT9-209ENST00000627282 STK26Q9P289 416 aa27.15■■□□□ 1.94
CNOT9-209ENST00000627282 DCCP43146 1447 aa27.15■■□□□ 1.94
CNOT9-209ENST00000627282 RALGAPBQ86X10 1494 aa27.14■■□□□ 1.94
CNOT9-209ENST00000627282 ATF3P18847 181 aa27.14■■□□□ 1.94
CNOT9-209ENST00000627282 ROBO2Q9HCK4 1378 aa27.14■■□□□ 1.93
CNOT9-209ENST00000627282 ABCC11Q96J66 1382 aa27.13■■□□□ 1.93
CNOT9-209ENST00000627282 TECPR2O15040 1411 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms