RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 GCC2Q8IWJ2 1684 aa38.78■■■■□ 3.8
R3HDM4-208ENST00000626716 UNC13BO14795 1591 aa38.78■■■■□ 3.8
R3HDM4-208ENST00000626716 MYO5BQ9ULV0 1848 aa38.76■■■■□ 3.8
R3HDM4-208ENST00000626716 ZFYVE9O95405 1425 aa38.74■■■■□ 3.79
R3HDM4-208ENST00000626716 FAM135BQ49AJ0 1406 aa38.74■■■■□ 3.79
R3HDM4-208ENST00000626716 RBM33Q96EV2 1170 aaKnown RBP38.73■■■■□ 3.79
R3HDM4-208ENST00000626716 RIMS2Q9UQ26 1411 aa38.72■■■■□ 3.79
R3HDM4-208ENST00000626716 PPP1R15AO75807 674 aaPredicted RBP38.72■■■■□ 3.79
R3HDM4-208ENST00000626716 PLEKHG1Q9ULL1 1385 aa38.71■■■■□ 3.79
R3HDM4-208ENST00000626716 TMEM131LA2VDJ0 1609 aa38.71■■■■□ 3.79
R3HDM4-208ENST00000626716 CHGAP10645 457 aaKnown RBP38.69■■■■□ 3.78
R3HDM4-208ENST00000626716 ITGAEP38570 1179 aa38.69■■■■□ 3.78
R3HDM4-208ENST00000626716 NKTRP30414 1462 aaKnown RBP38.68■■■■□ 3.78
R3HDM4-208ENST00000626716 E9PCH4 1651 aa38.68■■■■□ 3.78
R3HDM4-208ENST00000626716 NWD1Q149M9 1564 aa38.67■■■■□ 3.78
R3HDM4-208ENST00000626716 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.67■■■■□ 3.78
R3HDM4-208ENST00000626716 PPARGC1BQ86YN6 1023 aaKnown RBP38.65■■■■□ 3.78
R3HDM4-208ENST00000626716 NUP155O75694 1391 aa38.65■■■■□ 3.78
R3HDM4-208ENST00000626716 IQGAP3Q86VI3 1631 aa38.64■■■■□ 3.78
R3HDM4-208ENST00000626716 TBX22Q9Y458 520 aa38.64■■■■□ 3.78
R3HDM4-208ENST00000626716 CHD2O14647 1828 aaKnown RBP38.62■■■■□ 3.77
R3HDM4-208ENST00000626716 MSH6P52701 1360 aa38.6■■■■□ 3.77
R3HDM4-208ENST00000626716 ROBO1Q9Y6N7 1651 aa38.56■■■■□ 3.76
R3HDM4-208ENST00000626716 NUTM2DQ5VT03 806 aaPredicted RBP38.56■■■■□ 3.76
R3HDM4-208ENST00000626716 SLAIN2Q9P270 581 aa38.54■■■■□ 3.76
R3HDM4-208ENST00000626716 ADAMTS13Q76LX8 1427 aa38.49■■■■□ 3.75
R3HDM4-208ENST00000626716 RGS17Q9UGC6 210 aaPredicted RBP38.48■■■■□ 3.75
R3HDM4-208ENST00000626716 NCOA3Q9Y6Q9 1424 aa38.46■■■■□ 3.75
R3HDM4-208ENST00000626716 PIK3R4Q99570 1358 aa38.44■■■■□ 3.74
R3HDM4-208ENST00000626716 DIP2AQ14689 1571 aa38.44■■■■□ 3.74
R3HDM4-208ENST00000626716 C14orf37Q86TY3 774 aa38.42■■■■□ 3.74
R3HDM4-208ENST00000626716 C19orf44Q9H6X5 657 aa38.37■■■■□ 3.73
R3HDM4-208ENST00000626716 AMOTL2Q9Y2J4 779 aa38.36■■■■□ 3.73
R3HDM4-208ENST00000626716 PHLPP1O60346 1717 aa38.35■■■■□ 3.73
R3HDM4-208ENST00000626716 SPHKAPQ2M3C7 1700 aa38.35■■■■□ 3.73
R3HDM4-208ENST00000626716 TRPM2O94759 1503 aa38.33■■■■□ 3.73
R3HDM4-208ENST00000626716 CADPS2Q86UW7 1296 aa38.33■■■■□ 3.73
R3HDM4-208ENST00000626716 ATF3P18847 181 aa38.32■■■■□ 3.72
R3HDM4-208ENST00000626716 ZNF326Q5BKZ1 582 aaKnown RBP38.32■■■■□ 3.72
R3HDM4-208ENST00000626716 RRBP1Q9P2E9 1410 aaKnown RBP38.3■■■■□ 3.72
R3HDM4-208ENST00000626716 PTPRUQ92729 1446 aa38.29■■■■□ 3.72
R3HDM4-208ENST00000626716 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.29■■■■□ 3.72
R3HDM4-208ENST00000626716 JCADQ9P266 1359 aa38.29■■■■□ 3.72
R3HDM4-208ENST00000626716 POTEAQ6S8J7 498 aa38.26■■■■□ 3.72
R3HDM4-208ENST00000626716 NAIPQ13075 1403 aa38.24■■■■□ 3.71
R3HDM4-208ENST00000626716 SETBP1Q9Y6X0 1596 aa38.23■■■■□ 3.71
R3HDM4-208ENST00000626716 NRXN3Q9Y4C0 1643 aa38.22■■■■□ 3.71
R3HDM4-208ENST00000626716 COL16A1Q07092 1604 aaPredicted RBP38.2■■■■□ 3.7
R3HDM4-208ENST00000626716 CLTCL1P53675 1640 aa38.16■■■■□ 3.7
R3HDM4-208ENST00000626716 METP08581 1390 aa38.16■■■■□ 3.7
R3HDM4-208ENST00000626716 XRN1Q8IZH2 1706 aaKnown RBP38.14■■■■□ 3.7
R3HDM4-208ENST00000626716 TRIM52Q96A61 297 aa38.13■■■■□ 3.69
R3HDM4-208ENST00000626716 BRINP3Q76B58 766 aa38.12■■■■□ 3.69
R3HDM4-208ENST00000626716 KIF1BO60333 1816 aa38.12■■■■□ 3.69
R3HDM4-208ENST00000626716 AHDC1Q5TGY3 1603 aaPredicted RBP38.12■■■■□ 3.69
R3HDM4-208ENST00000626716 DCCP43146 1447 aa38.12■■■■□ 3.69
R3HDM4-208ENST00000626716 SPATA31A6Q5VVP1 1343 aa38.12■■■■□ 3.69
R3HDM4-208ENST00000626716 NEXMIFQ5QGS0 1516 aa38.11■■■■□ 3.69
R3HDM4-208ENST00000626716 HFM1A2PYH4 1435 aa38.06■■■■□ 3.68
R3HDM4-208ENST00000626716 VGFO15240 615 aaPredicted RBP38.03■■■■□ 3.68
R3HDM4-208ENST00000626716 SLC4A1APQ9BWU0 796 aaKnown RBP38.03■■■■□ 3.68
R3HDM4-208ENST00000626716 MEX3CQ5U5Q3 659 aaKnown RBP38.02■■■■□ 3.68
R3HDM4-208ENST00000626716 MST1RQ04912 1400 aa38■■■■□ 3.67
R3HDM4-208ENST00000626716 LRP6O75581 1613 aa38■■■■□ 3.67
R3HDM4-208ENST00000626716 SHPRHQ149N8 1683 aa38■■■■□ 3.67
R3HDM4-208ENST00000626716 ASXL1Q8IXJ9 1541 aa37.97■■■■□ 3.67
R3HDM4-208ENST00000626716 ADGRL3Q9HAR2 1447 aa37.96■■■■□ 3.67
R3HDM4-208ENST00000626716 RPGRIP1LQ68CZ1 1315 aa37.96■■■■□ 3.67
R3HDM4-208ENST00000626716 ZNF772Q68DY9 489 aaPredicted RBP37.94■■■■□ 3.66
R3HDM4-208ENST00000626716 SETD5Q9C0A6 1442 aa37.9■■■■□ 3.66
R3HDM4-208ENST00000626716 NUTM2BA6NNL0 878 aaPredicted RBP37.89■■■■□ 3.66
R3HDM4-208ENST00000626716 NUTM2EB1AL46 878 aaPredicted RBP37.89■■■■□ 3.66
R3HDM4-208ENST00000626716 NUTM2AQ8IVF1 878 aaPredicted RBP37.89■■■■□ 3.66
R3HDM4-208ENST00000626716 LRRC59Q96AG4 307 aaKnown RBP37.89■■■■□ 3.66
R3HDM4-208ENST00000626716 NALCNQ8IZF0 1738 aa37.88■■■■□ 3.65
R3HDM4-208ENST00000626716 NHSL1Q5SYE7 1610 aa37.87■■■■□ 3.65
R3HDM4-208ENST00000626716 SETD1AO15047 1707 aaKnown RBP37.85■■■■□ 3.65
R3HDM4-208ENST00000626716 PTCH1Q13635 1447 aa37.85■■■■□ 3.65
R3HDM4-208ENST00000626716 FOXD1Q16676 465 aa37.84■■■■□ 3.65
R3HDM4-208ENST00000626716 DDX17Q92841 729 aaKnown RBP37.84■■■■□ 3.65
R3HDM4-208ENST00000626716 ROBO2Q9HCK4 1378 aa37.83■■■■□ 3.65
R3HDM4-208ENST00000626716 PPLO60437 1756 aa37.81■■■■□ 3.64
R3HDM4-208ENST00000626716 C1orf167Q5SNV9 1468 aa37.79■■■■□ 3.64
R3HDM4-208ENST00000626716 PRAG1Q86YV5 1406 aa37.76■■■■□ 3.63
R3HDM4-208ENST00000626716 RXRBP28702 533 aa37.75■■■■□ 3.63
R3HDM4-208ENST00000626716 PNPLA6Q8IY17 1366 aa37.73■■■■□ 3.63
R3HDM4-208ENST00000626716 MPHOSPH9Q99550 1183 aa37.73■■■■□ 3.63
R3HDM4-208ENST00000626716 CCDC144AA2RUR9 1427 aa37.72■■■■□ 3.63
R3HDM4-208ENST00000626716 AFF2P51816 1311 aa37.72■■■■□ 3.63
R3HDM4-208ENST00000626716 ORAI2Q96SN7 254 aa37.72■■■■□ 3.63
R3HDM4-208ENST00000626716 RGL3Q3MIN7 710 aa37.71■■■■□ 3.63
R3HDM4-208ENST00000626716 ADGRF5Q8IZF2 1346 aa37.69■■■■□ 3.62
R3HDM4-208ENST00000626716 C8orf37Q96NL8 207 aa37.66■■■■□ 3.62
R3HDM4-208ENST00000626716 LAMC1P11047 1609 aa37.65■■■■□ 3.62
R3HDM4-208ENST00000626716 SOS2Q07890 1332 aaPredicted RBP37.65■■■■□ 3.62
R3HDM4-208ENST00000626716 SPATA31E1Q6ZUB1 1445 aa37.64■■■■□ 3.62
R3HDM4-208ENST00000626716 ANKRD30BQ9BXX2 1392 aa37.63■■■■□ 3.61
R3HDM4-208ENST00000626716 UPF1Q92900 1129 aaKnown RBP eCLIP37.6■■■■□ 3.61
R3HDM4-208ENST00000626716 QTRT2Q9H974 415 aaKnown RBP37.59■■■■□ 3.61
R3HDM4-208ENST00000626716 STK26Q9P289 416 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms