RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
ATRX-208ENST00000622960 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
ATRX-208ENST00000622960 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
ATRX-208ENST00000622960 HFM1A2PYH4 1435 aa19.66■□□□□ 0.74
ATRX-208ENST00000622960 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
ATRX-208ENST00000622960 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
ATRX-208ENST00000622960 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
ATRX-208ENST00000622960 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
ATRX-208ENST00000622960 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
ATRX-208ENST00000622960 DISP3Q9P2K9 1392 aa19.6■□□□□ 0.73
ATRX-208ENST00000622960 KCNA6P17658 529 aa19.6■□□□□ 0.73
ATRX-208ENST00000622960 DIP2AQ14689 1571 aa19.59■□□□□ 0.73
ATRX-208ENST00000622960 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
ATRX-208ENST00000622960 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
ATRX-208ENST00000622960 TRPM2O94759 1503 aa19.57■□□□□ 0.72
ATRX-208ENST00000622960 PROSER2Q86WR7 435 aaPredicted RBP19.57■□□□□ 0.72
ATRX-208ENST00000622960 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
ATRX-208ENST00000622960 SLC4A1APQ9BWU0 796 aaKnown RBP19.55■□□□□ 0.72
ATRX-208ENST00000622960 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
ATRX-208ENST00000622960 KIF1BO60333 1816 aa19.54■□□□□ 0.72
ATRX-208ENST00000622960 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
ATRX-208ENST00000622960 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
ATRX-208ENST00000622960 SOCS7O14512 581 aa19.53■□□□□ 0.72
ATRX-208ENST00000622960 HSPA1LP34931 641 aa19.53■□□□□ 0.72
ATRX-208ENST00000622960 NUTM2DQ5VT03 806 aaPredicted RBP19.53■□□□□ 0.72
ATRX-208ENST00000622960 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.72
ATRX-208ENST00000622960 TBX22Q9Y458 520 aa19.52■□□□□ 0.72
ATRX-208ENST00000622960 MSH6P52701 1360 aa19.52■□□□□ 0.72
ATRX-208ENST00000622960 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
ATRX-208ENST00000622960 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
ATRX-208ENST00000622960 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
ATRX-208ENST00000622960 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
ATRX-208ENST00000622960 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
ATRX-208ENST00000622960 SETBP1Q9Y6X0 1596 aa19.47■□□□□ 0.71
ATRX-208ENST00000622960 NEXMIFQ5QGS0 1516 aa19.45■□□□□ 0.7
ATRX-208ENST00000622960 NCOA3Q9Y6Q9 1424 aa19.44■□□□□ 0.7
ATRX-208ENST00000622960 ILDR2Q71H61 639 aa19.44■□□□□ 0.7
ATRX-208ENST00000622960 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
ATRX-208ENST00000622960 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
ATRX-208ENST00000622960 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
ATRX-208ENST00000622960 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
ATRX-208ENST00000622960 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
ATRX-208ENST00000622960 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
ATRX-208ENST00000622960 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
ATRX-208ENST00000622960 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
ATRX-208ENST00000622960 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
ATRX-208ENST00000622960 RPGRIP1LQ68CZ1 1315 aa19.4■□□□□ 0.7
ATRX-208ENST00000622960 ATF3P18847 181 aa19.38■□□□□ 0.69
ATRX-208ENST00000622960 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
ATRX-208ENST00000622960 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
ATRX-208ENST00000622960 CADPS2Q86UW7 1296 aa19.37■□□□□ 0.69
ATRX-208ENST00000622960 MPHOSPH9Q99550 1183 aa19.37■□□□□ 0.69
ATRX-208ENST00000622960 SLAIN2Q9P270 581 aa19.36■□□□□ 0.69
ATRX-208ENST00000622960 PPLO60437 1756 aa19.35■□□□□ 0.69
ATRX-208ENST00000622960 FOXD1Q16676 465 aa19.35■□□□□ 0.69
ATRX-208ENST00000622960 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
ATRX-208ENST00000622960 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
ATRX-208ENST00000622960 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
ATRX-208ENST00000622960 DCCP43146 1447 aa19.33■□□□□ 0.68
ATRX-208ENST00000622960 METP08581 1390 aa19.32■□□□□ 0.68
ATRX-208ENST00000622960 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
ATRX-208ENST00000622960 PHLPP1O60346 1717 aa19.31■□□□□ 0.68
ATRX-208ENST00000622960 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
ATRX-208ENST00000622960 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
ATRX-208ENST00000622960 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
ATRX-208ENST00000622960 ADGRL3Q9HAR2 1447 aa19.26■□□□□ 0.67
ATRX-208ENST00000622960 SETD1AO15047 1707 aaKnown RBP19.26■□□□□ 0.67
ATRX-208ENST00000622960 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
ATRX-208ENST00000622960 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
ATRX-208ENST00000622960 NALCNQ8IZF0 1738 aa19.23■□□□□ 0.67
ATRX-208ENST00000622960 JCADQ9P266 1359 aa19.23■□□□□ 0.67
ATRX-208ENST00000622960 AHDC1Q5TGY3 1603 aaPredicted RBP19.22■□□□□ 0.67
ATRX-208ENST00000622960 COL16A1Q07092 1604 aaPredicted RBP19.21■□□□□ 0.67
ATRX-208ENST00000622960 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
ATRX-208ENST00000622960 ASXL1Q8IXJ9 1541 aa19.2■□□□□ 0.66
ATRX-208ENST00000622960 MST1RQ04912 1400 aa19.19■□□□□ 0.66
ATRX-208ENST00000622960 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
ATRX-208ENST00000622960 LAMC1P11047 1609 aa19.18■□□□□ 0.66
ATRX-208ENST00000622960 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
ATRX-208ENST00000622960 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
ATRX-208ENST00000622960 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
ATRX-208ENST00000622960 HRCP23327 699 aa19.17■□□□□ 0.66
ATRX-208ENST00000622960 MYOM2P54296 1465 aa19.16■□□□□ 0.66
ATRX-208ENST00000622960 SPATA31A6Q5VVP1 1343 aa19.15■□□□□ 0.66
ATRX-208ENST00000622960 SHPRHQ149N8 1683 aa19.14■□□□□ 0.66
ATRX-208ENST00000622960 MEX3CQ5U5Q3 659 aaKnown RBP19.14■□□□□ 0.65
ATRX-208ENST00000622960 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
ATRX-208ENST00000622960 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.65
ATRX-208ENST00000622960 STK26Q9P289 416 aa19.13■□□□□ 0.65
ATRX-208ENST00000622960 LRPPRCP42704 1394 aaKnown RBP19.13■□□□□ 0.65
ATRX-208ENST00000622960 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
ATRX-208ENST00000622960 TECPR2O15040 1411 aa19.12■□□□□ 0.65
ATRX-208ENST00000622960 C1orf167Q5SNV9 1468 aa19.11■□□□□ 0.65
ATRX-208ENST00000622960 YTHDC2Q9H6S0 1430 aaKnown RBP19.09■□□□□ 0.65
ATRX-208ENST00000622960 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
ATRX-208ENST00000622960 ABCC11Q96J66 1382 aa19.09■□□□□ 0.65
ATRX-208ENST00000622960 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
ATRX-208ENST00000622960 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
ATRX-208ENST00000622960 TMEM132EQ6IEE7 984 aa19.08■□□□□ 0.64
ATRX-208ENST00000622960 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms