RNA–Protein interactions for RNA: ENST00000622887.1

HUWE1-215, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, human

TSL 5

Gene HUWE1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HUWE1-215	ENST00000622887	GCC2	Q8IWJ2	1684 aa		34.09	■■■■□ 3.05
HUWE1-215	ENST00000622887	HDGF	P51858	240 aa	Known RBP	34.09	■■■■□ 3.05
HUWE1-215	ENST00000622887	ITGAE	P38570	1179 aa		34.08	■■■■□ 3.05
HUWE1-215	ENST00000622887	RIMS2	Q9UQ26	1411 aa		34.07	■■■■□ 3.04
HUWE1-215	ENST00000622887	PPARGC1B	Q86YN6	1023 aa	Known RBP	34.07	■■■■□ 3.04
HUWE1-215	ENST00000622887	PLEKHG1	Q9ULL1	1385 aa		34.07	■■■■□ 3.04
HUWE1-215	ENST00000622887	TMEM131L	A2VDJ0	1609 aa		34.05	■■■■□ 3.04
HUWE1-215	ENST00000622887	PPP1R15A	O75807	674 aa	Predicted RBP	34.05	■■■■□ 3.04
HUWE1-215	ENST00000622887	RBM33	Q96EV2	1170 aa	Known RBP	34.05	■■■■□ 3.04
HUWE1-215	ENST00000622887	FAM135B	Q49AJ0	1406 aa		34.04	■■■■□ 3.04
HUWE1-215	ENST00000622887	NUP155	O75694	1391 aa		34.03	■■■■□ 3.04
HUWE1-215	ENST00000622887	CHGA	P10645	457 aa	Known RBP	34.03	■■■■□ 3.04
HUWE1-215	ENST00000622887	PHF23	Q9BUL5	403 aa	Predicted RBP	34.03	■■■■□ 3.04
HUWE1-215	ENST00000622887	NWD1	Q149M9	1564 aa		34.02	■■■■□ 3.04
HUWE1-215	ENST00000622887	NKTR	P30414	1462 aa	Known RBP	34.02	■■■■□ 3.04
HUWE1-215	ENST00000622887		E9PCH4	1651 aa		34.02	■■■■□ 3.04
HUWE1-215	ENST00000622887	IQGAP3	Q86VI3	1631 aa		34.01	■■■■□ 3.04
HUWE1-215	ENST00000622887	MYO5B	Q9ULV0	1848 aa		34	■■■■□ 3.03
HUWE1-215	ENST00000622887	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34	■■■■□ 3.03
HUWE1-215	ENST00000622887	TBX22	Q9Y458	520 aa		33.97	■■■■□ 3.03
HUWE1-215	ENST00000622887	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.93	■■■■□ 3.02
HUWE1-215	ENST00000622887	MSH6	P52701	1360 aa		33.92	■■■■□ 3.02
HUWE1-215	ENST00000622887	ADAMTS13	Q76LX8	1427 aa		33.88	■■■■□ 3.01
HUWE1-215	ENST00000622887	CHD2	O14647	1828 aa	Known RBP	33.88	■■■■□ 3.01
HUWE1-215	ENST00000622887	ROBO1	Q9Y6N7	1651 aa		33.86	■■■■□ 3.01
HUWE1-215	ENST00000622887	SLAIN2	Q9P270	581 aa		33.85	■■■■□ 3.01
HUWE1-215	ENST00000622887	PIK3R4	Q99570	1358 aa		33.82	■■■■□ 3
HUWE1-215	ENST00000622887	NCOA3	Q9Y6Q9	1424 aa		33.81	■■■■□ 3
HUWE1-215	ENST00000622887	DIP2A	Q14689	1571 aa		33.8	■■■■□ 3
HUWE1-215	ENST00000622887	RRBP1	Q9P2E9	1410 aa	Known RBP	33.79	■■■■□ 3
HUWE1-215	ENST00000622887	RGS17	Q9UGC6	210 aa	Predicted RBP	33.79	■■■■□ 3
HUWE1-215	ENST00000622887	C14orf37	Q86TY3	774 aa		33.76	■■■□□ 2.99
HUWE1-215	ENST00000622887	AMOTL2	Q9Y2J4	779 aa		33.73	■■■□□ 2.99
HUWE1-215	ENST00000622887	C19orf44	Q9H6X5	657 aa		33.72	■■■□□ 2.99
HUWE1-215	ENST00000622887	SPHKAP	Q2M3C7	1700 aa		33.71	■■■□□ 2.99
HUWE1-215	ENST00000622887	TRPM2	O94759	1503 aa		33.71	■■■□□ 2.99
HUWE1-215	ENST00000622887	NAIP	Q13075	1403 aa		33.7	■■■□□ 2.99
HUWE1-215	ENST00000622887	PTPRU	Q92729	1446 aa		33.7	■■■□□ 2.99
HUWE1-215	ENST00000622887	ZNF326	Q5BKZ1	582 aa	Known RBP	33.7	■■■□□ 2.99
HUWE1-215	ENST00000622887	CADPS2	Q86UW7	1296 aa		33.68	■■■□□ 2.98
HUWE1-215	ENST00000622887	ATF3	P18847	181 aa		33.66	■■■□□ 2.98
HUWE1-215	ENST00000622887	PHLPP1	O60346	1717 aa		33.65	■■■□□ 2.98
HUWE1-215	ENST00000622887	JCAD	Q9P266	1359 aa		33.64	■■■□□ 2.98
HUWE1-215	ENST00000622887	SETBP1	Q9Y6X0	1596 aa		33.64	■■■□□ 2.98
HUWE1-215	ENST00000622887	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.62	■■■□□ 2.97
HUWE1-215	ENST00000622887	NRXN3	Q9Y4C0	1643 aa		33.62	■■■□□ 2.97
HUWE1-215	ENST00000622887	CLTCL1	P53675	1640 aa		33.6	■■■□□ 2.97
HUWE1-215	ENST00000622887	POTEA	Q6S8J7	498 aa		33.59	■■■□□ 2.97
HUWE1-215	ENST00000622887	MET	P08581	1390 aa		33.58	■■■□□ 2.97
HUWE1-215	ENST00000622887	TRIM52	Q96A61	297 aa		33.57	■■■□□ 2.96
HUWE1-215	ENST00000622887	COL16A1	Q07092	1604 aa	Predicted RBP	33.57	■■■□□ 2.96
HUWE1-215	ENST00000622887	HFM1	A2PYH4	1435 aa		33.56	■■■□□ 2.96
HUWE1-215	ENST00000622887	XRN1	Q8IZH2	1706 aa	Known RBP	33.55	■■■□□ 2.96
HUWE1-215	ENST00000622887	NEXMIF	Q5QGS0	1516 aa		33.54	■■■□□ 2.96
HUWE1-215	ENST00000622887	DCC	P43146	1447 aa		33.53	■■■□□ 2.96
HUWE1-215	ENST00000622887	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.51	■■■□□ 2.96
HUWE1-215	ENST00000622887	BRINP3	Q76B58	766 aa		33.51	■■■□□ 2.95
HUWE1-215	ENST00000622887	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.49	■■■□□ 2.95
HUWE1-215	ENST00000622887	SPATA31A6	Q5VVP1	1343 aa		33.49	■■■□□ 2.95
HUWE1-215	ENST00000622887	KIF1B	O60333	1816 aa		33.46	■■■□□ 2.95
HUWE1-215	ENST00000622887	VGF	O15240	615 aa	Predicted RBP	33.45	■■■□□ 2.95
HUWE1-215	ENST00000622887	MST1R	Q04912	1400 aa		33.43	■■■□□ 2.94
HUWE1-215	ENST00000622887	LRP6	O75581	1613 aa		33.42	■■■□□ 2.94
HUWE1-215	ENST00000622887	ADGRL3	Q9HAR2	1447 aa		33.41	■■■□□ 2.94
HUWE1-215	ENST00000622887	RPGRIP1L	Q68CZ1	1315 aa		33.4	■■■□□ 2.94
HUWE1-215	ENST00000622887	ASXL1	Q8IXJ9	1541 aa		33.38	■■■□□ 2.93
HUWE1-215	ENST00000622887	MEX3C	Q5U5Q3	659 aa	Known RBP	33.37	■■■□□ 2.93
HUWE1-215	ENST00000622887	SHPRH	Q149N8	1683 aa		33.36	■■■□□ 2.93
HUWE1-215	ENST00000622887	FOXD1	Q16676	465 aa		33.32	■■■□□ 2.92
HUWE1-215	ENST00000622887	SETD5	Q9C0A6	1442 aa		33.32	■■■□□ 2.92
HUWE1-215	ENST00000622887	PTCH1	Q13635	1447 aa		33.31	■■■□□ 2.92
HUWE1-215	ENST00000622887	ROBO2	Q9HCK4	1378 aa		33.31	■■■□□ 2.92
HUWE1-215	ENST00000622887	ZNF772	Q68DY9	489 aa	Predicted RBP	33.3	■■■□□ 2.92
HUWE1-215	ENST00000622887	NALCN	Q8IZF0	1738 aa		33.3	■■■□□ 2.92
HUWE1-215	ENST00000622887	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.29	■■■□□ 2.92
HUWE1-215	ENST00000622887	NUTM2E	B1AL46	878 aa	Predicted RBP	33.29	■■■□□ 2.92
HUWE1-215	ENST00000622887	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.29	■■■□□ 2.92
HUWE1-215	ENST00000622887	LRRC59	Q96AG4	307 aa	Known RBP	33.29	■■■□□ 2.92
HUWE1-215	ENST00000622887	SETD1A	O15047	1707 aa	Known RBP	33.28	■■■□□ 2.92
HUWE1-215	ENST00000622887	NHSL1	Q5SYE7	1610 aa		33.27	■■■□□ 2.92
HUWE1-215	ENST00000622887	DDX17	Q92841	729 aa	Known RBP	33.26	■■■□□ 2.91
HUWE1-215	ENST00000622887	PRAG1	Q86YV5	1406 aa		33.26	■■■□□ 2.91
HUWE1-215	ENST00000622887	C1orf167	Q5SNV9	1468 aa		33.24	■■■□□ 2.91
HUWE1-215	ENST00000622887	PPL	O60437	1756 aa		33.24	■■■□□ 2.91
HUWE1-215	ENST00000622887	MPHOSPH9	Q99550	1183 aa		33.23	■■■□□ 2.91
HUWE1-215	ENST00000622887	CCDC144A	A2RUR9	1427 aa		33.22	■■■□□ 2.91
HUWE1-215	ENST00000622887	RGL3	Q3MIN7	710 aa		33.19	■■■□□ 2.9
HUWE1-215	ENST00000622887	ADGRF5	Q8IZF2	1346 aa		33.19	■■■□□ 2.9
HUWE1-215	ENST00000622887	PNPLA6	Q8IY17	1366 aa		33.18	■■■□□ 2.9
HUWE1-215	ENST00000622887	ORAI2	Q96SN7	254 aa		33.17	■■■□□ 2.9
HUWE1-215	ENST00000622887	SPATA31E1	Q6ZUB1	1445 aa		33.17	■■■□□ 2.9
HUWE1-215	ENST00000622887	AFF2	P51816	1311 aa		33.13	■■■□□ 2.89
HUWE1-215	ENST00000622887	RXRB	P28702	533 aa		33.13	■■■□□ 2.89
HUWE1-215	ENST00000622887	ANKRD30B	Q9BXX2	1392 aa		33.12	■■■□□ 2.89
HUWE1-215	ENST00000622887	SOS2	Q07890	1332 aa	Predicted RBP	33.11	■■■□□ 2.89
HUWE1-215	ENST00000622887	LAMC1	P11047	1609 aa		33.1	■■■□□ 2.89
HUWE1-215	ENST00000622887	C8orf37	Q96NL8	207 aa		33.08	■■■□□ 2.89
HUWE1-215	ENST00000622887	ACIN1	Q9UKV3	1341 aa	Known RBP	33.07	■■■□□ 2.88
HUWE1-215	ENST00000622887	STK26	Q9P289	416 aa		33.07	■■■□□ 2.88
HUWE1-215	ENST00000622887	LRPPRC	P42704	1394 aa	Known RBP	33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms