RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
LINC00649-219ENST00000622171 KDM5AP29375 1690 aaKnown RBP6.79□□□□□ -1.32
LINC00649-219ENST00000622171 CPS1P31327 1500 aa6.79□□□□□ -1.32
LINC00649-219ENST00000622171 ROCK1Q13464 1354 aa6.79□□□□□ -1.32
LINC00649-219ENST00000622171 TMEM2Q9UHN6 1383 aa6.79□□□□□ -1.32
LINC00649-219ENST00000622171 RIMS2Q9UQ26 1411 aa6.78□□□□□ -1.32
LINC00649-219ENST00000622171 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
LINC00649-219ENST00000622171 NRXN3Q9Y4C0 1643 aa6.78□□□□□ -1.32
LINC00649-219ENST00000622171 DISP3Q9P2K9 1392 aa6.78□□□□□ -1.32
LINC00649-219ENST00000622171 ZFYVE9O95405 1425 aa6.76□□□□□ -1.33
LINC00649-219ENST00000622171 HSPA1LP34931 641 aa6.76□□□□□ -1.33
LINC00649-219ENST00000622171 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
LINC00649-219ENST00000622171 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
LINC00649-219ENST00000622171 ROBO1Q9Y6N7 1651 aa6.76□□□□□ -1.33
LINC00649-219ENST00000622171 PPLO60437 1756 aa6.76□□□□□ -1.33
LINC00649-219ENST00000622171 NWD1Q149M9 1564 aa6.75□□□□□ -1.33
LINC00649-219ENST00000622171 MED1Q15648 1581 aaPredicted RBP6.75□□□□□ -1.33
LINC00649-219ENST00000622171 IQSEC2Q5JU85 1478 aa6.75□□□□□ -1.33
LINC00649-219ENST00000622171 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
LINC00649-219ENST00000622171 TRPM2O94759 1503 aa6.75□□□□□ -1.33
LINC00649-219ENST00000622171 NEXMIFQ5QGS0 1516 aa6.75□□□□□ -1.33
LINC00649-219ENST00000622171 HFM1A2PYH4 1435 aa6.75□□□□□ -1.33
LINC00649-219ENST00000622171 TMEM94Q12767 1356 aa6.74□□□□□ -1.33
LINC00649-219ENST00000622171 SETD1AO15047 1707 aaKnown RBP6.74□□□□□ -1.33
LINC00649-219ENST00000622171 NALCNQ8IZF0 1738 aa6.74□□□□□ -1.33
LINC00649-219ENST00000622171 ILDR2Q71H61 639 aa6.74□□□□□ -1.33
LINC00649-219ENST00000622171 PHLPP1O60346 1717 aa6.73□□□□□ -1.33
LINC00649-219ENST00000622171 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.73□□□□□ -1.33
LINC00649-219ENST00000622171 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
LINC00649-219ENST00000622171 XRN1Q8IZH2 1706 aaKnown RBP6.73□□□□□ -1.33
LINC00649-219ENST00000622171 PLEKHG1Q9ULL1 1385 aa6.72□□□□□ -1.33
LINC00649-219ENST00000622171 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
LINC00649-219ENST00000622171 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
LINC00649-219ENST00000622171 SLC4A1APQ9BWU0 796 aaKnown RBP6.72□□□□□ -1.33
LINC00649-219ENST00000622171 ADAMTS13Q76LX8 1427 aa6.72□□□□□ -1.33
LINC00649-219ENST00000622171 PTPRUQ92729 1446 aa6.72□□□□□ -1.33
LINC00649-219ENST00000622171 KCNA6P17658 529 aa6.71□□□□□ -1.34
LINC00649-219ENST00000622171 SLC52A1Q9NWF4 448 aa6.71□□□□□ -1.34
LINC00649-219ENST00000622171 TOM1O60784 492 aa6.7□□□□□ -1.34
LINC00649-219ENST00000622171 NKTRP30414 1462 aaKnown RBP6.7□□□□□ -1.34
LINC00649-219ENST00000622171 METP08581 1390 aa6.69□□□□□ -1.34
LINC00649-219ENST00000622171 RAB3GAP2Q9H2M9 1393 aa6.69□□□□□ -1.34
LINC00649-219ENST00000622171 DIP2AQ14689 1571 aa6.69□□□□□ -1.34
LINC00649-219ENST00000622171 SETBP1Q9Y6X0 1596 aa6.69□□□□□ -1.34
LINC00649-219ENST00000622171 RGL3Q3MIN7 710 aa6.69□□□□□ -1.34
LINC00649-219ENST00000622171 RGPD8O14715 1765 aaPredicted RBP6.69□□□□□ -1.34
LINC00649-219ENST00000622171 ASXL1Q8IXJ9 1541 aa6.68□□□□□ -1.34
LINC00649-219ENST00000622171 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
LINC00649-219ENST00000622171 AMOTL2Q9Y2J4 779 aa6.67□□□□□ -1.34
LINC00649-219ENST00000622171 COL16A1Q07092 1604 aaPredicted RBP6.67□□□□□ -1.34
LINC00649-219ENST00000622171 MSH6P52701 1360 aa6.67□□□□□ -1.34
LINC00649-219ENST00000622171 CCDC144AA2RUR9 1427 aa6.67□□□□□ -1.34
LINC00649-219ENST00000622171 SETD5Q9C0A6 1442 aa6.67□□□□□ -1.34
LINC00649-219ENST00000622171 MPHOSPH9Q99550 1183 aa6.66□□□□□ -1.34
LINC00649-219ENST00000622171 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
LINC00649-219ENST00000622171 NUTM2FA1L443 756 aa6.65□□□□□ -1.34
LINC00649-219ENST00000622171 PLEKHG5O94827 1062 aa6.65□□□□□ -1.34
LINC00649-219ENST00000622171 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC00649-219ENST00000622171 PHF23Q9BUL5 403 aaPredicted RBP6.65□□□□□ -1.34
LINC00649-219ENST00000622171 STK26Q9P289 416 aa6.65□□□□□ -1.34
LINC00649-219ENST00000622171 NHSL1Q5SYE7 1610 aa6.65□□□□□ -1.35
LINC00649-219ENST00000622171 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
LINC00649-219ENST00000622171 ROBO2Q9HCK4 1378 aa6.64□□□□□ -1.35
LINC00649-219ENST00000622171 LRP6O75581 1613 aa6.64□□□□□ -1.35
LINC00649-219ENST00000622171 KNDC1Q76NI1 1749 aa6.64□□□□□ -1.35
LINC00649-219ENST00000622171 SAFB2Q14151 953 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC00649-219ENST00000622171 SPATA31E1Q6ZUB1 1445 aa6.63□□□□□ -1.35
LINC00649-219ENST00000622171 PLEKHH1Q9ULM0 1364 aa6.63□□□□□ -1.35
LINC00649-219ENST00000622171 TBX22Q9Y458 520 aa6.63□□□□□ -1.35
LINC00649-219ENST00000622171 SHPRHQ149N8 1683 aa6.62□□□□□ -1.35
LINC00649-219ENST00000622171 MST1RQ04912 1400 aa6.62□□□□□ -1.35
LINC00649-219ENST00000622171 ADGRL3Q9HAR2 1447 aa6.62□□□□□ -1.35
LINC00649-219ENST00000622171 NUTM2BA6NNL0 878 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-219ENST00000622171 NUTM2EB1AL46 878 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-219ENST00000622171 HDGFP51858 240 aaKnown RBP6.62□□□□□ -1.35
LINC00649-219ENST00000622171 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-219ENST00000622171 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-219ENST00000622171 SLAIN2Q9P270 581 aa6.62□□□□□ -1.35
LINC00649-219ENST00000622171 FMN2Q9NZ56 1722 aa6.62□□□□□ -1.35
LINC00649-219ENST00000622171 AHDC1Q5TGY3 1603 aaPredicted RBP6.61□□□□□ -1.35
LINC00649-219ENST00000622171 ATF3P18847 181 aa6.61□□□□□ -1.35
LINC00649-219ENST00000622171 WAPLQ7Z5K2 1190 aa6.61□□□□□ -1.35
LINC00649-219ENST00000622171 KDM2AQ9Y2K7 1162 aa6.61□□□□□ -1.35
LINC00649-219ENST00000622171 FAM135BQ49AJ0 1406 aa6.6□□□□□ -1.35
LINC00649-219ENST00000622171 ARHGEF28Q8N1W1 1705 aaKnown RBP6.6□□□□□ -1.35
LINC00649-219ENST00000622171 BRINP3Q76B58 766 aa6.6□□□□□ -1.35
LINC00649-219ENST00000622171 PIK3C2GO75747 1445 aa6.59□□□□□ -1.35
LINC00649-219ENST00000622171 PIK3R4Q99570 1358 aa6.59□□□□□ -1.35
LINC00649-219ENST00000622171 LAMC1P11047 1609 aa6.59□□□□□ -1.35
LINC00649-219ENST00000622171 CFAP70Q5T0N1 1121 aa6.59□□□□□ -1.35
LINC00649-219ENST00000622171 ORAI2Q96SN7 254 aa6.59□□□□□ -1.35
LINC00649-219ENST00000622171 RGS17Q9UGC6 210 aaPredicted RBP6.59□□□□□ -1.35
LINC00649-219ENST00000622171 PTCH1Q13635 1447 aa6.59□□□□□ -1.36
LINC00649-219ENST00000622171 USP32Q8NFA0 1604 aa6.58□□□□□ -1.36
LINC00649-219ENST00000622171 CDC42BPGQ6DT37 1551 aa6.58□□□□□ -1.36
LINC00649-219ENST00000622171 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
LINC00649-219ENST00000622171 MEX3CQ5U5Q3 659 aaKnown RBP6.58□□□□□ -1.36
LINC00649-219ENST00000622171 POTEAQ6S8J7 498 aa6.58□□□□□ -1.36
LINC00649-219ENST00000622171 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
LINC00649-219ENST00000622171 C19orf44Q9H6X5 657 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms