RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 MYO5BQ9ULV0 1848 aa23.71■■□□□ 1.39
GTF2I-220ENST00000621640 NKTRP30414 1462 aaKnown RBP23.71■■□□□ 1.39
GTF2I-220ENST00000621640 ROCK1Q13464 1354 aa23.71■■□□□ 1.39
GTF2I-220ENST00000621640 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
GTF2I-220ENST00000621640 RBM33Q96EV2 1170 aaKnown RBP23.69■■□□□ 1.38
GTF2I-220ENST00000621640 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
GTF2I-220ENST00000621640 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
GTF2I-220ENST00000621640 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
GTF2I-220ENST00000621640 E9PCH4 1651 aa23.68■■□□□ 1.38
GTF2I-220ENST00000621640 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
GTF2I-220ENST00000621640 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
GTF2I-220ENST00000621640 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.38
GTF2I-220ENST00000621640 BCANQ96GW7 911 aa23.64■■□□□ 1.37
GTF2I-220ENST00000621640 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
GTF2I-220ENST00000621640 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
GTF2I-220ENST00000621640 MSH6P52701 1360 aa23.59■■□□□ 1.37
GTF2I-220ENST00000621640 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
GTF2I-220ENST00000621640 NUP155O75694 1391 aa23.58■■□□□ 1.37
GTF2I-220ENST00000621640 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.37
GTF2I-220ENST00000621640 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.37
GTF2I-220ENST00000621640 CHGAP10645 457 aaKnown RBP23.57■■□□□ 1.36
GTF2I-220ENST00000621640 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
GTF2I-220ENST00000621640 ITGAEP38570 1179 aa23.56■■□□□ 1.36
GTF2I-220ENST00000621640 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.56■■□□□ 1.36
GTF2I-220ENST00000621640 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
GTF2I-220ENST00000621640 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
GTF2I-220ENST00000621640 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
GTF2I-220ENST00000621640 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
GTF2I-220ENST00000621640 NCOA3Q9Y6Q9 1424 aa23.51■■□□□ 1.35
GTF2I-220ENST00000621640 PIK3R4Q99570 1358 aa23.5■■□□□ 1.35
GTF2I-220ENST00000621640 PHLPP1O60346 1717 aa23.48■■□□□ 1.35
GTF2I-220ENST00000621640 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
GTF2I-220ENST00000621640 TRPM2O94759 1503 aa23.47■■□□□ 1.35
GTF2I-220ENST00000621640 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
GTF2I-220ENST00000621640 NRXN3Q9Y4C0 1643 aa23.45■■□□□ 1.34
GTF2I-220ENST00000621640 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
GTF2I-220ENST00000621640 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
GTF2I-220ENST00000621640 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
GTF2I-220ENST00000621640 POTEAQ6S8J7 498 aa23.42■■□□□ 1.34
GTF2I-220ENST00000621640 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
GTF2I-220ENST00000621640 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
GTF2I-220ENST00000621640 JCADQ9P266 1359 aa23.41■■□□□ 1.34
GTF2I-220ENST00000621640 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
GTF2I-220ENST00000621640 XRN1Q8IZH2 1706 aaKnown RBP23.41■■□□□ 1.34
GTF2I-220ENST00000621640 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
GTF2I-220ENST00000621640 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
GTF2I-220ENST00000621640 CLTCL1P53675 1640 aa23.39■■□□□ 1.33
GTF2I-220ENST00000621640 AHDC1Q5TGY3 1603 aaPredicted RBP23.38■■□□□ 1.33
GTF2I-220ENST00000621640 NAIPQ13075 1403 aa23.38■■□□□ 1.33
GTF2I-220ENST00000621640 ATF3P18847 181 aa23.36■■□□□ 1.33
GTF2I-220ENST00000621640 NEXMIFQ5QGS0 1516 aa23.36■■□□□ 1.33
GTF2I-220ENST00000621640 METP08581 1390 aa23.35■■□□□ 1.33
GTF2I-220ENST00000621640 DCCP43146 1447 aa23.34■■□□□ 1.33
GTF2I-220ENST00000621640 LRP6O75581 1613 aa23.34■■□□□ 1.33
GTF2I-220ENST00000621640 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
GTF2I-220ENST00000621640 BRINP3Q76B58 766 aa23.31■■□□□ 1.32
GTF2I-220ENST00000621640 SHPRHQ149N8 1683 aa23.3■■□□□ 1.32
GTF2I-220ENST00000621640 SPATA31A6Q5VVP1 1343 aa23.3■■□□□ 1.32
GTF2I-220ENST00000621640 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
GTF2I-220ENST00000621640 MST1RQ04912 1400 aa23.28■■□□□ 1.32
GTF2I-220ENST00000621640 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
GTF2I-220ENST00000621640 KIF1BO60333 1816 aa23.26■■□□□ 1.31
GTF2I-220ENST00000621640 ADGRL3Q9HAR2 1447 aa23.25■■□□□ 1.31
GTF2I-220ENST00000621640 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
GTF2I-220ENST00000621640 NALCNQ8IZF0 1738 aa23.24■■□□□ 1.31
GTF2I-220ENST00000621640 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
GTF2I-220ENST00000621640 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
GTF2I-220ENST00000621640 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
GTF2I-220ENST00000621640 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
GTF2I-220ENST00000621640 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
GTF2I-220ENST00000621640 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
GTF2I-220ENST00000621640 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
GTF2I-220ENST00000621640 VGFO15240 615 aaPredicted RBP23.16■■□□□ 1.3
GTF2I-220ENST00000621640 ZNF772Q68DY9 489 aaPredicted RBP23.16■■□□□ 1.3
GTF2I-220ENST00000621640 SLC4A1APQ9BWU0 796 aaKnown RBP23.16■■□□□ 1.3
GTF2I-220ENST00000621640 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
GTF2I-220ENST00000621640 NUTM2BA6NNL0 878 aaPredicted RBP23.14■■□□□ 1.29
GTF2I-220ENST00000621640 NUTM2EB1AL46 878 aaPredicted RBP23.14■■□□□ 1.29
GTF2I-220ENST00000621640 NUTM2AQ8IVF1 878 aaPredicted RBP23.14■■□□□ 1.29
GTF2I-220ENST00000621640 PPLO60437 1756 aa23.14■■□□□ 1.29
GTF2I-220ENST00000621640 RPGRIP1LQ68CZ1 1315 aa23.12■■□□□ 1.29
GTF2I-220ENST00000621640 C1orf167Q5SNV9 1468 aa23.12■■□□□ 1.29
GTF2I-220ENST00000621640 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
GTF2I-220ENST00000621640 PNPLA6Q8IY17 1366 aa23.11■■□□□ 1.29
GTF2I-220ENST00000621640 LAMC1P11047 1609 aa23.11■■□□□ 1.29
GTF2I-220ENST00000621640 FOXD1Q16676 465 aa23.09■■□□□ 1.29
GTF2I-220ENST00000621640 AFF2P51816 1311 aa23.07■■□□□ 1.28
GTF2I-220ENST00000621640 RXRBP28702 533 aa23.04■■□□□ 1.28
GTF2I-220ENST00000621640 ORAI2Q96SN7 254 aa23.04■■□□□ 1.28
GTF2I-220ENST00000621640 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
GTF2I-220ENST00000621640 CDK12Q9NYV4 1490 aaPredicted RBP23.04■■□□□ 1.28
GTF2I-220ENST00000621640 CCDC144AA2RUR9 1427 aa23.03■■□□□ 1.28
GTF2I-220ENST00000621640 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
GTF2I-220ENST00000621640 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
GTF2I-220ENST00000621640 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
GTF2I-220ENST00000621640 C8orf37Q96NL8 207 aa23.01■■□□□ 1.27
GTF2I-220ENST00000621640 CDC42BPGQ6DT37 1551 aa23.01■■□□□ 1.27
GTF2I-220ENST00000621640 IFT172Q9UG01 1749 aa23■■□□□ 1.27
GTF2I-220ENST00000621640 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
GTF2I-220ENST00000621640 TECPR2O15040 1411 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms