RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-224ENST00000621573 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
TARDBP-224ENST00000621573 GRIN2AQ12879 1464 aa13.4□□□□□ -0.26
TARDBP-224ENST00000621573 HIC1Q14526 733 aa13.38□□□□□ -0.27
TARDBP-224ENST00000621573 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
TARDBP-224ENST00000621573 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
TARDBP-224ENST00000621573 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
TARDBP-224ENST00000621573 GNPATO15228 680 aa13.36□□□□□ -0.27
TARDBP-224ENST00000621573 ZMYND10O75800 440 aa13.36□□□□□ -0.27
TARDBP-224ENST00000621573 PRSS12P56730 875 aa13.36□□□□□ -0.27
TARDBP-224ENST00000621573 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
TARDBP-224ENST00000621573 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
TARDBP-224ENST00000621573 FECHP22830 423 aa13.35□□□□□ -0.27
TARDBP-224ENST00000621573 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
TARDBP-224ENST00000621573 NUP160Q12769 1436 aa13.34□□□□□ -0.27
TARDBP-224ENST00000621573 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.273e-9■■□□□ 11.9
TARDBP-224ENST00000621573 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
TARDBP-224ENST00000621573 CUL7Q14999 1698 aa13.34□□□□□ -0.27
TARDBP-224ENST00000621573 EEA1Q15075 1411 aa13.33□□□□□ -0.28
TARDBP-224ENST00000621573 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
TARDBP-224ENST00000621573 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
TARDBP-224ENST00000621573 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
TARDBP-224ENST00000621573 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
TARDBP-224ENST00000621573 TTC13Q8NBP0 860 aa13.32□□□□□ -0.28
TARDBP-224ENST00000621573 SLC4A5Q9BY07 1137 aa13.32□□□□□ -0.28
TARDBP-224ENST00000621573 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
TARDBP-224ENST00000621573 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
TARDBP-224ENST00000621573 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
TARDBP-224ENST00000621573 VPS9D1Q9Y2B5 631 aa13.31□□□□□ -0.28
TARDBP-224ENST00000621573 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
TARDBP-224ENST00000621573 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
TARDBP-224ENST00000621573 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
TARDBP-224ENST00000621573 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
TARDBP-224ENST00000621573 TK2O00142 265 aa13.28□□□□□ -0.28
TARDBP-224ENST00000621573 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
TARDBP-224ENST00000621573 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-224ENST00000621573 ADGRD1Q6QNK2 874 aa13.27□□□□□ -0.29
TARDBP-224ENST00000621573 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
TARDBP-224ENST00000621573 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
TARDBP-224ENST00000621573 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
TARDBP-224ENST00000621573 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
TARDBP-224ENST00000621573 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
TARDBP-224ENST00000621573 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
TARDBP-224ENST00000621573 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
TARDBP-224ENST00000621573 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
TARDBP-224ENST00000621573 RABGEF1Q9UJ41 708 aa13.25□□□□□ -0.29
TARDBP-224ENST00000621573 C3orf80F5H4A9 247 aa13.24□□□□□ -0.29
TARDBP-224ENST00000621573 PACS2Q86VP3 889 aa13.24□□□□□ -0.29
TARDBP-224ENST00000621573 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-224ENST00000621573 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
TARDBP-224ENST00000621573 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-224ENST00000621573 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
TARDBP-224ENST00000621573 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
TARDBP-224ENST00000621573 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
TARDBP-224ENST00000621573 IRF6O14896 467 aa13.22□□□□□ -0.29
TARDBP-224ENST00000621573 ADGRG1Q9Y653 693 aa13.22□□□□□ -0.29
TARDBP-224ENST00000621573 HRO43593 1189 aa13.21□□□□□ -0.29
TARDBP-224ENST00000621573 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
TARDBP-224ENST00000621573 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
TARDBP-224ENST00000621573 TATDN2Q93075 761 aa13.2□□□□□ -0.3
TARDBP-224ENST00000621573 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
TARDBP-224ENST00000621573 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
TARDBP-224ENST00000621573 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
TARDBP-224ENST00000621573 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
TARDBP-224ENST00000621573 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
TARDBP-224ENST00000621573 SMAPO00193 183 aa13.18□□□□□ -0.3
TARDBP-224ENST00000621573 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
TARDBP-224ENST00000621573 TTBK1Q5TCY1 1321 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-224ENST00000621573 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-224ENST00000621573 OATP04181 439 aa13.16□□□□□ -0.3
TARDBP-224ENST00000621573 EYA1Q99502 592 aa13.16□□□□□ -0.3
TARDBP-224ENST00000621573 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
TARDBP-224ENST00000621573 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-224ENST00000621573 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
TARDBP-224ENST00000621573 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
TARDBP-224ENST00000621573 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
TARDBP-224ENST00000621573 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
TARDBP-224ENST00000621573 AK7Q96M32 723 aa13.15□□□□□ -0.3
TARDBP-224ENST00000621573 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
TARDBP-224ENST00000621573 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
TARDBP-224ENST00000621573 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
TARDBP-224ENST00000621573 PHOX2BQ99453 314 aa13.13□□□□□ -0.31
TARDBP-224ENST00000621573 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
TARDBP-224ENST00000621573 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
TARDBP-224ENST00000621573 KIF21BO75037 1637 aa13.12□□□□□ -0.31
TARDBP-224ENST00000621573 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
TARDBP-224ENST00000621573 TRIM66O15016 1216 aa13.1□□□□□ -0.31
TARDBP-224ENST00000621573 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
TARDBP-224ENST00000621573 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
TARDBP-224ENST00000621573 PTPRGP23470 1445 aa13.1□□□□□ -0.31
TARDBP-224ENST00000621573 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
TARDBP-224ENST00000621573 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
TARDBP-224ENST00000621573 RCCD1A6NED2 376 aa13.08□□□□□ -0.32
TARDBP-224ENST00000621573 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
TARDBP-224ENST00000621573 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
TARDBP-224ENST00000621573 CTTNBP2Q8WZ74 1663 aa13.06□□□□□ -0.32
TARDBP-224ENST00000621573 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
TARDBP-224ENST00000621573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
TARDBP-224ENST00000621573 DNAJB2P25686 324 aa13.05□□□□□ -0.32
TARDBP-224ENST00000621573 AMHR2Q16671 573 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms