RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
SRSF3-207ENST00000620389 ZNF771Q7L3S4 317 aaPredicted RBP10.7□□□□□ -0.7
SRSF3-207ENST00000620389 DNAJC5BQ9UF47 199 aa10.7□□□□□ -0.7
SRSF3-207ENST00000620389 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
SRSF3-207ENST00000620389 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
SRSF3-207ENST00000620389 KCNJ4P48050 445 aa10.7□□□□□ -0.7
SRSF3-207ENST00000620389 NBPF1Q3BBV0 1214 aa10.7□□□□□ -0.7
SRSF3-207ENST00000620389 DUSP27Q5VZP5 1158 aa10.7□□□□□ -0.7
SRSF3-207ENST00000620389 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
SRSF3-207ENST00000620389 INSRP06213 1382 aa10.69□□□□□ -0.7
SRSF3-207ENST00000620389 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
SRSF3-207ENST00000620389 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
SRSF3-207ENST00000620389 RRP7BPQ9NSQ0 103 aa10.69□□□□□ -0.7
SRSF3-207ENST00000620389 SCAPERQ9BY12 1400 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 RAB3GAP1Q15042 981 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 ZMYM4Q5VZL5 1548 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 KLHL40Q2TBA0 621 aa10.68□□□□□ -0.7
SRSF3-207ENST00000620389 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
SRSF3-207ENST00000620389 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
SRSF3-207ENST00000620389 BIVM-ERCC5R4GMW8 1640 aa10.67□□□□□ -0.7
SRSF3-207ENST00000620389 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
SRSF3-207ENST00000620389 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
SRSF3-207ENST00000620389 CERS3Q8IU89 383 aa10.67□□□□□ -0.7
SRSF3-207ENST00000620389 RTEL1-TNFRSF6BF6WH68 1400 aa10.67□□□□□ -0.7
SRSF3-207ENST00000620389 ZNF445P59923 1031 aa10.67□□□□□ -0.7
SRSF3-207ENST00000620389 PARD3Q8TEW0 1356 aa10.66□□□□□ -0.7
SRSF3-207ENST00000620389 ANKRD30BQ9BXX2 1392 aa10.66□□□□□ -0.7
SRSF3-207ENST00000620389 RNF216Q9NWF9 866 aaPredicted RBP10.66□□□□□ -0.7
SRSF3-207ENST00000620389 CCDC39Q9UFE4 941 aa10.66□□□□□ -0.7
SRSF3-207ENST00000620389 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
SRSF3-207ENST00000620389 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
SRSF3-207ENST00000620389 CCDC144AA2RUR9 1427 aa10.66□□□□□ -0.7
SRSF3-207ENST00000620389 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
SRSF3-207ENST00000620389 HSP90AB1P08238 724 aaKnown RBP10.65□□□□□ -0.7
SRSF3-207ENST00000620389 PDCL2Q8N4E4 241 aa10.65□□□□□ -0.7
SRSF3-207ENST00000620389 SMC5Q8IY18 1101 aa10.65□□□□□ -0.7
SRSF3-207ENST00000620389 RBSNQ9H1K0 784 aa10.65□□□□□ -0.7
SRSF3-207ENST00000620389 GOLGA6L22H0YM25 854 aa10.64□□□□□ -0.71
SRSF3-207ENST00000620389 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
SRSF3-207ENST00000620389 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.711e-26■■■■■ 28.5
SRSF3-207ENST00000620389 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
SRSF3-207ENST00000620389 CLUAP1Q96AJ1 413 aa10.64□□□□□ -0.71
SRSF3-207ENST00000620389 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 CGNL1Q0VF96 1302 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
SRSF3-207ENST00000620389 TIGD1Q96MW7 591 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 KDM5CP41229 1560 aa10.63□□□□□ -0.71
SRSF3-207ENST00000620389 ZSCAN23Q3MJ62 389 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
SRSF3-207ENST00000620389 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 FEZ1Q99689 392 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 PLEKHH1Q9ULM0 1364 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
SRSF3-207ENST00000620389 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
SRSF3-207ENST00000620389 KDM6BO15054 1643 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 TULP2O00295 520 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 BCAR3O75815 825 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 CAPN2P17655 700 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 MMP14P50281 582 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 SNX21Q969T3 373 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 GCC2Q8IWJ2 1684 aa10.61□□□□□ -0.71
SRSF3-207ENST00000620389 TRIM6-TRIM34B2RNG4 842 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 CAVIN1Q6NZI2 390 aaKnown RBP10.6□□□□□ -0.71
SRSF3-207ENST00000620389 CLEC17AQ6ZS10 378 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 ZNF521Q96K83 1311 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 OGFRQ9NZT2 677 aa10.6□□□□□ -0.71
SRSF3-207ENST00000620389 MTUS2Q5JR59 1369 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
SRSF3-207ENST00000620389 PDE3AQ14432 1141 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 ANKRD7Q92527 254 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 ADAMTS8Q9UP79 889 aa10.59□□□□□ -0.71
SRSF3-207ENST00000620389 MBD5Q9P267 1494 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 SSFA2P28290 1259 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 SLFN5Q08AF3 891 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 KIF21AQ7Z4S6 1674 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 BAG4O95429 457 aaKnown RBP10.58□□□□□ -0.72
SRSF3-207ENST00000620389 PTMAP06454 111 aaKnown RBP10.58□□□□□ -0.72
SRSF3-207ENST00000620389 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 HDAC5Q9UQL6 1122 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 E9PCH4 1651 aa10.58□□□□□ -0.72
SRSF3-207ENST00000620389 SOX12O15370 315 aa10.57□□□□□ -0.72
SRSF3-207ENST00000620389 NOLC1Q14978 699 aaKnown RBP eCLIP10.57□□□□□ -0.723e-18■■■□□ 19.1
SRSF3-207ENST00000620389 SLC52A1Q9NWF4 448 aa10.57□□□□□ -0.72
SRSF3-207ENST00000620389 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms