RNA–Protein interactions for RNA: ENST00000620337.4

LINC00221-203, long intergenic non-protein coding RNA 221, humanhuman

TSL 5

Gene LINC00221, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-203ENST00000620337 MYO5BQ9ULV0 1848 aa25.51■■□□□ 1.67
LINC00221-203ENST00000620337 BCANQ96GW7 911 aa25.51■■□□□ 1.67
LINC00221-203ENST00000620337 SLC26A8Q96RN1 970 aa25.51■■□□□ 1.67
LINC00221-203ENST00000620337 PLEKHG1Q9ULL1 1385 aa25.49■■□□□ 1.67
LINC00221-203ENST00000620337 KCNA6P17658 529 aa25.48■■□□□ 1.67
LINC00221-203ENST00000620337 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
LINC00221-203ENST00000620337 SPHKAPQ2M3C7 1700 aa25.47■■□□□ 1.67
LINC00221-203ENST00000620337 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
LINC00221-203ENST00000620337 PIP4K2BP78356 416 aa25.44■■□□□ 1.66
LINC00221-203ENST00000620337 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
LINC00221-203ENST00000620337 TBX22Q9Y458 520 aa25.41■■□□□ 1.66
LINC00221-203ENST00000620337 TRPM2O94759 1503 aa25.4■■□□□ 1.66
LINC00221-203ENST00000620337 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
LINC00221-203ENST00000620337 SENP3Q9H4L4 574 aaPredicted RBP25.39■■□□□ 1.66
LINC00221-203ENST00000620337 PROSER2Q86WR7 435 aaPredicted RBP25.38■■□□□ 1.65
LINC00221-203ENST00000620337 NKTRP30414 1462 aaKnown RBP25.38■■□□□ 1.65
LINC00221-203ENST00000620337 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
LINC00221-203ENST00000620337 NWD1Q149M9 1564 aa25.37■■□□□ 1.65
LINC00221-203ENST00000620337 TMEM94Q12767 1356 aa25.37■■□□□ 1.65
LINC00221-203ENST00000620337 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
LINC00221-203ENST00000620337 CLTCL1P53675 1640 aa25.35■■□□□ 1.65
LINC00221-203ENST00000620337 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
LINC00221-203ENST00000620337 XIRP1Q702N8 1843 aaKnown RBP25.34■■□□□ 1.65
LINC00221-203ENST00000620337 DIP2AQ14689 1571 aa25.34■■□□□ 1.65
LINC00221-203ENST00000620337 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
LINC00221-203ENST00000620337 HSPA1LP34931 641 aa25.33■■□□□ 1.65
LINC00221-203ENST00000620337 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
LINC00221-203ENST00000620337 CHD2O14647 1828 aaKnown RBP25.31■■□□□ 1.64
LINC00221-203ENST00000620337 KIF1BO60333 1816 aa25.29■■□□□ 1.64
LINC00221-203ENST00000620337 RBM33Q96EV2 1170 aaKnown RBP25.27■■□□□ 1.64
LINC00221-203ENST00000620337 MPHOSPH9Q99550 1183 aa25.27■■□□□ 1.64
LINC00221-203ENST00000620337 DISP3Q9P2K9 1392 aa25.27■■□□□ 1.64
LINC00221-203ENST00000620337 SETD5Q9C0A6 1442 aa25.27■■□□□ 1.64
LINC00221-203ENST00000620337 SETBP1Q9Y6X0 1596 aa25.26■■□□□ 1.63
LINC00221-203ENST00000620337 MSH6P52701 1360 aa25.25■■□□□ 1.63
LINC00221-203ENST00000620337 NEXMIFQ5QGS0 1516 aa25.25■■□□□ 1.63
LINC00221-203ENST00000620337 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
LINC00221-203ENST00000620337 FOXD1Q16676 465 aa25.23■■□□□ 1.63
LINC00221-203ENST00000620337 RPGRIP1LQ68CZ1 1315 aa25.22■■□□□ 1.63
LINC00221-203ENST00000620337 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
LINC00221-203ENST00000620337 AMOTL2Q9Y2J4 779 aa25.21■■□□□ 1.63
LINC00221-203ENST00000620337 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
LINC00221-203ENST00000620337 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
LINC00221-203ENST00000620337 CCDC144AA2RUR9 1427 aa25.19■■□□□ 1.62
LINC00221-203ENST00000620337 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
LINC00221-203ENST00000620337 C14orf37Q86TY3 774 aa25.17■■□□□ 1.62
LINC00221-203ENST00000620337 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
LINC00221-203ENST00000620337 METP08581 1390 aa25.15■■□□□ 1.62
LINC00221-203ENST00000620337 C19orf44Q9H6X5 657 aa25.14■■□□□ 1.62
LINC00221-203ENST00000620337 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
LINC00221-203ENST00000620337 XRN1Q8IZH2 1706 aaKnown RBP25.12■■□□□ 1.61
LINC00221-203ENST00000620337 CADPS2Q86UW7 1296 aa25.11■■□□□ 1.61
LINC00221-203ENST00000620337 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
LINC00221-203ENST00000620337 PPLO60437 1756 aa25.09■■□□□ 1.61
LINC00221-203ENST00000620337 ATF3P18847 181 aa25.09■■□□□ 1.61
LINC00221-203ENST00000620337 ROBO1Q9Y6N7 1651 aa25.09■■□□□ 1.61
LINC00221-203ENST00000620337 HRCP23327 699 aa25.07■■□□□ 1.6
LINC00221-203ENST00000620337 RGL3Q3MIN7 710 aa25.07■■□□□ 1.6
LINC00221-203ENST00000620337 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.06■■□□□ 1.6
LINC00221-203ENST00000620337 ANKRD30BQ9BXX2 1392 aa25.05■■□□□ 1.6
LINC00221-203ENST00000620337 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
LINC00221-203ENST00000620337 DCCP43146 1447 aa25.04■■□□□ 1.6
LINC00221-203ENST00000620337 ILDR2Q71H61 639 aa25.02■■□□□ 1.6
LINC00221-203ENST00000620337 SETD1AO15047 1707 aaKnown RBP25.01■■□□□ 1.59
LINC00221-203ENST00000620337 ADGRF5Q8IZF2 1346 aa25.01■■□□□ 1.59
LINC00221-203ENST00000620337 PTCH1Q13635 1447 aa25■■□□□ 1.59
LINC00221-203ENST00000620337 PRAG1Q86YV5 1406 aa24.99■■□□□ 1.59
LINC00221-203ENST00000620337 ADGRL3Q9HAR2 1447 aa24.98■■□□□ 1.59
LINC00221-203ENST00000620337 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
LINC00221-203ENST00000620337 ROBO2Q9HCK4 1378 aa24.95■■□□□ 1.59
LINC00221-203ENST00000620337 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
LINC00221-203ENST00000620337 PHLPP1O60346 1717 aa24.93■■□□□ 1.58
LINC00221-203ENST00000620337 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
LINC00221-203ENST00000620337 BRINP3Q76B58 766 aa24.92■■□□□ 1.58
LINC00221-203ENST00000620337 MST1RQ04912 1400 aa24.92■■□□□ 1.58
LINC00221-203ENST00000620337 JCADQ9P266 1359 aa24.9■■□□□ 1.58
LINC00221-203ENST00000620337 AHDC1Q5TGY3 1603 aaPredicted RBP24.9■■□□□ 1.58
LINC00221-203ENST00000620337 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.58
LINC00221-203ENST00000620337 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
LINC00221-203ENST00000620337 MYOM2P54296 1465 aa24.88■■□□□ 1.57
LINC00221-203ENST00000620337 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
LINC00221-203ENST00000620337 TECPR2O15040 1411 aa24.86■■□□□ 1.57
LINC00221-203ENST00000620337 NRXN1Q9ULB1 1477 aa24.86■■□□□ 1.57
LINC00221-203ENST00000620337 ABCC11Q96J66 1382 aa24.86■■□□□ 1.57
LINC00221-203ENST00000620337 SOCS7O14512 581 aa24.86■■□□□ 1.57
LINC00221-203ENST00000620337 C14orf93Q9H972 538 aaKnown RBP24.86■■□□□ 1.57
LINC00221-203ENST00000620337 ASXL1Q8IXJ9 1541 aa24.86■■□□□ 1.57
LINC00221-203ENST00000620337 STK26Q9P289 416 aa24.85■■□□□ 1.57
LINC00221-203ENST00000620337 TMEM132EQ6IEE7 984 aa24.84■■□□□ 1.57
LINC00221-203ENST00000620337 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
LINC00221-203ENST00000620337 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
LINC00221-203ENST00000620337 C1orf167Q5SNV9 1468 aa24.81■■□□□ 1.56
LINC00221-203ENST00000620337 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
LINC00221-203ENST00000620337 LAMC1P11047 1609 aa24.79■■□□□ 1.56
LINC00221-203ENST00000620337 SIRT1Q96EB6 747 aa24.79■■□□□ 1.56
LINC00221-203ENST00000620337 SPATA31A6Q5VVP1 1343 aa24.79■■□□□ 1.56
LINC00221-203ENST00000620337 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
LINC00221-203ENST00000620337 WAPLQ7Z5K2 1190 aa24.78■■□□□ 1.56
LINC00221-203ENST00000620337 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
LINC00221-203ENST00000620337 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms