RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 HDGFP51858 240 aaKnown RBP31.25■■■□□ 2.59
SGMS1-210ENST00000619438 ACIN1Q9UKV3 1341 aaKnown RBP31.24■■■□□ 2.59
SGMS1-210ENST00000619438 BCANQ96GW7 911 aa31.22■■■□□ 2.59
SGMS1-210ENST00000619438 ZNF316A6NFI3 1004 aaPredicted RBP31.21■■■□□ 2.59
SGMS1-210ENST00000619438 MPHOSPH9Q99550 1183 aa31.19■■■□□ 2.58
SGMS1-210ENST00000619438 PPP1R15AO75807 674 aaPredicted RBP31.19■■■□□ 2.58
SGMS1-210ENST00000619438 TMEM131LA2VDJ0 1609 aa31.18■■■□□ 2.58
SGMS1-210ENST00000619438 SPHKAPQ2M3C7 1700 aa31.16■■■□□ 2.58
SGMS1-210ENST00000619438 IQSEC2Q5JU85 1478 aa31.16■■■□□ 2.58
SGMS1-210ENST00000619438 FOXD1Q16676 465 aa31.16■■■□□ 2.58
SGMS1-210ENST00000619438 ZNF326Q5BKZ1 582 aaKnown RBP31.14■■■□□ 2.58
SGMS1-210ENST00000619438 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.14■■■□□ 2.58
SGMS1-210ENST00000619438 SENP3Q9H4L4 574 aaPredicted RBP31.14■■■□□ 2.58
SGMS1-210ENST00000619438 STRCP1A6NGW2 1772 aa31.13■■■□□ 2.57
SGMS1-210ENST00000619438 RIMS2Q9UQ26 1411 aa31.12■■■□□ 2.57
SGMS1-210ENST00000619438 NUTM2DQ5VT03 806 aaPredicted RBP31.12■■■□□ 2.57
SGMS1-210ENST00000619438 CPS1P31327 1500 aa31.11■■■□□ 2.57
SGMS1-210ENST00000619438 DIEXFQ68CQ4 756 aaKnown RBP31.11■■■□□ 2.57
SGMS1-210ENST00000619438 SLC26A8Q96RN1 970 aa31.1■■■□□ 2.57
SGMS1-210ENST00000619438 ZFYVE9O95405 1425 aa31.06■■■□□ 2.56
SGMS1-210ENST00000619438 TRPM2O94759 1503 aa31.06■■■□□ 2.56
SGMS1-210ENST00000619438 PLEKHG1Q9ULL1 1385 aa31.01■■■□□ 2.55
SGMS1-210ENST00000619438 UBAP1LF5GYI3 381 aa31■■■□□ 2.55
SGMS1-210ENST00000619438 CLTCL1P53675 1640 aa31■■■□□ 2.55
SGMS1-210ENST00000619438 CCDC144AA2RUR9 1427 aa30.96■■■□□ 2.55
SGMS1-210ENST00000619438 LRRC7Q96NW7 1537 aa30.96■■■□□ 2.55
SGMS1-210ENST00000619438 KIF1BO60333 1816 aa30.94■■■□□ 2.54
SGMS1-210ENST00000619438 KCNA6P17658 529 aa30.93■■■□□ 2.54
SGMS1-210ENST00000619438 TBX22Q9Y458 520 aa30.93■■■□□ 2.54
SGMS1-210ENST00000619438 RGL3Q3MIN7 710 aa30.9■■■□□ 2.54
SGMS1-210ENST00000619438 XIRP1Q702N8 1843 aaKnown RBP30.89■■■□□ 2.54
SGMS1-210ENST00000619438 VGFO15240 615 aaPredicted RBP30.89■■■□□ 2.54
SGMS1-210ENST00000619438 RPGRIP1LQ68CZ1 1315 aa30.88■■■□□ 2.53
SGMS1-210ENST00000619438 PROSER2Q86WR7 435 aaPredicted RBP30.86■■■□□ 2.53
SGMS1-210ENST00000619438 TOM1O60784 492 aa30.85■■■□□ 2.53
SGMS1-210ENST00000619438 CHD2O14647 1828 aaKnown RBP30.84■■■□□ 2.53
SGMS1-210ENST00000619438 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
SGMS1-210ENST00000619438 PIP4K2BP78356 416 aa30.83■■■□□ 2.53
SGMS1-210ENST00000619438 TIMELESSQ9UNS1 1208 aa30.83■■■□□ 2.53
SGMS1-210ENST00000619438 NWD1Q149M9 1564 aa30.82■■■□□ 2.52
SGMS1-210ENST00000619438 ADAMTS13Q76LX8 1427 aa30.82■■■□□ 2.52
SGMS1-210ENST00000619438 ALKQ9UM73 1620 aa30.81■■■□□ 2.52
SGMS1-210ENST00000619438 NEXMIFQ5QGS0 1516 aa30.8■■■□□ 2.52
SGMS1-210ENST00000619438 RBM33Q96EV2 1170 aaKnown RBP30.79■■■□□ 2.52
SGMS1-210ENST00000619438 DIP2AQ14689 1571 aa30.79■■■□□ 2.52
SGMS1-210ENST00000619438 NRXN3Q9Y4C0 1643 aa30.77■■■□□ 2.52
SGMS1-210ENST00000619438 TMEM94Q12767 1356 aa30.77■■■□□ 2.52
SGMS1-210ENST00000619438 NKTRP30414 1462 aaKnown RBP30.76■■■□□ 2.51
SGMS1-210ENST00000619438 PIK3R4Q99570 1358 aa30.75■■■□□ 2.51
SGMS1-210ENST00000619438 AMOTL2Q9Y2J4 779 aa30.75■■■□□ 2.51
SGMS1-210ENST00000619438 ANKRD30BQ9BXX2 1392 aa30.75■■■□□ 2.51
SGMS1-210ENST00000619438 SPATA31E1Q6ZUB1 1445 aa30.74■■■□□ 2.51
SGMS1-210ENST00000619438 SETBP1Q9Y6X0 1596 aa30.74■■■□□ 2.51
SGMS1-210ENST00000619438 C14orf37Q86TY3 774 aa30.7■■■□□ 2.5
SGMS1-210ENST00000619438 PPLO60437 1756 aa30.69■■■□□ 2.5
SGMS1-210ENST00000619438 ADGRF5Q8IZF2 1346 aa30.68■■■□□ 2.5
SGMS1-210ENST00000619438 METP08581 1390 aa30.68■■■□□ 2.5
SGMS1-210ENST00000619438 PTPRUQ92729 1446 aa30.65■■■□□ 2.5
SGMS1-210ENST00000619438 HSPA1LP34931 641 aa30.65■■■□□ 2.5
SGMS1-210ENST00000619438 MSH6P52701 1360 aa30.62■■■□□ 2.49
SGMS1-210ENST00000619438 SIN3AQ96ST3 1273 aa30.61■■■□□ 2.49
SGMS1-210ENST00000619438 XRN1Q8IZH2 1706 aaKnown RBP30.6■■■□□ 2.49
SGMS1-210ENST00000619438 IFT172Q9UG01 1749 aa30.58■■■□□ 2.49
SGMS1-210ENST00000619438 KDM2AQ9Y2K7 1162 aa30.58■■■□□ 2.49
SGMS1-210ENST00000619438 DCAF11Q8TEB1 546 aa30.57■■■□□ 2.48
SGMS1-210ENST00000619438 SETD1AO15047 1707 aaKnown RBP30.57■■■□□ 2.48
SGMS1-210ENST00000619438 C19orf44Q9H6X5 657 aa30.55■■■□□ 2.48
SGMS1-210ENST00000619438 NCOA3Q9Y6Q9 1424 aa30.55■■■□□ 2.48
SGMS1-210ENST00000619438 ATF3P18847 181 aa30.53■■■□□ 2.48
SGMS1-210ENST00000619438 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.52■■■□□ 2.48
SGMS1-210ENST00000619438 NEUROD1Q13562 356 aa30.52■■■□□ 2.48
SGMS1-210ENST00000619438 TMEM132EQ6IEE7 984 aa30.51■■■□□ 2.47
SGMS1-210ENST00000619438 SLAIN2Q9P270 581 aa30.51■■■□□ 2.47
SGMS1-210ENST00000619438 STK26Q9P289 416 aa30.51■■■□□ 2.47
SGMS1-210ENST00000619438 ROBO1Q9Y6N7 1651 aa30.5■■■□□ 2.47
SGMS1-210ENST00000619438 CADPS2Q86UW7 1296 aa30.49■■■□□ 2.47
SGMS1-210ENST00000619438 STAC3Q96MF2 364 aa30.49■■■□□ 2.47
SGMS1-210ENST00000619438 C14orf93Q9H972 538 aaKnown RBP30.49■■■□□ 2.47
SGMS1-210ENST00000619438 PIK3C2GO75747 1445 aa30.48■■■□□ 2.47
SGMS1-210ENST00000619438 CFAP70Q5T0N1 1121 aa30.48■■■□□ 2.47
SGMS1-210ENST00000619438 FAM135BQ49AJ0 1406 aa30.47■■■□□ 2.47
SGMS1-210ENST00000619438 MIER1Q8N108 512 aa30.47■■■□□ 2.47
SGMS1-210ENST00000619438 MYOM2P54296 1465 aa30.45■■■□□ 2.47
SGMS1-210ENST00000619438 DISP3Q9P2K9 1392 aa30.43■■■□□ 2.46
SGMS1-210ENST00000619438 ROBO2Q9HCK4 1378 aa30.42■■■□□ 2.46
SGMS1-210ENST00000619438 TONSLQ96HA7 1378 aa30.41■■■□□ 2.46
SGMS1-210ENST00000619438 NRXN1Q9ULB1 1477 aa30.4■■■□□ 2.46
SGMS1-210ENST00000619438 CENPBP07199 599 aaPredicted RBP30.39■■■□□ 2.46
SGMS1-210ENST00000619438 PTCH1Q13635 1447 aa30.39■■■□□ 2.46
SGMS1-210ENST00000619438 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
SGMS1-210ENST00000619438 LRPPRCP42704 1394 aaKnown RBP30.38■■■□□ 2.45
SGMS1-210ENST00000619438 ABCC11Q96J66 1382 aa30.36■■■□□ 2.45
SGMS1-210ENST00000619438 WAPLQ7Z5K2 1190 aa30.36■■■□□ 2.45
SGMS1-210ENST00000619438 YTHDC2Q9H6S0 1430 aaKnown RBP30.35■■■□□ 2.45
SGMS1-210ENST00000619438 DCCP43146 1447 aa30.33■■■□□ 2.45
SGMS1-210ENST00000619438 ADGRL3Q9HAR2 1447 aa30.33■■■□□ 2.45
SGMS1-210ENST00000619438 PHLPP1O60346 1717 aa30.32■■■□□ 2.44
SGMS1-210ENST00000619438 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
SGMS1-210ENST00000619438 PRAG1Q86YV5 1406 aa30.31■■■□□ 2.44
SGMS1-210ENST00000619438 MED1Q15648 1581 aaPredicted RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms