RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 ABCC5O15440 1437 aa25.49■■□□□ 1.67
PCSK6-217ENST00000618548 R3HCC1Q9Y3T6 440 aaKnown RBP25.49■■□□□ 1.67
PCSK6-217ENST00000618548 AAMPQ13685 434 aa25.48■■□□□ 1.67
PCSK6-217ENST00000618548 TBC1D2Q9BYX2 928 aa25.48■■□□□ 1.67
PCSK6-217ENST00000618548 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
PCSK6-217ENST00000618548 NUTM2DQ5VT03 806 aaPredicted RBP25.47■■□□□ 1.67
PCSK6-217ENST00000618548 GGT6Q6P531 493 aa25.47■■□□□ 1.67
PCSK6-217ENST00000618548 EPRSP07814 1512 aaKnown RBP25.47■■□□□ 1.67
PCSK6-217ENST00000618548 ST18O60284 1047 aa25.47■■□□□ 1.67
PCSK6-217ENST00000618548 IGHDP01880 384 aa25.47■■□□□ 1.67
PCSK6-217ENST00000618548 MCTP1Q6DN14 999 aa25.46■■□□□ 1.67
PCSK6-217ENST00000618548 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
PCSK6-217ENST00000618548 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.46■■□□□ 1.67
PCSK6-217ENST00000618548 SYAP1Q96A49 352 aaPredicted RBP25.45■■□□□ 1.67
PCSK6-217ENST00000618548 RBM10P98175 930 aaKnown RBP25.45■■□□□ 1.66
PCSK6-217ENST00000618548 RRP9O43818 475 aaKnown RBP25.43■■□□□ 1.66
PCSK6-217ENST00000618548 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
PCSK6-217ENST00000618548 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
PCSK6-217ENST00000618548 MTHFSP49914 203 aa25.42■■□□□ 1.66
PCSK6-217ENST00000618548 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
PCSK6-217ENST00000618548 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
PCSK6-217ENST00000618548 DRC7Q8IY82 874 aa25.41■■□□□ 1.66
PCSK6-217ENST00000618548 GOLGA6L4A6NEF3 574 aa25.39■■□□□ 1.66
PCSK6-217ENST00000618548 AMER1Q5JTC6 1135 aaPredicted RBP25.39■■□□□ 1.66
PCSK6-217ENST00000618548 TPM2P07951 284 aa25.39■■□□□ 1.65
PCSK6-217ENST00000618548 CAVIN1Q6NZI2 390 aaKnown RBP25.38■■□□□ 1.65
PCSK6-217ENST00000618548 TSR2Q969E8 191 aaKnown RBP25.38■■□□□ 1.65
PCSK6-217ENST00000618548 PANK2Q9BZ23 570 aa25.38■■□□□ 1.65
PCSK6-217ENST00000618548 RIPK4P57078 832 aa25.38■■□□□ 1.65
PCSK6-217ENST00000618548 KIAA1211Q6ZU35 1233 aa25.38■■□□□ 1.65
PCSK6-217ENST00000618548 HDGFL2Q7Z4V5 671 aaPredicted RBP25.37■■□□□ 1.65
PCSK6-217ENST00000618548 WWC1Q8IX03 1113 aa25.37■■□□□ 1.65
PCSK6-217ENST00000618548 C9orf84Q5VXU9 1444 aa25.37■■□□□ 1.65
PCSK6-217ENST00000618548 XRCC6P12956 609 aaKnown RBP eCLIP25.37■■□□□ 1.65
PCSK6-217ENST00000618548 NESP48681 1621 aa25.37■■□□□ 1.65
PCSK6-217ENST00000618548 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
PCSK6-217ENST00000618548 SOX12O15370 315 aa25.36■■□□□ 1.65
PCSK6-217ENST00000618548 CFAP70Q5T0N1 1121 aa25.36■■□□□ 1.65
PCSK6-217ENST00000618548 ESF1Q9H501 851 aaKnown RBP25.36■■□□□ 1.65
PCSK6-217ENST00000618548 KCNJ4P48050 445 aa25.36■■□□□ 1.65
PCSK6-217ENST00000618548 RNF214Q8ND24 703 aa25.35■■□□□ 1.65
PCSK6-217ENST00000618548 TRIM6-TRIM34B2RNG4 842 aa25.35■■□□□ 1.65
PCSK6-217ENST00000618548 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
PCSK6-217ENST00000618548 CDK11BP21127 795 aaKnown RBP25.34■■□□□ 1.65
PCSK6-217ENST00000618548 NUCB2P80303 420 aa25.34■■□□□ 1.65
PCSK6-217ENST00000618548 LRPPRCP42704 1394 aaKnown RBP25.34■■□□□ 1.65
PCSK6-217ENST00000618548 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
PCSK6-217ENST00000618548 ISY1Q9ULR0 285 aaKnown RBP25.33■■□□□ 1.65
PCSK6-217ENST00000618548 MVPQ14764 893 aaKnown RBP25.33■■□□□ 1.65
PCSK6-217ENST00000618548 SEC24BO95487 1268 aa25.33■■□□□ 1.64
PCSK6-217ENST00000618548 CCDC173Q0VFZ6 552 aa25.32■■□□□ 1.64
PCSK6-217ENST00000618548 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
PCSK6-217ENST00000618548 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
PCSK6-217ENST00000618548 HAP1P54257 671 aaPredicted RBP25.31■■□□□ 1.64
PCSK6-217ENST00000618548 OS9Q13438 667 aaPredicted RBP25.31■■□□□ 1.64
PCSK6-217ENST00000618548 TERF2IPQ9NYB0 399 aa25.31■■□□□ 1.64
PCSK6-217ENST00000618548 ZRSR1Q15695 479 aaKnown RBP25.3■■□□□ 1.64
PCSK6-217ENST00000618548 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
PCSK6-217ENST00000618548 KIF16BQ96L93 1317 aa25.29■■□□□ 1.64
PCSK6-217ENST00000618548 RARSP54136 660 aaKnown RBP25.29■■□□□ 1.64
PCSK6-217ENST00000618548 TBC1D32Q96NH3 1257 aa25.29■■□□□ 1.64
PCSK6-217ENST00000618548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.649e-7■■■□□ 15.2
PCSK6-217ENST00000618548 RRAGDQ9NQL2 400 aaPredicted RBP25.29■■□□□ 1.64
PCSK6-217ENST00000618548 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
PCSK6-217ENST00000618548 CSPP1Q1MSJ5 1256 aa25.28■■□□□ 1.64
PCSK6-217ENST00000618548 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
PCSK6-217ENST00000618548 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
PCSK6-217ENST00000618548 ZMYND15Q9H091 742 aa25.28■■□□□ 1.64
PCSK6-217ENST00000618548 PARD3Q8TEW0 1356 aa25.27■■□□□ 1.64
PCSK6-217ENST00000618548 NINLQ9Y2I6 1382 aa25.27■■□□□ 1.64
PCSK6-217ENST00000618548 C1orf115Q9H7X2 142 aa25.27■■□□□ 1.64
PCSK6-217ENST00000618548 NOB1Q9ULX3 412 aaKnown RBP25.27■■□□□ 1.64
PCSK6-217ENST00000618548 DISP3Q9P2K9 1392 aa25.27■■□□□ 1.64
PCSK6-217ENST00000618548 PRPF40AO75400 957 aaKnown RBP25.27■■□□□ 1.64
PCSK6-217ENST00000618548 PHF14O94880 888 aa25.26■■□□□ 1.63
PCSK6-217ENST00000618548 PLPPR3Q6T4P5 718 aa25.26■■□□□ 1.63
PCSK6-217ENST00000618548 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
PCSK6-217ENST00000618548 HMMRO75330 724 aa25.25■■□□□ 1.63
PCSK6-217ENST00000618548 CLCN1P35523 988 aa25.25■■□□□ 1.63
PCSK6-217ENST00000618548 GGNBP2Q9H3C7 697 aa25.24■■□□□ 1.63
PCSK6-217ENST00000618548 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
PCSK6-217ENST00000618548 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
PCSK6-217ENST00000618548 CDC45O75419 566 aa25.23■■□□□ 1.63
PCSK6-217ENST00000618548 WDR63Q8IWG1 891 aa25.23■■□□□ 1.63
PCSK6-217ENST00000618548 UGGT2Q9NYU1 1516 aa25.23■■□□□ 1.63
PCSK6-217ENST00000618548 K7ELQ4 463 aaPredicted RBP25.23■■□□□ 1.63
PCSK6-217ENST00000618548 RILPL2Q969X0 211 aa25.23■■□□□ 1.63
PCSK6-217ENST00000618548 TMEM132EQ6IEE7 984 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 ATF7IPQ6VMQ6 1270 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 PTPRGP23470 1445 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 REC8O95072 547 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 PCDHB15Q9Y5E8 787 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
PCSK6-217ENST00000618548 DIAPH1O60610 1272 aaKnown RBP25.22■■□□□ 1.63
PCSK6-217ENST00000618548 MAP7D2Q96T17 732 aa25.21■■□□□ 1.63
PCSK6-217ENST00000618548 PER1O15534 1290 aaPredicted RBP25.21■■□□□ 1.63
PCSK6-217ENST00000618548 MPNDQ8N594 471 aa25.21■■□□□ 1.63
PCSK6-217ENST00000618548 TNPO1Q92973 898 aaKnown RBP25.21■■□□□ 1.63
PCSK6-217ENST00000618548 EVC2Q86UK5 1308 aa25.21■■□□□ 1.63
PCSK6-217ENST00000618548 ZSCAN30Q86W11 494 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms