RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
DDB2-213ENST00000617847 KIF1BO60333 1816 aa18.47■□□□□ 0.55
DDB2-213ENST00000617847 HDGFP51858 240 aaKnown RBP18.47■□□□□ 0.55
DDB2-213ENST00000617847 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
DDB2-213ENST00000617847 PLEKHG1Q9ULL1 1385 aa18.45■□□□□ 0.54
DDB2-213ENST00000617847 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
DDB2-213ENST00000617847 CPS1P31327 1500 aa18.41■□□□□ 0.54
DDB2-213ENST00000617847 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
DDB2-213ENST00000617847 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
DDB2-213ENST00000617847 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
DDB2-213ENST00000617847 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
DDB2-213ENST00000617847 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
DDB2-213ENST00000617847 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
DDB2-213ENST00000617847 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
DDB2-213ENST00000617847 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
DDB2-213ENST00000617847 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
DDB2-213ENST00000617847 SPATA31E1Q6ZUB1 1445 aa18.38■□□□□ 0.53
DDB2-213ENST00000617847 ADAMTS13Q76LX8 1427 aa18.38■□□□□ 0.53
DDB2-213ENST00000617847 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
DDB2-213ENST00000617847 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
DDB2-213ENST00000617847 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
DDB2-213ENST00000617847 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
DDB2-213ENST00000617847 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
DDB2-213ENST00000617847 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
DDB2-213ENST00000617847 PPLO60437 1756 aa18.35■□□□□ 0.53
DDB2-213ENST00000617847 BCANQ96GW7 911 aa18.34■□□□□ 0.53
DDB2-213ENST00000617847 KCNA6P17658 529 aa18.34■□□□□ 0.53
DDB2-213ENST00000617847 NWD1Q149M9 1564 aa18.33■□□□□ 0.53
DDB2-213ENST00000617847 LRRC7Q96NW7 1537 aa18.32■□□□□ 0.52
DDB2-213ENST00000617847 ILDR1Q86SU0 546 aaPredicted RBP18.32■□□□□ 0.52
DDB2-213ENST00000617847 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
DDB2-213ENST00000617847 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
DDB2-213ENST00000617847 VGFO15240 615 aaPredicted RBP18.31■□□□□ 0.52
DDB2-213ENST00000617847 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
DDB2-213ENST00000617847 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
DDB2-213ENST00000617847 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
DDB2-213ENST00000617847 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
DDB2-213ENST00000617847 XIRP1Q702N8 1843 aaKnown RBP18.26■□□□□ 0.51
DDB2-213ENST00000617847 PTPRUQ92729 1446 aa18.26■□□□□ 0.51
DDB2-213ENST00000617847 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
DDB2-213ENST00000617847 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
DDB2-213ENST00000617847 METP08581 1390 aa18.24■□□□□ 0.51
DDB2-213ENST00000617847 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
DDB2-213ENST00000617847 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
DDB2-213ENST00000617847 MYOM2P54296 1465 aa18.22■□□□□ 0.51
DDB2-213ENST00000617847 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
DDB2-213ENST00000617847 PROSER2Q86WR7 435 aaPredicted RBP18.22■□□□□ 0.51
DDB2-213ENST00000617847 AMOTL2Q9Y2J4 779 aa18.21■□□□□ 0.51
DDB2-213ENST00000617847 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
DDB2-213ENST00000617847 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
DDB2-213ENST00000617847 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
DDB2-213ENST00000617847 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
DDB2-213ENST00000617847 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
DDB2-213ENST00000617847 TOM1O60784 492 aa18.18■□□□□ 0.5
DDB2-213ENST00000617847 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
DDB2-213ENST00000617847 RBM33Q96EV2 1170 aaKnown RBP18.16■□□□□ 0.5
DDB2-213ENST00000617847 STAC3Q96MF2 364 aa18.16■□□□□ 0.5
DDB2-213ENST00000617847 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
DDB2-213ENST00000617847 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
DDB2-213ENST00000617847 PTCH1Q13635 1447 aa18.13■□□□□ 0.49
DDB2-213ENST00000617847 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
DDB2-213ENST00000617847 LAMC1P11047 1609 aa18.12■□□□□ 0.49
DDB2-213ENST00000617847 MSH6P52701 1360 aa18.12■□□□□ 0.49
DDB2-213ENST00000617847 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
DDB2-213ENST00000617847 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
DDB2-213ENST00000617847 TECPR2O15040 1411 aa18.1■□□□□ 0.49
DDB2-213ENST00000617847 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 PCGF6Q9BYE7 350 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
DDB2-213ENST00000617847 KNDC1Q76NI1 1749 aa18.08■□□□□ 0.49
DDB2-213ENST00000617847 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.08■□□□□ 0.49
DDB2-213ENST00000617847 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
DDB2-213ENST00000617847 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
DDB2-213ENST00000617847 DCCP43146 1447 aa18.07■□□□□ 0.48
DDB2-213ENST00000617847 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
DDB2-213ENST00000617847 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
DDB2-213ENST00000617847 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
DDB2-213ENST00000617847 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
DDB2-213ENST00000617847 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
DDB2-213ENST00000617847 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
DDB2-213ENST00000617847 NALCNQ8IZF0 1738 aa18.04■□□□□ 0.48
DDB2-213ENST00000617847 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
DDB2-213ENST00000617847 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
DDB2-213ENST00000617847 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
DDB2-213ENST00000617847 SIRT1Q96EB6 747 aa18.03■□□□□ 0.48
DDB2-213ENST00000617847 STK26Q9P289 416 aa18.03■□□□□ 0.48
DDB2-213ENST00000617847 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
DDB2-213ENST00000617847 ATF3P18847 181 aa18.01■□□□□ 0.47
DDB2-213ENST00000617847 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
DDB2-213ENST00000617847 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
DDB2-213ENST00000617847 HSPA1LP34931 641 aa18■□□□□ 0.47
DDB2-213ENST00000617847 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
DDB2-213ENST00000617847 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
DDB2-213ENST00000617847 MST1RQ04912 1400 aa17.99■□□□□ 0.47
DDB2-213ENST00000617847 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
DDB2-213ENST00000617847 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.47
DDB2-213ENST00000617847 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms