RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 CENPQQ7L2Z9 268 aaPredicted RBP22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 LRRC9Q6ZRR7 1453 aa22.9■■□□□ 1.26
AC008878.3-201ENST00000617428 PTMSP20962 102 aa22.89■■□□□ 1.26
AC008878.3-201ENST00000617428 RUNDC1Q96C34 613 aa22.89■■□□□ 1.26
AC008878.3-201ENST00000617428 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.26
AC008878.3-201ENST00000617428 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.25
AC008878.3-201ENST00000617428 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
AC008878.3-201ENST00000617428 FOXD4L5Q5VV16 416 aaPredicted RBP22.88■■□□□ 1.25
AC008878.3-201ENST00000617428 FOXD4L4Q8WXT5 416 aaPredicted RBP22.88■■□□□ 1.25
AC008878.3-201ENST00000617428 CASKIN1Q8WXD9 1431 aa22.88■■□□□ 1.25
AC008878.3-201ENST00000617428 KIF3AQ9Y496 699 aa22.88■■□□□ 1.25
AC008878.3-201ENST00000617428 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
AC008878.3-201ENST00000617428 CUX1P39880 1505 aa22.87■■□□□ 1.25
AC008878.3-201ENST00000617428 DDX19BQ9UMR2 479 aa22.87■■□□□ 1.25
AC008878.3-201ENST00000617428 DZIP1LQ8IYY4 767 aaKnown RBP22.86■■□□□ 1.25
AC008878.3-201ENST00000617428 DIAPH3Q9NSV4 1193 aa22.86■■□□□ 1.25
AC008878.3-201ENST00000617428 MARCH6O60337 910 aa22.86■■□□□ 1.25
AC008878.3-201ENST00000617428 PROSER2Q86WR7 435 aaPredicted RBP22.86■■□□□ 1.25
AC008878.3-201ENST00000617428 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
AC008878.3-201ENST00000617428 SF3A1Q15459 793 aaKnown RBP22.85■■□□□ 1.25
AC008878.3-201ENST00000617428 VPS53Q5VIR6 699 aa22.85■■□□□ 1.25
AC008878.3-201ENST00000617428 KIF21BO75037 1637 aa22.85■■□□□ 1.25
AC008878.3-201ENST00000617428 GNAI1P63096 354 aa22.84■■□□□ 1.25
AC008878.3-201ENST00000617428 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
AC008878.3-201ENST00000617428 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
AC008878.3-201ENST00000617428 IPO9Q96P70 1041 aaKnown RBP22.84■■□□□ 1.25
AC008878.3-201ENST00000617428 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.25
AC008878.3-201ENST00000617428 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
AC008878.3-201ENST00000617428 DEKP35659 375 aaKnown RBP22.83■■□□□ 1.25
AC008878.3-201ENST00000617428 MTHFSP49914 203 aa22.83■■□□□ 1.25
AC008878.3-201ENST00000617428 MIA2Q96PC5 1412 aa22.83■■□□□ 1.25
AC008878.3-201ENST00000617428 IFIT2P09913 472 aaKnown RBP22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 CFTRP13569 1480 aa22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 KIAA2012Q0VF49 1180 aa22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 CREBRFQ8IUR6 639 aa22.82■■□□□ 1.24
AC008878.3-201ENST00000617428 AIMP1Q12904 312 aaKnown RBP22.81■■□□□ 1.24
AC008878.3-201ENST00000617428 LRRFIP1Q32MZ4 808 aaKnown RBP22.81■■□□□ 1.24
AC008878.3-201ENST00000617428 CSPP1Q1MSJ5 1256 aa22.81■■□□□ 1.24
AC008878.3-201ENST00000617428 VPS37DQ86XT2 251 aa22.81■■□□□ 1.24
AC008878.3-201ENST00000617428 SCAPERQ9BY12 1400 aa22.8■■□□□ 1.24
AC008878.3-201ENST00000617428 G3BP1Q13283 466 aaKnown RBP eCLIP22.8■■□□□ 1.24
AC008878.3-201ENST00000617428 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
AC008878.3-201ENST00000617428 TPM4P67936 248 aa22.8■■□□□ 1.24
AC008878.3-201ENST00000617428 APPP05067 770 aa22.79■■□□□ 1.24
AC008878.3-201ENST00000617428 FAM184AQ8NB25 1140 aa22.79■■□□□ 1.24
AC008878.3-201ENST00000617428 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
AC008878.3-201ENST00000617428 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
AC008878.3-201ENST00000617428 H3BQV1 296 aa22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 NOL10Q9BSC4 688 aaKnown RBP22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 AKAP17AQ02040 695 aaKnown RBP22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 RAD21O60216 631 aa22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 TSHZ2Q9NRE2 1034 aa22.78■■□□□ 1.24
AC008878.3-201ENST00000617428 PDE4AP27815 886 aa22.77■■□□□ 1.24
AC008878.3-201ENST00000617428 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
AC008878.3-201ENST00000617428 RIC3Q7Z5B4 369 aa22.77■■□□□ 1.24
AC008878.3-201ENST00000617428 RUFY2Q8WXA3 655 aa22.77■■□□□ 1.24
AC008878.3-201ENST00000617428 FOXD4L6Q3SYB3 417 aaPredicted RBP22.76■■□□□ 1.23
AC008878.3-201ENST00000617428 FOXD4L3Q6VB84 417 aaPredicted RBP22.76■■□□□ 1.23
AC008878.3-201ENST00000617428 SYNE3Q6ZMZ3 975 aa22.76■■□□□ 1.23
AC008878.3-201ENST00000617428 ZKSCAN1P17029 563 aaPredicted RBP22.75■■□□□ 1.23
AC008878.3-201ENST00000617428 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
AC008878.3-201ENST00000617428 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
AC008878.3-201ENST00000617428 CPLX2Q6PUV4 134 aaKnown RBP22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 AMOTL1Q8IY63 956 aa22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 FBXW7Q969H0 707 aa22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 SLC26A8Q96RN1 970 aa22.73■■□□□ 1.23
AC008878.3-201ENST00000617428 REC8O95072 547 aa22.72■■□□□ 1.23
AC008878.3-201ENST00000617428 RRBP1Q9P2E9 1410 aaKnown RBP22.72■■□□□ 1.23
AC008878.3-201ENST00000617428 SLC4A3P48751 1232 aa22.72■■□□□ 1.23
AC008878.3-201ENST00000617428 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
AC008878.3-201ENST00000617428 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
AC008878.3-201ENST00000617428 TRIM34Q9BYJ4 488 aa22.71■■□□□ 1.23
AC008878.3-201ENST00000617428 GOLGA6L3A6NEY3 463 aa22.71■■□□□ 1.23
AC008878.3-201ENST00000617428 STRN4Q9NRL3 753 aa22.7■■□□□ 1.23
AC008878.3-201ENST00000617428 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.23
AC008878.3-201ENST00000617428 CHMP4CQ96CF2 233 aa22.7■■□□□ 1.22
AC008878.3-201ENST00000617428 MCTP1Q6DN14 999 aa22.7■■□□□ 1.22
AC008878.3-201ENST00000617428 ANO2Q9NQ90 1003 aa22.7■■□□□ 1.22
AC008878.3-201ENST00000617428 ROCK1Q13464 1354 aa22.7■■□□□ 1.22
AC008878.3-201ENST00000617428 NEUROD6Q96NK8 337 aa22.7■■□□□ 1.22
AC008878.3-201ENST00000617428 LNPKQ9C0E8 428 aa22.69■■□□□ 1.22
AC008878.3-201ENST00000617428 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
AC008878.3-201ENST00000617428 WASHC2AQ641Q2 1341 aa22.69■■□□□ 1.22
AC008878.3-201ENST00000617428 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 C9orf84Q5VXU9 1444 aa22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 PANK1Q8TE04 598 aa22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
AC008878.3-201ENST00000617428 TRDNQ13061 729 aa22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms